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Tag Content
iUUCD ID IUUC-Sre-115040
Ensembl Protein ID CBQ70807
UniProt Accession E6ZUA0; E6ZUA0_SPORE
Genbank Protein ID CBQ70807.1
Protein Name Coatomer subunit beta'
Genbank Nucleotide ID FQ311441
Gene Name sr12468
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
sr12468 CBQ70807 CBQ70807
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.10e-33 109.6 98 129
UBD/Beta-Prp 1.20e-70 236.5 14 301
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d ++cla  ++  ++++GsdD tik+WD++
   Q: 98   HPDYIRCLAVhPTgSYVITGSDDMTIKMWDWD 129
           99*******997779***************85 PP
   

   UBD/Beta-Prp
   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdkl 109
           +++++++++f+p +++l++g ++g++ +w+++tg  +++++  + +v++vkf+ +++++v gs+D  ++ ++++t + v+++++h d++++l+++p+g+++
   Q: 14   KSERVKSLDFHPTEPWLLAGLYSGSVNIWNYETGVIVKTFEVTNVPVRCVKFIARKNWFVAGSDDFQLRAFNYNTHEKVISFEAHPDYIRCLAVHPTGSYV 114
           5678999********************************************************************************************** PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklw 207
           ++Gs+d ti++wd+++++   +t++gh++ ++ ++++p++ n ++s+slDrtv++W l +     tl   h++ v+ +++ + g  ++++++++d+tvk+w
   Q: 115  ITGSDDMTIKMWDWDKNWRHVQTFEGHTHYIMNLCFNPKDsNTFASSSLDRTVKVWTLGSSLANFTLDA-HDKGVNYVEYFHGGdkPYMLTVGDDRTVKIW 214
           ********************************************************9988888888876.*********6655556*************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
           d+ +++cv+tl+ght+nv+   f+p   +++sgs+Dg++++W + +  l +tl +  ++v++va+ + ++n ++ g +++ v i kl k
   Q: 215  DYLSKSCVQTLTGHTSNVSFAVFHPSLPLIISGSEDGTVKLWHSNTYRLESTLDYGLERVWCVAY-KKTGNDVAIGYDEGAVVI-KLGK 301
           *****************************************************************.888888888876666555.6555 PP
   
Organism Sporisorium reilianum
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
Protein Sequence
(Fasta)
MPMLLDIQRK LFAKSERVKS LDFHPTEPWL LAGLYSGSVN IWNYETGVIV KTFEVTNVPV 60
RCVKFIARKN WFVAGSDDFQ LRAFNYNTHE KVISFEAHPD YIRCLAVHPT GSYVITGSDD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sre-115040|E3,WD_repeat;UBD,Beta-Prp|Sporisorium reilianum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCCGATGC TCCTCGATAT CCAGCGCAAG CTGTTTGCAA AGTCGGAGCG CGTCAAGTCG 60
CTCGACTTCC ACCCAACAGA GCCATGGCTC CTCGCCGGTC TCTACTCGGG CTCCGTCAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sre-115040|E3,WD_repeat;UBD,Beta-Prp|Sporisorium reilianum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005829--C:cytosol
GO:0000139--C:Golgi membrane
GO:0005634--C:nucleus
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0032511--P:late endosome to vacuole transport via multivesicular body sorting pathway
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000654 Aegilops tauschii 44.76 0.00e+00 763.00
IUUC-Aml-002154 Ailuropoda melanoleuca 52.44 0.00e+00 941.00
IUUC-Atr-003090 Amborella trichopoda 51.14 0.00e+00 899.00
IUUC-Apl-003976 Anas platyrhynchos 52.68 0.00e+00 944.00
IUUC-Aca-004301 Anolis carolinensis 52.21 0.00e+00 952.00
IUUC-Aly-006508 Arabidopsis lyrata 52.32 0.00e+00 917.00
IUUC-Ath-007635 Arabidopsis thaliana 52.26 0.00e+00 915.00
IUUC-Ago-007914 Ashbya gossypii 48.39 0.00e+00 791.00
IUUC-Acl-008237 Aspergillus clavatus 56.77 0.00e+00 1015.00
IUUC-Afl-008535 Aspergillus flavus 56.38 0.00e+00 972.00
IUUC-Afu-008845 Aspergillus fumigatus 57.04 0.00e+00 997.00
IUUC-Ani-009135 Aspergillus nidulans 56.95 0.00e+00 984.00
IUUC-Ang-009654 Aspergillus niger 61.34 0.00e+00 896.00
IUUC-Aor-009939 Aspergillus oryzae 57.31 0.00e+00 1032.00
IUUC-Ate-010355 Aspergillus terreus 56.68 0.00e+00 982.00
IUUC-Ame-010922 Astyanax mexicanus 46.95 0.00e+00 801.00
IUUC-Bgr-012249 Blumeria graminis 56.56 0.00e+00 974.00
IUUC-Bta-013579 Bos taurus 53.14 0.00e+00 850.00
IUUC-Bci-013866 Botrytis cinerea 58.05 0.00e+00 965.00
IUUC-Bdi-015046 Brachypodium distachyon 51.26 0.00e+00 903.00
IUUC-Bol-016271 Brassica oleracea 52.99 0.00e+00 929.00
IUUC-Bra-017758 Brassica rapa 52.43 0.00e+00 921.00
IUUC-Cel-018387 Caenorhabditis elegans 50.96 0.00e+00 913.00
IUUC-Cja-019145 Callithrix jacchus 52.62 0.00e+00 945.00
IUUC-Cfa-020564 Canis familiaris 52.50 0.00e+00 944.00
IUUC-Cpo-022201 Cavia porcellus 52.44 0.00e+00 942.00
IUUC-Cre-022938 Chlamydomonas reinhardtii 51.91 0.00e+00 862.00
IUUC-Csa-023383 Chlorocebus sabaeus 57.75 0.00e+00 739.00
IUUC-Cho-024454 Choloepus hoffmanni 50.41 0.00e+00 811.00
IUUC-Cin-025681 Ciona intestinalis 49.64 0.00e+00 865.00
IUUC-Csv-026012 Ciona savignyi 50.96 0.00e+00 858.00
IUUC-Cgl-026649 Colletotrichum gloeosporioides 52.51 0.00e+00 870.00
IUUC-Cne-026986 Cryptococcus neoformans 63.34 0.00e+00 1116.00
IUUC-Cme-027219 Cyanidioschyzon merolae 45.08 0.00e+00 778.00
IUUC-Dre-027846 Danio rerio 51.92 0.00e+00 941.00
IUUC-Dor-030462 Dipodomys ordii 52.72 0.00e+00 757.00
IUUC-Dse-031268 Dothistroma septosporum 56.19 0.00e+00 981.00
IUUC-Dme-031791 Drosophila melanogaster 50.87 0.00e+00 881.00
IUUC-Ete-033166 Echinops telfairi 51.70 8.00e-180 622.00
IUUC-Eca-034180 Equus caballus 51.04 0.00e+00 902.00
IUUC-Eeu-035086 Erinaceus europaeus 39.04 1.00e-91 329.00
IUUC-Fca-036265 Felis catus 52.50 0.00e+00 943.00
IUUC-Fal-037202 Ficedula albicollis 51.89 0.00e+00 899.00
IUUC-Fox-037711 Fusarium oxysporum 56.32 0.00e+00 897.00
IUUC-Fso-038268 Fusarium solani 55.89 0.00e+00 898.00
IUUC-Gmo-039046 Gadus morhua 52.38 0.00e+00 941.00
IUUC-Ggr-039863 Gaeumannomyces graminis 56.59 0.00e+00 933.00
IUUC-Gga-041112 Gallus gallus 52.67 0.00e+00 946.00
IUUC-Gac-041733 Gasterosteus aculeatus 51.52 0.00e+00 913.00
IUUC-Gma-042910 Glycine max 52.70 0.00e+00 930.00
IUUC-Ggo-044984 Gorilla gorilla 52.62 0.00e+00 945.00
IUUC-Hsa-046698 Homo sapiens 52.62 0.00e+00 946.00
IUUC-Hvu-047669 Hordeum vulgare 60.96 1.00e-139 487.00
IUUC-Itr-048212 Ictidomys tridecemlineatus 52.44 0.00e+00 940.00
IUUC-Kpa-049265 Komagataella pastoris 51.32 0.00e+00 910.00
IUUC-Lch-050473 Latimeria chalumnae 52.50 0.00e+00 945.00
IUUC-Lpe-051579 Leersia perrieri 52.09 0.00e+00 909.00
IUUC-Loc-052675 Lepisosteus oculatus 52.13 0.00e+00 941.00
IUUC-Lma-053218 Leptosphaeria maculans 55.73 0.00e+00 952.00
IUUC-Laf-053757 Loxodonta africana 52.43 0.00e+00 937.00
IUUC-Mcc-054859 Macaca mulatta 52.62 0.00e+00 945.00
IUUC-Meu-056174 Macropus eugenii 40.38 7.00e-80 290.00
IUUC-Mor-057264 Magnaporthe oryzae 55.90 0.00e+00 921.00
IUUC-Mpo-057538 Magnaporthe poae 56.34 0.00e+00 948.00
IUUC-Mtr-058310 Medicago truncatula 53.46 0.00e+00 934.00
IUUC-Mla-058937 Melampsora laricipopulina 63.78 0.00e+00 1105.00
IUUC-Mga-059875 Meleagris gallopavo 52.28 0.00e+00 942.00
IUUC-Mvi-060240 Microbotryum violaceum 65.32 0.00e+00 1150.00
IUUC-Mmr-061261 Microcebus murinus 52.50 0.00e+00 944.00
IUUC-Mdo-062076 Monodelphis domestica 52.09 0.00e+00 947.00
IUUC-Mmu-063324 Mus musculus 52.62 0.00e+00 946.00
IUUC-Mac-064636 Musa acuminata 50.78 0.00e+00 899.00
IUUC-Mpu-065961 Mustela putorius furo 52.50 0.00e+00 942.00
IUUC-Mlu-067059 Myotis lucifugus 51.89 0.00e+00 919.00
IUUC-Nfi-068277 Neosartorya fischeri 57.13 0.00e+00 992.00
IUUC-Ncr-068659 Neurospora crassa 56.74 0.00e+00 993.00
IUUC-Nle-069034 Nomascus leucogenys 52.62 0.00e+00 945.00
IUUC-Opr-070334 Ochotona princeps 54.21 0.00e+00 883.00
IUUC-Ont-071563 Oreochromis niloticus 52.25 0.00e+00 939.00
IUUC-Oan-073416 Ornithorhynchus anatinus 52.51 0.00e+00 895.00
IUUC-Ocu-074522 Oryctolagus cuniculus 52.25 0.00e+00 938.00
IUUC-Oba-075760 Oryza barthii 50.36 0.00e+00 877.00
IUUC-Obr-076163 Oryza brachyantha 52.31 0.00e+00 907.00
IUUC-Ogl-077450 Oryza glaberrima 51.20 0.00e+00 902.00
IUUC-Ogu-078994 Oryza glumaepatula 50.36 0.00e+00 876.00
IUUC-Oin-079856 Oryza indica 51.60 0.00e+00 889.00
IUUC-Olo-080731 Oryza longistaminata 51.07 0.00e+00 860.00
IUUC-Ome-081554 Oryza meridionalis 48.54 0.00e+00 822.00
IUUC-Oni-082324 Oryza nivara 50.36 0.00e+00 875.00
IUUC-Opu-083400 Oryza punctata 50.12 0.00e+00 875.00
IUUC-Oru-084829 Oryza rufipogon 50.36 0.00e+00 875.00
IUUC-Osa-086026 Oryza sativa 51.32 0.00e+00 905.00
IUUC-Ola-087245 Oryzias latipes 51.95 0.00e+00 936.00
IUUC-Olu-087655 Ostreococcus lucimarinus 51.66 0.00e+00 900.00
IUUC-Oga-088163 Otolemur garnettii 50.85 0.00e+00 893.00
IUUC-Oar-089842 Ovis aries 52.50 0.00e+00 945.00
IUUC-Ptr-090501 Pan troglodytes 52.62 0.00e+00 944.00
IUUC-Pan-092011 Papio anubis 52.62 0.00e+00 945.00
IUUC-Psi-093308 Pelodiscus sinensis 52.50 0.00e+00 942.00
IUUC-Pma-094695 Petromyzon marinus 51.22 0.00e+00 857.00
IUUC-Pno-094785 Phaeosphaeria nodorum 61.35 1.00e-107 382.00
IUUC-Ppa-095911 Physcomitrella patens 51.72 0.00e+00 910.00
IUUC-Pfo-096587 Poecilia formosa 51.56 0.00e+00 939.00
IUUC-Pab-097926 Pongo abelii 51.21 0.00e+00 879.00
IUUC-Pop-099634 Populus trichocarpa 52.20 0.00e+00 925.00
IUUC-Pca-100965 Procavia capensis 51.59 0.00e+00 906.00
IUUC-Ppe-101470 Prunus persica 53.29 0.00e+00 933.00
IUUC-Pva-102451 Pteropus vampyrus 51.96 0.00e+00 749.00
IUUC-Pgr-103453 Puccinia graminis 64.91 0.00e+00 1146.00
IUUC-Ptt-103868 Puccinia triticina 65.28 0.00e+00 1144.00
IUUC-Pte-104274 Pyrenophora teres 55.91 0.00e+00 971.00
IUUC-Pyt-104794 Pyrenophora triticirepentis 55.20 0.00e+00 917.00
IUUC-Rno-105979 Rattus norvegicus 46.00 0.00e+00 708.00
IUUC-Sce-106269 Saccharomyces cerevisiae 49.00 0.00e+00 793.00
IUUC-Sha-106905 Sarcophilus harrisii 52.09 0.00e+00 946.00
IUUC-Sja-107838 Schizosaccharomyces japonicus 49.62 0.00e+00 846.00
IUUC-Spo-108299 Schizosaccharomyces pombe 49.69 0.00e+00 874.00
IUUC-Smo-108828 Selaginella moellendorffii 51.35 0.00e+00 895.00
IUUC-Sit-110239 Setaria italica 51.33 0.00e+00 903.00
IUUC-Sly-111775 Solanum lycopersicum 52.16 0.00e+00 909.00
IUUC-Stu-112906 Solanum tuberosum 51.97 0.00e+00 825.00
IUUC-Sar-113472 Sorex araneus 50.98 0.00e+00 675.00
IUUC-Sbi-114052 Sorghum bicolor 51.83 0.00e+00 916.00
IUUC-Ssc-115593 Sus scrofa 52.38 0.00e+00 942.00
IUUC-Tgu-117239 Taeniopygia guttata 52.56 0.00e+00 944.00
IUUC-Tru-118025 Takifugu rubripes 52.13 0.00e+00 934.00
IUUC-Tsy-118824 Tarsius syrichta 51.03 0.00e+00 696.00
IUUC-Tni-120142 Tetraodon nigroviridis 52.07 0.00e+00 929.00
IUUC-Tca-121613 Theobroma cacao 52.68 0.00e+00 932.00
IUUC-Tre-122072 Trichoderma reesei 58.50 0.00e+00 981.00
IUUC-Tvi-122546 Trichoderma virens 57.44 0.00e+00 971.00
IUUC-Tae-125488 Triticum aestivum 51.46 0.00e+00 906.00
IUUC-Tur-126283 Triticum urartu 44.76 0.00e+00 762.00
IUUC-Tme-127041 Tuber melanosporum 58.10 0.00e+00 1009.00
IUUC-Tbe-127770 Tupaia belangeri 54.01 0.00e+00 786.00
IUUC-Ttr-129294 Tursiops truncatus 52.38 0.00e+00 941.00
IUUC-Uma-129351 Ustilago maydis 91.20 0.00e+00 1580.00
IUUC-Vda-129716 Verticillium dahliae 55.40 0.00e+00 977.00
IUUC-Vpa-130037 Vicugna pacos 40.09 3.00e-99 354.00
IUUC-Vvi-131689 Vitis vinifera 53.11 0.00e+00 927.00
IUUC-Xtr-132633 Xenopus tropicalis 52.39 0.00e+00 941.00
IUUC-Xma-133347 Xiphophorus maculatus 51.68 0.00e+00 940.00
IUUC-Yli-134455 Yarrowia lipolytica 52.14 0.00e+00 858.00
IUUC-Zma-135706 Zea mays 51.44 0.00e+00 919.00
Created Date 25-Jun-2017

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