iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000017213.2	ENSCJAT00000033574.2	ENSCJAP00000031763.2
ENSCJAG00000017213.2	ENSCJAT00000033617.2	ENSCJAP00000031804.2
ENSCJAG00000017213.2	ENSCJAT00000033625.1	ENSCJAP00000031812.1
ENSCJAG00000017213.2	ENSCJAT00000033602.2	ENSCJAP00000031790.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-14	52.1	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvW 28
           gH+d v+c+a+  d ++++sGs D++i +W
   Q: 51   GHKDTVYCVAYaKDgKRFASGSADKSIIIW 80
           8***********777*************** PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MRAVLTWRDK AEHCINDIAF KPDGTQLILA AGNRLLVYDT SDGTLLQPLK GHKDTVYCVA 60
YAKDGKRFAS GSADKSIIIW TSKLEGILKY THNDSIQCVS YNPVTHQLAS CSSSDFGLWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGTTCAC GACATTCACA GCAAGGCAAC CCTATCTCCT AGGAGGACGT TGGTCCCAGT 60
ACAGGGAGCA GGAGACTTGT TTCCAGAGGC TTCCAGGCTA ACTCAGCAAA TCACTTACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036064--C:ciliary basal body
GO:0097546--C:ciliary base
GO:0005829--C:cytosol
GO:0030991--C:intraciliary transport particle A
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0048593--P:camera-type eye morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0010172--P:embryonic body morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0035115--P:embryonic forelimb morphogenesis
GO:0060971--P:embryonic heart tube left/right pattern formation
GO:0072594--P:establishment of protein localization to organelle
GO:0035720--P:intraciliary anterograde transport
GO:0035721--P:intraciliary retrograde transport
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0021914--P:negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0061512--P:protein localization to cilium
GO:0007227--P:signal transduction downstream of smoothened
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	87.78	0.00e+00	2128.00
IUUC-Apl-003504	Anas platyrhynchos	80.90	0.00e+00	1644.00
IUUC-Aca-004767	Anolis carolinensis	79.21	0.00e+00	1962.00
IUUC-Ame-011642	Astyanax mexicanus	70.21	0.00e+00	1749.00
IUUC-Bta-012969	Bos taurus	85.28	0.00e+00	2050.00
IUUC-Cel-018670	Caenorhabditis elegans	36.70	0.00e+00	824.00
IUUC-Cfa-020915	Canis familiaris	88.18	0.00e+00	2102.00
IUUC-Cpo-021888	Cavia porcellus	83.30	0.00e+00	1687.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	40.40	0.00e+00	851.00
IUUC-Csa-023533	Chlorocebus sabaeus	91.39	0.00e+00	2217.00
IUUC-Cin-025121	Ciona intestinalis	53.92	0.00e+00	1379.00
IUUC-Csv-026240	Ciona savignyi	55.00	0.00e+00	1337.00
IUUC-Dno-029685	Dasypus novemcinctus	83.27	0.00e+00	2013.00
IUUC-Dme-032005	Drosophila melanogaster	26.58	6.00e-09	57.00
IUUC-Ete-032682	Echinops telfairi	77.36	0.00e+00	1503.00
IUUC-Eca-033831	Equus caballus	88.01	0.00e+00	2169.00
IUUC-Eeu-034919	Erinaceus europaeus	81.69	0.00e+00	956.00
IUUC-Fca-036559	Felis catus	87.77	0.00e+00	2146.00
IUUC-Fal-037340	Ficedula albicollis	78.67	0.00e+00	1575.00
IUUC-Gga-040595	Gallus gallus	68.64	0.00e+00	1649.00
IUUC-Ggo-045356	Gorilla gorilla	87.77	0.00e+00	2191.00
IUUC-Hsa-046135	Homo sapiens	87.56	0.00e+00	2189.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	75.63	0.00e+00	1784.00
IUUC-Lch-050183	Latimeria chalumnae	74.85	0.00e+00	1002.00
IUUC-Loc-052049	Lepisosteus oculatus	73.82	0.00e+00	1824.00
IUUC-Laf-053728	Loxodonta africana	86.66	0.00e+00	2131.00
IUUC-Mcc-054971	Macaca mulatta	88.40	0.00e+00	2198.00
IUUC-Meu-056446	Macropus eugenii	77.98	0.00e+00	1958.00
IUUC-Mga-059296	Meleagris gallopavo	74.58	0.00e+00	1906.00
IUUC-Mmr-061232	Microcebus murinus	83.46	0.00e+00	2034.00
IUUC-Mdo-062115	Monodelphis domestica	85.66	0.00e+00	2116.00
IUUC-Mmu-063664	Mus musculus	86.32	0.00e+00	2148.00
IUUC-Mpu-066136	Mustela putorius furo	86.97	0.00e+00	2138.00
IUUC-Mlu-068238	Myotis lucifugus	83.82	0.00e+00	2072.00
IUUC-Nle-069003	Nomascus leucogenys	87.87	0.00e+00	2108.00
IUUC-Ont-072080	Oreochromis niloticus	71.35	0.00e+00	1801.00
IUUC-Oan-072891	Ornithorhynchus anatinus	73.06	0.00e+00	778.00
IUUC-Ocu-074262	Oryctolagus cuniculus	85.36	0.00e+00	2069.00
IUUC-Ola-086538	Oryzias latipes	68.82	0.00e+00	1709.00
IUUC-Oga-088722	Otolemur garnettii	82.97	0.00e+00	2020.00
IUUC-Oar-089249	Ovis aries	80.37	0.00e+00	1930.00
IUUC-Ptr-090752	Pan troglodytes	90.45	0.00e+00	2020.00
IUUC-Pan-092472	Papio anubis	91.63	0.00e+00	2239.00
IUUC-Psi-093335	Pelodiscus sinensis	81.41	0.00e+00	1658.00
IUUC-Pma-094520	Petromyzon marinus	65.20	0.00e+00	1346.00
IUUC-Ppa-095600	Physcomitrella patens	65.79	1.00e-39	155.00
IUUC-Pfo-096526	Poecilia formosa	67.47	0.00e+00	1663.00
IUUC-Pab-098428	Pongo abelii	93.74	0.00e+00	1170.00
IUUC-Pca-100233	Procavia capensis	63.15	0.00e+00	822.00
IUUC-Pva-103064	Pteropus vampyrus	77.20	0.00e+00	984.00
IUUC-Rno-105764	Rattus norvegicus	86.56	0.00e+00	2117.00
IUUC-Sha-106649	Sarcophilus harrisii	85.13	0.00e+00	2092.00
IUUC-Smo-109287	Selaginella moellendorffii	37.78	0.00e+00	786.00
IUUC-Tgu-116870	Taeniopygia guttata	77.45	0.00e+00	1858.00
IUUC-Tru-118661	Takifugu rubripes	66.20	0.00e+00	1661.00
IUUC-Tsy-119640	Tarsius syrichta	91.04	4.00e-108	386.00
IUUC-Tni-120812	Tetraodon nigroviridis	67.87	0.00e+00	1664.00
IUUC-Ttr-128862	Tursiops truncatus	83.32	0.00e+00	2084.00
IUUC-Vpa-130049	Vicugna pacos	83.18	3.00e-151	529.00
IUUC-Xtr-131914	Xenopus tropicalis	71.75	0.00e+00	1751.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence