iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131125

Ensembl Protein ID

VIT_15s0048g00960.t01

UniProt Accession

F6I369; F6I369_VITVI

Genbank Protein ID

CCB61386.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596739

Gene Name

VIT_15s0048g00960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_15s0048g00960	VIT_15s0048g00960.t01	VIT_15s0048g00960.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-17	64.0	88	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH dsv++l+f +d + l++++ Dg+++v+ l++ 
   Q: 88   GHGDSVNGLCFsPDgRNLATACADGVVRVYKLDDA 122
           8***********99899*************99775 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDPVLLAAVV SILLGALIAL VFLGNYFLKR RSEVESIFKP ELQSDKNPKP AKPPQSFSKK 60
SQFKHHSHAA DKDQNKRHHP LDINTLKGHG DSVNGLCFSP DGRNLATACA DGVVRVYKLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGACTTTAC CGAATTCTCA ATTCGATTTT CTCTGGTTAC GAATGGATCC GGTTCTTCTG 60
GCGGCGGTGG TCTCGATCCT CCTCGGGGCT CTGATCGCAC TCGTTTTCTT GGGGAACTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane

KEGG

vvi:100243773

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	67.15	4.00e-76	276.00
IUUC-Aml-002212	Ailuropoda melanoleuca	30.06	7.00e-39	154.00
IUUC-Atr-002903	Amborella trichopoda	68.34	9.00e-178	615.00
IUUC-Apl-003635	Anas platyrhynchos	30.10	3.00e-35	141.00
IUUC-Aca-004472	Anolis carolinensis	31.95	9.00e-36	143.00
IUUC-Aly-005761	Arabidopsis lyrata	72.34	0.00e+00	633.00
IUUC-Ath-007476	Arabidopsis thaliana	70.64	0.00e+00	640.00
IUUC-Ame-011221	Astyanax mexicanus	31.68	3.00e-42	164.00
IUUC-Bta-013186	Bos taurus	29.14	2.00e-36	145.00
IUUC-Bdi-014298	Brachypodium distachyon	67.98	1.00e-144	505.00
IUUC-Bol-015192	Brassica oleracea	69.04	0.00e+00	629.00
IUUC-Bra-017078	Brassica rapa	69.79	0.00e+00	632.00
IUUC-Cel-018602	Caenorhabditis elegans	26.69	6.00e-26	110.00
IUUC-Cja-018909	Callithrix jacchus	31.38	4.00e-37	147.00
IUUC-Cfa-020970	Canis familiaris	31.83	8.00e-40	157.00
IUUC-Cpo-022215	Cavia porcellus	29.41	6.00e-37	147.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	41.57	6.00e-37	145.00
IUUC-Csa-023530	Chlorocebus sabaeus	30.28	3.00e-38	152.00
IUUC-Cho-024598	Choloepus hoffmanni	29.62	6.00e-25	107.00
IUUC-Cin-025486	Ciona intestinalis	28.97	9.00e-31	127.00
IUUC-Csv-025930	Ciona savignyi	26.41	4.00e-24	104.00
IUUC-Dre-027507	Danio rerio	30.75	7.00e-40	157.00
IUUC-Dno-029726	Dasypus novemcinctus	29.82	6.00e-36	144.00
IUUC-Dor-030501	Dipodomys ordii	32.43	1.00e-28	119.00
IUUC-Ete-032794	Echinops telfairi	32.74	5.00e-30	123.00
IUUC-Eca-033982	Equus caballus	31.15	8.00e-36	143.00
IUUC-Eeu-035090	Erinaceus europaeus	33.51	9.00e-30	123.00
IUUC-Fca-035944	Felis catus	30.26	1.00e-38	153.00
IUUC-Fal-036992	Ficedula albicollis	30.00	6.00e-35	140.00
IUUC-Gmo-038710	Gadus morhua	31.52	3.00e-40	158.00
IUUC-Gga-040885	Gallus gallus	35.15	6.00e-28	116.00
IUUC-Gac-041922	Gasterosteus aculeatus	30.62	3.00e-39	155.00
IUUC-Gma-043534	Glycine max	73.35	0.00e+00	637.00
IUUC-Ggo-045172	Gorilla gorilla	30.06	7.00e-37	147.00
IUUC-Hsa-045711	Homo sapiens	30.61	2.00e-37	149.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	29.82	7.00e-37	147.00
IUUC-Lch-049739	Latimeria chalumnae	30.67	2.00e-39	156.00
IUUC-Lpe-050795	Leersia perrieri	55.99	3.00e-123	434.00
IUUC-Loc-052113	Lepisosteus oculatus	30.43	1.00e-36	146.00
IUUC-Laf-053751	Loxodonta africana	30.95	2.00e-39	155.00
IUUC-Mcc-055022	Macaca mulatta	30.58	4.00e-38	151.00
IUUC-Meu-056003	Macropus eugenii	29.45	8.00e-38	150.00
IUUC-Mtr-058500	Medicago truncatula	75.79	0.00e+00	628.00
IUUC-Mga-059278	Meleagris gallopavo	36.36	1.00e-28	119.00
IUUC-Mmr-061148	Microcebus murinus	31.50	2.00e-39	155.00
IUUC-Mdo-063002	Monodelphis domestica	29.02	4.00e-31	128.00
IUUC-Mmu-063607	Mus musculus	29.25	7.00e-36	144.00
IUUC-Mac-065359	Musa acuminata	66.59	2.00e-168	584.00
IUUC-Mpu-066323	Mustela putorius furo	30.77	7.00e-38	150.00
IUUC-Mlu-067946	Myotis lucifugus	29.79	9.00e-39	153.00
IUUC-Nle-069019	Nomascus leucogenys	30.61	2.00e-37	149.00
IUUC-Opr-071047	Ochotona princeps	29.97	3.00e-37	148.00
IUUC-Ont-071694	Oreochromis niloticus	33.03	2.00e-41	162.00
IUUC-Ocu-074493	Oryctolagus cuniculus	30.06	3.00e-36	145.00
IUUC-Oba-075468	Oryza barthii	63.13	3.00e-146	510.00
IUUC-Obr-076681	Oryza brachyantha	68.23	3.00e-139	487.00
IUUC-Ogl-077870	Oryza glaberrima	63.13	3.00e-146	510.00
IUUC-Ogu-078536	Oryza glumaepatula	63.13	3.00e-146	510.00
IUUC-Oin-080175	Oryza indica	63.13	3.00e-146	510.00
IUUC-Olo-080796	Oryza longistaminata	68.48	1.00e-142	498.00
IUUC-Oni-082076	Oryza nivara	63.13	3.00e-146	510.00
IUUC-Opu-083267	Oryza punctata	66.50	8.00e-148	515.00
IUUC-Oru-084553	Oryza rufipogon	63.13	3.00e-146	510.00
IUUC-Osa-085389	Oryza sativa	63.13	3.00e-146	510.00
IUUC-Ola-086414	Oryzias latipes	34.47	1.00e-44	172.00
IUUC-Oga-088656	Otolemur garnettii	31.19	3.00e-37	148.00
IUUC-Oar-089719	Ovis aries	31.06	8.00e-37	147.00
IUUC-Ptr-091087	Pan troglodytes	30.61	2.00e-37	149.00
IUUC-Pan-091709	Papio anubis	30.58	4.00e-38	151.00
IUUC-Psi-093265	Pelodiscus sinensis	30.28	3.00e-35	141.00
IUUC-Ppa-095365	Physcomitrella patens	58.91	3.00e-136	477.00
IUUC-Pfo-097494	Poecilia formosa	32.07	2.00e-43	169.00
IUUC-Pab-098362	Pongo abelii	30.91	5.00e-38	150.00
IUUC-Pop-099163	Populus trichocarpa	75.00	0.00e+00	630.00
IUUC-Pca-101019	Procavia capensis	34.57	7.00e-31	127.00
IUUC-Ppe-102101	Prunus persica	77.98	0.00e+00	705.00
IUUC-Pva-102849	Pteropus vampyrus	30.75	5.00e-38	150.00
IUUC-Rno-105511	Rattus norvegicus	29.39	6.00e-36	144.00
IUUC-Sha-107265	Sarcophilus harrisii	28.57	2.00e-35	142.00
IUUC-Smo-108866	Selaginella moellendorffii	57.94	6.00e-124	436.00
IUUC-Sit-110806	Setaria italica	63.51	2.00e-150	524.00
IUUC-Sly-110994	Solanum lycopersicum	71.82	0.00e+00	632.00
IUUC-Stu-112493	Solanum tuberosum	77.86	6.00e-127	445.00
IUUC-Sar-113628	Sorex araneus	31.15	3.00e-36	145.00
IUUC-Sbi-114397	Sorghum bicolor	64.39	2.00e-151	528.00
IUUC-Ssc-116418	Sus scrofa	28.98	2.00e-38	152.00
IUUC-Tgu-117054	Taeniopygia guttata	29.97	4.00e-35	140.00
IUUC-Tru-118504	Takifugu rubripes	30.91	9.00e-45	173.00
IUUC-Tni-120254	Tetraodon nigroviridis	31.67	5.00e-43	167.00
IUUC-Tca-121085	Theobroma cacao	75.17	0.00e+00	665.00
IUUC-Tae-124791	Triticum aestivum	66.94	6.00e-144	503.00
IUUC-Tur-126756	Triticum urartu	59.20	1.00e-125	442.00
IUUC-Tbe-127903	Tupaia belangeri	30.67	3.00e-36	145.00
IUUC-Ttr-129118	Tursiops truncatus	30.52	6.00e-40	157.00
IUUC-Xtr-132287	Xenopus tropicalis	31.78	6.00e-38	150.00
IUUC-Xma-134246	Xiphophorus maculatus	32.07	7.00e-43	167.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence