iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nle-069492

Ensembl Protein ID

ENSNLEP00000013372.1

UniProt Accession

G1RJG5; G1RJG5_NOMLE

Genbank Protein ID

ENSNLEP00000013372

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01105202

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000026790.1	ENSNLET00000014028.1	ENSNLEP00000013372.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-17	60.9	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAGCCC ATCAGCTGCC ACGCCTGGAA CAAGGACCGC 60
ACCCGTGAGT GCCTGCTGGG GGCCGGTGGG TGGCTGCTTC CACCTCCTGG GATGGGGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001709	Ailuropoda melanoleuca	81.94	2.00e-172	598.00
IUUC-Bta-012442	Bos taurus	82.23	5.00e-171	593.00
IUUC-Cja-019899	Callithrix jacchus	83.11	3.00e-179	620.00
IUUC-Cfa-020067	Canis familiaris	81.48	6.00e-171	593.00
IUUC-Cpo-022461	Cavia porcellus	84.13	1.00e-173	602.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.20	2.00e-35	141.00
IUUC-Dor-030559	Dipodomys ordii	82.01	3.00e-173	600.00
IUUC-Ete-032299	Echinops telfairi	80.16	5.00e-175	606.00
IUUC-Eca-033593	Equus caballus	81.53	3.00e-170	590.00
IUUC-Fca-036254	Felis catus	83.07	1.00e-173	602.00
IUUC-Fal-037453	Ficedula albicollis	75.79	3.00e-164	571.00
IUUC-Gga-040898	Gallus gallus	75.93	1.00e-165	575.00
IUUC-Ggo-045355	Gorilla gorilla	69.13	3.00e-130	457.00
IUUC-Hsa-046623	Homo sapiens	84.92	8.00e-176	609.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	83.07	2.00e-175	608.00
IUUC-Laf-054287	Loxodonta africana	80.63	5.00e-165	573.00
IUUC-Meu-056302	Macropus eugenii	77.51	2.00e-168	585.00
IUUC-Mga-059279	Meleagris gallopavo	75.93	6.00e-166	576.00
IUUC-Mmr-060752	Microcebus murinus	82.56	2.00e-169	588.00
IUUC-Mdo-062836	Monodelphis domestica	73.81	1.00e-156	545.00
IUUC-Mmu-064099	Mus musculus	82.20	2.00e-172	598.00
IUUC-Mpu-066247	Mustela putorius furo	82.01	6.00e-167	579.00
IUUC-Mlu-067571	Myotis lucifugus	82.28	3.00e-177	613.00
IUUC-Oan-072692	Ornithorhynchus anatinus	76.19	7.00e-166	576.00
IUUC-Ocu-074187	Oryctolagus cuniculus	78.84	6.00e-167	579.00
IUUC-Oga-088610	Otolemur garnettii	83.07	2.00e-173	601.00
IUUC-Oar-089639	Ovis aries	83.74	1.00e-171	595.00
IUUC-Ptr-091023	Pan troglodytes	84.66	4.00e-175	607.00
IUUC-Pan-091727	Papio anubis	84.39	9.00e-178	615.00
IUUC-Pab-098238	Pongo abelii	84.66	2.00e-176	611.00
IUUC-Pop-099386	Populus trichocarpa	52.38	3.00e-34	136.00
IUUC-Pca-100580	Procavia capensis	81.87	3.00e-168	583.00
IUUC-Pva-102928	Pteropus vampyrus	79.89	2.00e-161	561.00
IUUC-Rno-104846	Rattus norvegicus	83.07	2.00e-173	601.00
IUUC-Ttr-128698	Tursiops truncatus	82.28	3.00e-172	597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence