iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109287

Ensembl Protein ID

EFJ22599

UniProt Accession

D8RZE8; D8RZE8_SELML

Genbank Protein ID

EFJ22599.1

Protein Name

FAP80/IFT122A

Genbank Nucleotide ID

GL377595

Gene Name

FAP80; SELMODRAFT_450598

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_450598	EFJ22599	EFJ22599

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-09	38.1	29	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH++ v+cla+  d ++++sG+ D+ti vW 
   Q: 29   GHKGAVYCLAYsRDgKRFASGGADKTIIVWT 59
           8***********888***************5 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

DGSQLIAAVG SRVLMYDAAT GDLLHSLKGH KGAVYCLAYS RDGKRFASGG ADKTIIVWTY 60
KARGAAAQLL LLTCILKYSH AHSIQCLAYN PVTQQLASGT ASDFGIWSPE QKSVLKHTTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGAAGCC AGCTTATTGC TGCAGTGGGT AGCCGAGTCC TCATGTATGA TGCAGCAACC 60
GGCGACCTTT TGCATTCGCT CAAAGGTGGA AGGATGGACA AATCTCTCTT TATAATGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_450598

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-019249	Callithrix jacchus	37.70	0.00e+00	812.00
IUUC-Csa-023533	Chlorocebus sabaeus	39.50	0.00e+00	891.00
IUUC-Eeu-034919	Erinaceus europaeus	33.15	6.00e-77	282.00
IUUC-Fca-036559	Felis catus	39.53	0.00e+00	905.00
IUUC-Ggo-045356	Gorilla gorilla	38.55	0.00e+00	878.00
IUUC-Hsa-046135	Homo sapiens	38.02	0.00e+00	876.00
IUUC-Laf-053728	Loxodonta africana	39.23	0.00e+00	913.00
IUUC-Mcc-054971	Macaca mulatta	38.67	0.00e+00	874.00
IUUC-Mmr-061232	Microcebus murinus	37.51	0.00e+00	846.00
IUUC-Mmu-063664	Mus musculus	40.02	0.00e+00	905.00
IUUC-Mlu-068238	Myotis lucifugus	38.91	0.00e+00	853.00
IUUC-Nle-069003	Nomascus leucogenys	38.25	0.00e+00	847.00
IUUC-Ocu-074262	Oryctolagus cuniculus	39.00	0.00e+00	871.00
IUUC-Ptr-090752	Pan troglodytes	37.78	0.00e+00	853.00
IUUC-Pan-092472	Papio anubis	39.76	0.00e+00	892.00
IUUC-Pab-098428	Pongo abelii	32.08	1.00e-97	350.00
IUUC-Rno-105764	Rattus norvegicus	37.49	0.00e+00	835.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence