iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121587

Ensembl Protein ID

EOY12662

UniProt Accession

A0A061F7M7; A0A061F7M7_THECC

Genbank Protein ID

EOY12662.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001885

Gene Name

TCM_031173

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_031173	EOY12663	EOY12663
TCM_031173	EOY12662	EOY12662

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-22	80.1	133	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           gH+  v+++++ ++  +ll+s++ D ti +W++
   Q: 133  GHAKAVNAVHWsPThaHLLASAGMDQTICIWNV 165
           8999********544899*************96 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDLLCKAYSN ISDDEPESEP EPKPVNYNYH PPRPSKRRKP EYPFPMVDLQ KREEAPVPGR 60
YISKRERALS GSVPRAAEPN LSQNDPHFIP QPGLGSISDL DLPHHILSSL QHKPKAHTQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAAAATCA TTTATCCAAC TTCAAAATAT AGAAATCAAT AAGATGAACA TTGGCCCATA 60
CTGGTTGATA TATTAGGGGT TCATTTAGCA AAACTAGGGC TTGTAAATCA CCTTTGGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	45.39	5.00e-56	212.00
IUUC-Aml-001588	Ailuropoda melanoleuca	34.30	9.00e-68	250.00
IUUC-Atr-003155	Amborella trichopoda	66.67	3.00e-155	540.00
IUUC-Apl-003544	Anas platyrhynchos	40.76	5.00e-56	209.00
IUUC-Aly-006510	Arabidopsis lyrata	63.13	3.00e-149	520.00
IUUC-Ath-007329	Arabidopsis thaliana	64.19	4.00e-153	533.00
IUUC-Ame-010607	Astyanax mexicanus	40.85	8.00e-48	182.00
IUUC-Bta-013542	Bos taurus	33.33	1.00e-65	243.00
IUUC-Bdi-014736	Brachypodium distachyon	58.36	4.00e-131	460.00
IUUC-Bol-016112	Brassica oleracea	57.81	2.00e-147	514.00
IUUC-Bra-016685	Brassica rapa	57.96	1.00e-145	508.00
IUUC-Cja-018883	Callithrix jacchus	33.85	2.00e-67	249.00
IUUC-Cfa-021278	Canis familiaris	37.06	4.00e-67	248.00
IUUC-Cpo-022449	Cavia porcellus	36.42	3.00e-63	234.00
IUUC-Csa-023916	Chlorocebus sabaeus	35.22	5.00e-66	244.00
IUUC-Cin-025210	Ciona intestinalis	34.10	1.00e-39	155.00
IUUC-Csv-026371	Ciona savignyi	30.56	4.00e-36	144.00
IUUC-Eca-033484	Equus caballus	37.38	5.00e-66	244.00
IUUC-Fca-035673	Felis catus	37.06	5.00e-67	247.00
IUUC-Fal-036795	Ficedula albicollis	36.71	6.00e-72	263.00
IUUC-Gmo-039062	Gadus morhua	35.79	1.00e-51	195.00
IUUC-Gga-040773	Gallus gallus	40.54	3.00e-64	237.00
IUUC-Gac-042364	Gasterosteus aculeatus	37.60	2.00e-56	211.00
IUUC-Gma-043100	Glycine max	66.67	7.00e-158	549.00
IUUC-Ggo-045220	Gorilla gorilla	35.22	5.00e-66	244.00
IUUC-Hsa-046511	Homo sapiens	35.22	8.00e-66	243.00
IUUC-Hvu-047431	Hordeum vulgare	61.36	4.00e-126	443.00
IUUC-Lch-049590	Latimeria chalumnae	40.46	6.00e-65	239.00
IUUC-Lpe-050810	Leersia perrieri	64.81	1.00e-98	352.00
IUUC-Loc-052196	Lepisosteus oculatus	37.53	1.00e-74	273.00
IUUC-Mcc-055622	Macaca mulatta	34.91	2.00e-65	242.00
IUUC-Mtr-058041	Medicago truncatula	72.46	1.00e-145	508.00
IUUC-Mga-060149	Meleagris gallopavo	42.11	2.00e-56	211.00
IUUC-Mmr-061552	Microcebus murinus	37.11	4.00e-66	244.00
IUUC-Mdo-061969	Monodelphis domestica	37.26	1.00e-69	256.00
IUUC-Mmu-063343	Mus musculus	36.74	4.00e-65	241.00
IUUC-Mac-065079	Musa acuminata	65.33	7.00e-137	479.00
IUUC-Mpu-065949	Mustela putorius furo	37.30	4.00e-49	188.00
IUUC-Mlu-067523	Myotis lucifugus	33.24	7.00e-49	187.00
IUUC-Ont-072361	Oreochromis niloticus	38.71	1.00e-68	253.00
IUUC-Oba-075367	Oryza barthii	60.39	2.00e-122	432.00
IUUC-Obr-076738	Oryza brachyantha	60.64	6.00e-125	439.00
IUUC-Ogu-078590	Oryza glumaepatula	60.66	5.00e-123	433.00
IUUC-Oin-079678	Oryza indica	60.64	2.00e-129	454.00
IUUC-Olo-080453	Oryza longistaminata	66.06	7.00e-113	399.00
IUUC-Ome-081794	Oryza meridionalis	61.36	7.00e-107	379.00
IUUC-Oni-082432	Oryza nivara	60.64	2.00e-129	454.00
IUUC-Opu-083897	Oryza punctata	60.64	4.00e-127	447.00
IUUC-Oru-085068	Oryza rufipogon	58.06	1.00e-118	419.00
IUUC-Osa-085805	Oryza sativa	60.90	1.00e-129	455.00
IUUC-Ola-087567	Oryzias latipes	38.37	9.00e-60	222.00
IUUC-Oga-088168	Otolemur garnettii	34.11	4.00e-65	241.00
IUUC-Oar-090158	Ovis aries	35.46	6.00e-59	221.00
IUUC-Ptr-090913	Pan troglodytes	29.56	4.00e-47	181.00
IUUC-Pan-092157	Papio anubis	35.22	5.00e-66	244.00
IUUC-Psi-093817	Pelodiscus sinensis	39.77	7.00e-64	236.00
IUUC-Pma-094263	Petromyzon marinus	40.36	1.00e-38	151.00
IUUC-Ppa-095302	Physcomitrella patens	49.08	9.00e-109	385.00
IUUC-Pfo-097526	Poecilia formosa	35.92	3.00e-68	251.00
IUUC-Pab-098152	Pongo abelii	35.36	8.00e-55	207.00
IUUC-Pop-099987	Populus trichocarpa	73.75	1.00e-162	565.00
IUUC-Ppe-101575	Prunus persica	66.67	2.00e-166	577.00
IUUC-Pva-102942	Pteropus vampyrus	38.34	2.00e-67	249.00
IUUC-Rno-104857	Rattus norvegicus	36.74	4.00e-65	241.00
IUUC-Sha-106763	Sarcophilus harrisii	34.43	1.00e-69	256.00
IUUC-Sit-110488	Setaria italica	58.67	3.00e-122	431.00
IUUC-Sly-110893	Solanum lycopersicum	61.74	2.00e-147	514.00
IUUC-Stu-112566	Solanum tuberosum	61.52	2.00e-146	511.00
IUUC-Sar-113617	Sorex araneus	39.71	7.00e-28	117.00
IUUC-Sbi-114566	Sorghum bicolor	57.18	1.00e-128	452.00
IUUC-Tgu-117015	Taeniopygia guttata	37.03	3.00e-72	264.00
IUUC-Tae-123717	Triticum aestivum	59.25	2.00e-130	458.00
IUUC-Tur-126075	Triticum urartu	60.69	4.00e-58	217.00
IUUC-Tbe-127502	Tupaia belangeri	29.71	6.00e-42	164.00
IUUC-Ttr-129033	Tursiops truncatus	37.06	1.00e-66	246.00
IUUC-Vvi-131505	Vitis vinifera	73.94	4.00e-166	576.00
IUUC-Xtr-132851	Xenopus tropicalis	42.58	3.00e-54	203.00
IUUC-Xma-133463	Xiphophorus maculatus	35.84	2.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence