iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115611

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU856276

Gene Name

BARD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000016170.2	ENSSSCT00000017605.2	ENSSSCP00000017127.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	24.50	1.00e-12	71.60	IUUC-Cel-018312
E3 activity/RING/RING	81.06	0.00e+00	1218.00	IUUC-Hsa-045826

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

GGAMPGNRLP RVRSGNEPHP APSMEPAGRG AWAHSRAALA RLEKLLRCSR CTDILREPVC 60
LGGCEHIFCS NCISDCFGSG CPVCYTPAWI QDVKINRQLD SMIQLCSKLR NLLHDADSSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGGGGCGA TGCCGGGGAA CCGGCTGCCG AGGGTCCGCT CCGGGAACGA GCCTCATCCC 60
GCGCCCTCCA TGGAGCCGGC GGGTCGCGGG GCCTGGGCCC ACAGCCGCGC CGCGCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR033097--BARD1
IPR001357--BRCT_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12796--Ank_2

PRINTS

PR01415--ANKYRIN

SMART

SM00248--ANK
SM00292--BRCT

Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0031436--C:BRCA1-BARD1 complex
GO:0016607--C:nuclear speck
GO:0000932--C:P-body
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043066--P:negative regulation of apoptotic process
GO:0046826--P:negative regulation of protein export from nucleus
GO:0043065--P:positive regulation of apoptotic process
GO:0085020--P:protein K6-linked ubiquitination
GO:0042325--P:regulation of phosphorylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000225	Aegilops tauschii	34.69	3.00e-19	90.90
IUUC-Aml-002346	Ailuropoda melanoleuca	80.46	0.00e+00	1128.00
IUUC-Atr-002625	Amborella trichopoda	31.25	3.00e-22	100.00
IUUC-Apl-004108	Anas platyrhynchos	68.06	5.00e-141	494.00
IUUC-Aca-005387	Anolis carolinensis	47.70	0.00e+00	650.00
IUUC-Ath-006986	Arabidopsis thaliana	37.50	4.00e-23	103.00
IUUC-Ame-011716	Astyanax mexicanus	54.55	8.00e-62	231.00
IUUC-Bta-013417	Bos taurus	82.41	0.00e+00	1174.00
IUUC-Bdi-014760	Brachypodium distachyon	31.38	9.00e-22	99.00
IUUC-Bol-016476	Brassica oleracea	37.75	3.00e-20	94.00
IUUC-Bra-017176	Brassica rapa	36.47	3.00e-23	103.00
IUUC-Cel-018312	Caenorhabditis elegans	24.50	2.00e-13	70.90
IUUC-Cja-019415	Callithrix jacchus	78.87	0.00e+00	1206.00
IUUC-Cfa-020351	Canis familiaris	80.38	0.00e+00	1033.00
IUUC-Cpo-021746	Cavia porcellus	72.09	0.00e+00	1052.00
IUUC-Csa-023450	Chlorocebus sabaeus	81.36	0.00e+00	1163.00
IUUC-Csv-025987	Ciona savignyi	37.13	6.00e-56	211.00
IUUC-Dno-029038	Dasypus novemcinctus	66.62	0.00e+00	915.00
IUUC-Dor-030826	Dipodomys ordii	69.08	0.00e+00	924.00
IUUC-Ete-033061	Echinops telfairi	68.37	0.00e+00	979.00
IUUC-Eca-033710	Equus caballus	77.25	0.00e+00	800.00
IUUC-Eeu-035266	Erinaceus europaeus	62.32	0.00e+00	646.00
IUUC-Fca-035414	Felis catus	81.48	0.00e+00	1196.00
IUUC-Fal-037357	Ficedula albicollis	51.01	0.00e+00	673.00
IUUC-Gga-040255	Gallus gallus	51.66	0.00e+00	672.00
IUUC-Gma-044372	Glycine max	38.83	1.00e-21	99.00
IUUC-Ggo-045300	Gorilla gorilla	80.75	0.00e+00	1216.00
IUUC-Hsa-045826	Homo sapiens	81.01	0.00e+00	1193.00
IUUC-Itr-048456	Ictidomys tridecemlineatus	78.75	0.00e+00	1129.00
IUUC-Lch-050674	Latimeria chalumnae	64.04	2.00e-135	476.00
IUUC-Lpe-050895	Leersia perrieri	36.05	6.00e-20	92.80
IUUC-Laf-054591	Loxodonta africana	76.54	0.00e+00	1100.00
IUUC-Mcc-055017	Macaca mulatta	77.17	0.00e+00	1087.00
IUUC-Mtr-058400	Medicago truncatula	40.85	7.00e-26	112.00
IUUC-Mga-059484	Meleagris gallopavo	49.60	2.00e-180	625.00
IUUC-Mmr-061544	Microcebus murinus	80.03	0.00e+00	1233.00
IUUC-Mdo-062408	Monodelphis domestica	58.20	0.00e+00	792.00
IUUC-Mmu-064203	Mus musculus	68.73	0.00e+00	1011.00
IUUC-Mac-065131	Musa acuminata	28.63	2.00e-21	97.80
IUUC-Mpu-066899	Mustela putorius furo	80.36	0.00e+00	1146.00
IUUC-Mlu-067781	Myotis lucifugus	77.48	0.00e+00	1064.00
IUUC-Nle-069031	Nomascus leucogenys	81.44	0.00e+00	1233.00
IUUC-Opr-070889	Ochotona princeps	67.80	3.00e-161	561.00
IUUC-Ont-072557	Oreochromis niloticus	50.00	1.00e-106	380.00
IUUC-Ocu-074785	Oryctolagus cuniculus	75.36	0.00e+00	1071.00
IUUC-Oba-075953	Oryza barthii	38.62	8.00e-22	98.60
IUUC-Obr-076308	Oryza brachyantha	38.10	4.00e-21	96.70
IUUC-Ogl-076938	Oryza glaberrima	38.62	8.00e-22	98.60
IUUC-Ogu-078659	Oryza glumaepatula	37.50	1.00e-15	78.60
IUUC-Oin-079086	Oryza indica	37.50	1.00e-15	79.00
IUUC-Olo-080264	Oryza longistaminata	37.50	1.00e-15	79.30
IUUC-Ome-081445	Oryza meridionalis	28.87	3.00e-16	80.50
IUUC-Oni-082364	Oryza nivara	38.62	9.00e-22	98.20
IUUC-Opu-083700	Oryza punctata	37.41	2.00e-20	94.70
IUUC-Oru-085093	Oryza rufipogon	37.50	1.00e-15	79.00
IUUC-Osa-085434	Oryza sativa	38.62	8.00e-22	98.20
IUUC-Olu-087823	Ostreococcus lucimarinus	33.61	7.00e-14	68.90
IUUC-Oga-088383	Otolemur garnettii	72.51	0.00e+00	979.00
IUUC-Oar-089357	Ovis aries	81.46	0.00e+00	1246.00
IUUC-Ptr-090959	Pan troglodytes	81.14	0.00e+00	1194.00
IUUC-Pan-092160	Papio anubis	81.45	0.00e+00	1184.00
IUUC-Psi-093036	Pelodiscus sinensis	52.43	2.00e-169	588.00
IUUC-Pab-098198	Pongo abelii	81.01	0.00e+00	1158.00
IUUC-Pop-099956	Populus trichocarpa	39.19	2.00e-23	104.00
IUUC-Ppe-101676	Prunus persica	47.11	4.00e-23	103.00
IUUC-Pva-102243	Pteropus vampyrus	81.64	0.00e+00	1220.00
IUUC-Rno-104832	Rattus norvegicus	67.39	0.00e+00	942.00
IUUC-Sha-107601	Sarcophilus harrisii	56.45	0.00e+00	756.00
IUUC-Sit-110609	Setaria italica	31.97	3.00e-17	84.00
IUUC-Sly-111863	Solanum lycopersicum	30.70	3.00e-22	100.00
IUUC-Stu-112154	Solanum tuberosum	31.60	2.00e-21	98.20
IUUC-Sar-113493	Sorex araneus	68.81	4.00e-75	275.00
IUUC-Sbi-114470	Sorghum bicolor	34.69	5.00e-19	90.10
IUUC-Tgu-116812	Taeniopygia guttata	51.04	0.00e+00	723.00
IUUC-Tru-117996	Takifugu rubripes	47.75	6.00e-88	318.00
IUUC-Tsy-119446	Tarsius syrichta	66.35	0.00e+00	937.00
IUUC-Tni-120842	Tetraodon nigroviridis	37.96	9.00e-133	467.00
IUUC-Tca-121417	Theobroma cacao	39.19	2.00e-22	101.00
IUUC-Tae-124838	Triticum aestivum	29.31	2.00e-20	94.40
IUUC-Tur-126725	Triticum urartu	29.31	1.00e-20	94.70
IUUC-Tbe-127550	Tupaia belangeri	68.60	0.00e+00	967.00
IUUC-Ttr-128364	Tursiops truncatus	83.83	0.00e+00	1147.00
IUUC-Vpa-130659	Vicugna pacos	80.43	0.00e+00	985.00
IUUC-Vvi-131586	Vitis vinifera	31.43	3.00e-12	68.20
IUUC-Xtr-131846	Xenopus tropicalis	45.26	4.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence