iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099987

Ensembl Protein ID

POPTR_0001s43980.1

UniProt Accession

U5GUA5; U5GUA5_POPTR

Genbank Protein ID

ERP67148.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_730261; POPTR_0001s43980g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s43980	POPTR_0001s43980.1	POPTR_0001s43980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-21	75.0	110	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           Ht  v++l++  s  +ll+s++ D t+ vW++
   Q: 110  HTKAVNALDWspSHaHLLASAGMDQTVCVWNV 141
           999********76699**************96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLLCHAYSN SSDEEPEPEP ESESKPEYGP EFRPFIPPPP KRFKPETPSQ NFRTEAPVPG 60
RYISKRERAL SAQSPRVPNP ATNPNLNPNP PGRASLSQIP KRLAVDLRSH TKAVNALDWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTTC TCTGCCACGC ATACTCTAAT TCCTCAGATG AAGAACCCGA ACCCGAACCC 60
GAATCCGAAT CCAAACCCGA ATACGGACCC GAATTCAGAC CCTTCATCCC CCCTCCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s43980g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	53.06	7.00e-53	201.00
IUUC-Aml-001588	Ailuropoda melanoleuca	40.19	4.00e-70	258.00
IUUC-Atr-003155	Amborella trichopoda	61.25	3.00e-136	477.00
IUUC-Apl-003544	Anas platyrhynchos	43.60	9.00e-56	209.00
IUUC-Aly-006510	Arabidopsis lyrata	60.11	2.00e-135	475.00
IUUC-Ath-007329	Arabidopsis thaliana	60.90	2.00e-136	478.00
IUUC-Ame-010607	Astyanax mexicanus	39.90	5.00e-45	173.00
IUUC-Bta-013542	Bos taurus	38.92	1.00e-67	250.00
IUUC-Bdi-014736	Brachypodium distachyon	57.87	2.00e-129	455.00
IUUC-Bol-016112	Brassica oleracea	55.88	1.00e-136	479.00
IUUC-Bra-016685	Brassica rapa	56.92	1.00e-137	482.00
IUUC-Cja-018883	Callithrix jacchus	38.92	9.00e-67	247.00
IUUC-Cfa-021278	Canis familiaris	39.17	1.00e-69	256.00
IUUC-Cpo-022449	Cavia porcellus	38.92	4.00e-66	244.00
IUUC-Csa-023916	Chlorocebus sabaeus	38.61	2.00e-67	249.00
IUUC-Csv-026371	Ciona savignyi	27.16	9.00e-33	133.00
IUUC-Eca-033484	Equus caballus	40.51	3.00e-68	252.00
IUUC-Fca-035673	Felis catus	40.19	1.00e-69	256.00
IUUC-Fal-036795	Ficedula albicollis	38.73	2.00e-72	265.00
IUUC-Gmo-039062	Gadus morhua	36.13	4.00e-52	197.00
IUUC-Gga-040773	Gallus gallus	42.08	1.00e-63	236.00
IUUC-Gac-042364	Gasterosteus aculeatus	37.00	1.00e-56	212.00
IUUC-Gma-043100	Glycine max	61.48	1.00e-141	495.00
IUUC-Ggo-045220	Gorilla gorilla	38.61	1.00e-67	250.00
IUUC-Hsa-046511	Homo sapiens	38.61	2.00e-67	249.00
IUUC-Hvu-047431	Hordeum vulgare	65.05	5.00e-124	436.00
IUUC-Lch-049590	Latimeria chalumnae	40.66	6.00e-64	236.00
IUUC-Lpe-050810	Leersia perrieri	66.91	1.00e-100	359.00
IUUC-Loc-052196	Lepisosteus oculatus	40.45	1.00e-73	269.00
IUUC-Mcc-055622	Macaca mulatta	38.29	7.00e-67	247.00
IUUC-Mtr-058041	Medicago truncatula	71.61	4.00e-134	470.00
IUUC-Mga-060149	Meleagris gallopavo	43.06	9.00e-56	209.00
IUUC-Mmr-061552	Microcebus murinus	39.81	5.00e-67	248.00
IUUC-Mdo-061969	Monodelphis domestica	38.92	1.00e-69	256.00
IUUC-Mmu-063343	Mus musculus	38.85	1.00e-67	250.00
IUUC-Mac-065079	Musa acuminata	70.89	1.00e-130	459.00
IUUC-Mpu-065949	Mustela putorius furo	39.37	1.00e-49	190.00
IUUC-Mlu-067523	Myotis lucifugus	38.11	4.00e-46	178.00
IUUC-Ont-072361	Oreochromis niloticus	37.90	1.00e-67	249.00
IUUC-Oba-075367	Oryza barthii	66.33	3.00e-117	414.00
IUUC-Obr-076738	Oryza brachyantha	67.30	3.00e-122	431.00
IUUC-Ogu-078590	Oryza glumaepatula	66.33	3.00e-117	414.00
IUUC-Oin-079678	Oryza indica	66.03	5.00e-124	437.00
IUUC-Olo-080453	Oryza longistaminata	66.43	8.00e-114	402.00
IUUC-Ome-081794	Oryza meridionalis	68.42	8.00e-101	359.00
IUUC-Oni-082432	Oryza nivara	66.03	5.00e-124	437.00
IUUC-Opu-083897	Oryza punctata	65.71	8.00e-122	429.00
IUUC-Oru-085068	Oryza rufipogon	63.99	1.00e-114	405.00
IUUC-Osa-085805	Oryza sativa	65.71	5.00e-124	437.00
IUUC-Ola-087567	Oryzias latipes	38.17	2.00e-59	221.00
IUUC-Oga-088168	Otolemur garnettii	39.87	3.00e-67	248.00
IUUC-Oar-090158	Ovis aries	37.46	2.00e-59	223.00
IUUC-Ptr-090913	Pan troglodytes	31.65	3.00e-48	185.00
IUUC-Pan-092157	Papio anubis	38.61	2.00e-67	249.00
IUUC-Psi-093817	Pelodiscus sinensis	41.76	5.00e-63	233.00
IUUC-Pma-094263	Petromyzon marinus	38.76	2.00e-38	150.00
IUUC-Ppa-095302	Physcomitrella patens	46.56	1.00e-103	369.00
IUUC-Pfo-097526	Poecilia formosa	38.85	3.00e-67	248.00
IUUC-Pab-098152	Pongo abelii	38.63	7.00e-56	211.00
IUUC-Ppe-101575	Prunus persica	68.09	4.00e-164	570.00
IUUC-Pva-102942	Pteropus vampyrus	40.51	5.00e-68	251.00
IUUC-Rno-104857	Rattus norvegicus	39.17	4.00e-68	251.00
IUUC-Sha-106763	Sarcophilus harrisii	39.56	2.00e-69	256.00
IUUC-Sit-110488	Setaria italica	56.95	3.00e-118	417.00
IUUC-Sly-110893	Solanum lycopersicum	58.60	4.00e-133	467.00
IUUC-Stu-112566	Solanum tuberosum	58.82	2.00e-134	471.00
IUUC-Sar-113617	Sorex araneus	40.00	3.00e-27	115.00
IUUC-Sbi-114566	Sorghum bicolor	55.16	3.00e-124	437.00
IUUC-Tgu-117015	Taeniopygia guttata	39.05	1.00e-72	265.00
IUUC-Tca-121587	Theobroma cacao	70.09	1.00e-157	548.00
IUUC-Tae-123717	Triticum aestivum	64.40	7.00e-124	436.00
IUUC-Tur-126075	Triticum urartu	59.54	4.00e-56	211.00
IUUC-Tbe-127502	Tupaia belangeri	31.96	7.00e-44	171.00
IUUC-Ttr-129033	Tursiops truncatus	39.56	6.00e-69	254.00
IUUC-Vvi-131505	Vitis vinifera	65.89	1.00e-159	555.00
IUUC-Xtr-132851	Xenopus tropicalis	41.15	1.00e-50	192.00
IUUC-Xma-133463	Xiphophorus maculatus	37.90	5.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence