iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkkeaee...fsgy 87
           tGl+N      C++N ++Q+L+n++ +r  +l++ +++ ++      + ++++sl ++f++l     +++++ v+p++l  al+++ +    f++ 
   Q: 1275 TGLQNEvgEYNCFLNVIIQSLWNLELFRAEFLRSSTREHHH----VGDPCVVCSLYEIFTALSaassEKQNEPVAPSSLRIALSNLYPDssfFQEA 1366
           57888733347**********************55555544....456789999999999997777688899*******9999999887556889* PP
   S: 88   eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetk 183
           + +Da+E+la+++d l++++   +++++++  ++d    s+   + +    +++ + lF++ + +q+ c +c+ +s r+ + +++  +++ +  + 
   Q: 1367 QMNDASEVLAVIFDCLHRSF--AQSSSVSDVDSSD----SNCTGSWDCANRTCIAHSLFGMDIFEQLNCYSCGLES-RHLKYTSFFHNINASALRT 1455
           ********************..3444444444444....3344555778888*********************998.6667788888888555544 PP
   S: 184  ke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqk 273
           ++      s++++L+    +++l ++   ++  c k+      + l++ P+v++  L + +  e   ++    +   ++ e+d+s +        +
   Q: 1456 MKvtcaenSFDELLNLVEMNHQLACD--PETGGCGKLN--HIHHILTTPPHVFTTVLGWQNTCE--TVEDIAATLAALNTEIDISIMYRG----LD 1541
           44555555999999999999999986..5788888777..45678999***********95444..677788888888889***954444....33 PP
   S: 274  ekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg...staYvlfYkr 337
            k +Y+L++vv+++G     HY++++ +++++ W+ +dD++V+++ ++ +vl++++    ++ vl+Y+r
   Q: 1542 PKSTYSLVSVVCYYG----QHYHCFAHSREHDqWIMYDDKTVKVIgSWIDVLSMCErghLQPQVLLYER 1606
           489************....9******9965555************7799***99988888899999988 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGQKKKTSAS RSKQPPSSTA VTVVEVEPSE ISACSFNDGG FSGPDANGEP LDSSVVKLEC 60
EKALKSFGRG SYNKAIRLIK DSCSRHQDSA LIHRVQGTIC VKVAAVYEDL ATKQKYLRNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTGGCATT TCGGTTTAAT GATTATTTTC CCCTGGCTTC GAACTCCACA CAGAGAGCAA 60
AACGACGACT CTTGTTCTAC TCTCTCTATC TTGTTCCCCA CACCAGCTTT CTCCGCCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR007330--MIT
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

ath:AT3G47910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	47.60	3.00e-60	225.00
IUUC-Atr-002451	Amborella trichopoda	45.71	0.00e+00	792.00
IUUC-Aly-005468	Arabidopsis lyrata	90.10	0.00e+00	2808.00
IUUC-Bta-013344	Bos taurus	32.49	3.00e-42	167.00
IUUC-Bdi-015058	Brachypodium distachyon	37.21	3.00e-157	549.00
IUUC-Cin-025752	Ciona intestinalis	30.22	4.00e-12	62.80
IUUC-Eca-033235	Equus caballus	32.20	5.00e-42	166.00
IUUC-Fca-036070	Felis catus	31.09	1.00e-42	168.00
IUUC-Gga-041241	Gallus gallus	32.20	1.00e-42	169.00
IUUC-Hvu-047657	Hordeum vulgare	44.55	2.00e-145	509.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	32.49	2.00e-42	168.00
IUUC-Loc-052615	Lepisosteus oculatus	34.01	5.00e-41	163.00
IUUC-Mcc-054696	Macaca mulatta	32.49	2.00e-42	168.00
IUUC-Mmr-060701	Microcebus murinus	32.49	3.00e-42	167.00
IUUC-Mdo-062433	Monodelphis domestica	32.01	6.00e-41	163.00
IUUC-Mpu-066404	Mustela putorius furo	32.49	2.00e-42	168.00
IUUC-Mlu-067841	Myotis lucifugus	32.49	2.00e-42	168.00
IUUC-Ocu-074729	Oryctolagus cuniculus	32.49	1.00e-42	168.00
IUUC-Obr-076268	Oryza brachyantha	59.85	2.00e-139	489.00
IUUC-Olo-080872	Oryza longistaminata	56.01	6.00e-122	432.00
IUUC-Osa-085583	Oryza sativa	60.61	3.00e-138	484.00
IUUC-Pma-094745	Petromyzon marinus	29.95	4.00e-34	138.00
IUUC-Pab-097979	Pongo abelii	32.49	2.00e-42	168.00
IUUC-Pca-101005	Procavia capensis	30.63	7.00e-25	109.00
IUUC-Ppe-101918	Prunus persica	58.57	0.00e+00	1689.00
IUUC-Pva-103125	Pteropus vampyrus	32.20	5.00e-42	166.00
IUUC-Sha-107164	Sarcophilus harrisii	32.29	5.00e-42	166.00
IUUC-Sly-111258	Solanum lycopersicum	55.45	0.00e+00	1648.00
IUUC-Stu-112904	Solanum tuberosum	56.83	0.00e+00	1587.00
IUUC-Sbi-114345	Sorghum bicolor	40.62	2.00e-170	592.00
IUUC-Tru-117981	Takifugu rubripes	30.00	3.00e-36	145.00
IUUC-Tae-125619	Triticum aestivum	44.71	5.00e-145	508.00
IUUC-Tur-126027	Triticum urartu	44.87	4.00e-145	509.00
IUUC-Vpa-130213	Vicugna pacos	32.49	3.00e-42	167.00
IUUC-Vvi-131652	Vitis vinifera	59.97	0.00e+00	1736.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence