• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105056
Ensembl Protein ID ENSRNOP00000021952.6
UniProt Accession D4A9J4; D4A9J4_RAT
Genbank Protein ID ENSRNOP00000021952
Protein Name Histone-lysine N-methyltransferase
Genbank Nucleotide ID AABR07072416
Gene Name Whsc1; Nsd2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000038140.3 ENSRNOT00000021952.6 ENSRNOP00000021952.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
CPLMdbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 1.30e-15 57.7 814 854
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C vC +gg+    l++Ce C  +fHp+Cl+++    +p+ + w+C++Cr
   Q: 814  WCFVCSKGGS----LLCCEACPAAFHPDCLSIE----MPDGS-WFCNDCR 854
           8*********....*******************....9***8.******8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MKQAPEILGS ANGKTQNCEV NHECSVFLSK AQLSNSLQEG VMQKFNGHDA LPFLPAEKLK 60
DLTSCVFNGE PGAHDTKLCF ETQEVKGIGT PPNTTPIKNG SPEIKLKITK TYMNGKPLFE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105056|E3,PHD|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAAGCAGG CACCAGAAAT CCTTGGCAGT GCAAATGGAA AGACTCAGAA CTGTGAAGTG 60
AATCACGAAT GTTCTGTATT CCTCAGCAAA GCTCAGCTTT CTAACAGCCT ACAGGAGGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105056|E3,PHD|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR006560--AWS_dom
IPR009071--HMG_box_dom
IPR003616--Post-SET_dom
IPR000313--PWWP_dom
IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51215--AWS
PS50118--HMG_BOX_2
PS50868--POST_SET
PS50812--PWWP
PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2
Pfam

PF00505--HMG_box
PF00855--PWWP
PF00856--SET
SMART

SM00570--AWS
SM00398--HMG
SM00249--PHD
SM00508--PostSET
SM00293--PWWP
SM00317--SET
Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0018024--F:histone-lysine N-methyltransferase activity
GO:0043565--F:sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0003289--P:atrial septum primum morphogenesis
GO:0003290--P:atrial septum secundum morphogenesis
GO:0060348--P:bone development
GO:0010452--P:histone H3-K36 methylation
GO:0034770--P:histone H4-K20 methylation
GO:0003149--P:membranous septum morphogenesis
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0048298--P:positive regulation of isotype switching to IgA isotypes
GO:2001032--P:regulation of double-strand break repair via nonhomologous end joining
GO:0070201--P:regulation of establishment of protein localization
KEGG rno:680537
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002181 Ailuropoda melanoleuca 90.10 0.00e+00 2370.00
IUUC-Apl-003677 Anas platyrhynchos 79.64 0.00e+00 2079.00
IUUC-Aca-004278 Anolis carolinensis 75.22 0.00e+00 1407.00
IUUC-Ame-011932 Astyanax mexicanus 70.69 0.00e+00 1026.00
IUUC-Bta-012522 Bos taurus 84.68 0.00e+00 2192.00
IUUC-Cja-018908 Callithrix jacchus 89.93 0.00e+00 2258.00
IUUC-Cfa-020894 Canis familiaris 88.81 0.00e+00 2381.00
IUUC-Cpo-021982 Cavia porcellus 88.44 0.00e+00 2326.00
IUUC-Csa-023807 Chlorocebus sabaeus 90.60 0.00e+00 2298.00
IUUC-Cho-024405 Choloepus hoffmanni 69.95 0.00e+00 696.00
IUUC-Csv-026298 Ciona savignyi 37.70 2.00e-57 216.00
IUUC-Dre-027492 Danio rerio 71.18 0.00e+00 1057.00
IUUC-Dno-030020 Dasypus novemcinctus 85.58 0.00e+00 2032.00
IUUC-Dor-031103 Dipodomys ordii 84.35 0.00e+00 2172.00
IUUC-Ete-032488 Echinops telfairi 80.31 0.00e+00 2030.00
IUUC-Eca-034066 Equus caballus 90.56 0.00e+00 2399.00
IUUC-Eeu-035199 Erinaceus europaeus 70.27 0.00e+00 748.00
IUUC-Fca-035434 Felis catus 85.11 0.00e+00 1948.00
IUUC-Fal-037113 Ficedula albicollis 77.44 0.00e+00 2088.00
IUUC-Gmo-039686 Gadus morhua 70.02 0.00e+00 1008.00
IUUC-Gga-040273 Gallus gallus 77.70 0.00e+00 2048.00
IUUC-Gac-042123 Gasterosteus aculeatus 66.80 0.00e+00 1057.00
IUUC-Ggo-044643 Gorilla gorilla 90.45 0.00e+00 2322.00
IUUC-Hsa-046380 Homo sapiens 90.73 0.00e+00 2294.00
IUUC-Itr-048658 Ictidomys tridecemlineatus 92.01 0.00e+00 1447.00
IUUC-Lch-050217 Latimeria chalumnae 67.15 0.00e+00 1732.00
IUUC-Loc-052766 Lepisosteus oculatus 68.69 0.00e+00 1134.00
IUUC-Laf-053780 Loxodonta africana 87.44 0.00e+00 2340.00
IUUC-Mcc-054928 Macaca mulatta 90.60 0.00e+00 2331.00
IUUC-Meu-056184 Macropus eugenii 73.96 0.00e+00 775.00
IUUC-Mga-059576 Meleagris gallopavo 78.49 0.00e+00 2055.00
IUUC-Mmr-061045 Microcebus murinus 89.90 0.00e+00 2366.00
IUUC-Mdo-062576 Monodelphis domestica 81.68 0.00e+00 2140.00
IUUC-Mmu-063640 Mus musculus 97.09 0.00e+00 2547.00
IUUC-Mac-065303 Musa acuminata 28.04 4.00e-11 63.50
IUUC-Mpu-066512 Mustela putorius furo 89.38 0.00e+00 2353.00
IUUC-Mlu-067280 Myotis lucifugus 78.65 0.00e+00 1086.00
IUUC-Nle-069896 Nomascus leucogenys 90.84 0.00e+00 2214.00
IUUC-Ont-072197 Oreochromis niloticus 72.85 0.00e+00 1031.00
IUUC-Oan-072724 Ornithorhynchus anatinus 78.17 0.00e+00 1356.00
IUUC-Ocu-074758 Oryctolagus cuniculus 87.80 0.00e+00 2223.00
IUUC-Ogl-077641 Oryza glaberrima 28.49 1.00e-10 60.80
IUUC-Ogu-078898 Oryza glumaepatula 28.49 1.00e-10 60.80
IUUC-Oin-079557 Oryza indica 28.49 1.00e-10 60.80
IUUC-Olo-080702 Oryza longistaminata 41.94 2.00e-45 178.00
IUUC-Opu-083371 Oryza punctata 42.31 5.00e-47 183.00
IUUC-Osa-085353 Oryza sativa 28.49 1.00e-10 60.80
IUUC-Oga-088702 Otolemur garnettii 89.45 0.00e+00 2033.00
IUUC-Oar-089736 Ovis aries 79.26 0.00e+00 1924.00
IUUC-Ptr-091055 Pan troglodytes 90.65 0.00e+00 2291.00
IUUC-Pan-092752 Papio anubis 94.88 0.00e+00 1415.00
IUUC-Psi-093620 Pelodiscus sinensis 80.00 0.00e+00 2103.00
IUUC-Pfo-097464 Poecilia formosa 64.73 0.00e+00 1054.00
IUUC-Pab-098051 Pongo abelii 90.58 0.00e+00 2323.00
IUUC-Pop-099927 Populus trichocarpa 28.93 8.00e-12 65.90
IUUC-Pca-100273 Procavia capensis 87.72 0.00e+00 2300.00
IUUC-Pva-102473 Pteropus vampyrus 77.33 0.00e+00 1896.00
IUUC-Sha-107494 Sarcophilus harrisii 81.91 0.00e+00 2147.00
IUUC-Sar-113310 Sorex araneus 88.33 0.00e+00 1836.00
IUUC-Sbi-114581 Sorghum bicolor 35.19 4.00e-10 58.50
IUUC-Ssc-116344 Sus scrofa 83.84 0.00e+00 2192.00
IUUC-Tgu-116786 Taeniopygia guttata 78.98 0.00e+00 2075.00
IUUC-Tru-117638 Takifugu rubripes 50.45 0.00e+00 1222.00
IUUC-Tsy-118937 Tarsius syrichta 95.02 0.00e+00 1538.00
IUUC-Tni-120452 Tetraodon nigroviridis 62.77 0.00e+00 1041.00
IUUC-Tae-125237 Triticum aestivum 29.45 9.00e-08 50.80
IUUC-Tbe-127291 Tupaia belangeri 86.08 0.00e+00 1510.00
IUUC-Ttr-129017 Tursiops truncatus 80.72 0.00e+00 1705.00
IUUC-Xtr-132673 Xenopus tropicalis 67.10 0.00e+00 1756.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved