iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017378

Ensembl Protein ID

Bra035062.1-P

UniProt Accession

M4F1W5; M4F1W5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra035062	Bra035062.1	Bra035062.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	30.67	9.00e-71	262.00	IUUC-Sce-106205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MREEEIEKIR GVVRDCVSKH LYSSAIFFAD KVAALTNDPA DIYMQAQALF LGRHFRRAFH 60
LLNASKIVLR DLRFRYLAAK CLEELKEWDQ CLLMLGDAKV DEDGNVYDAK DGNLIYFDKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGAAG AAGAAATCGA GAAGATCCGA GGCGTGGTTC GCGACTGCGT CAGCAAACAC 60
TTGTACTCCT CCGCCATCTT CTTCGCCGAT AAAGTCGCCG CTCTCACCAA CGACCCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR011716--TPR-3
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF07720--TPR_3
PF13181--TPR_8

SMART

SM00028--TPR

Gene Ontology

GO:0010087--P:phloem or xylem histogenesis
GO:0032875--P:regulation of DNA endoreduplication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000117	Aegilops tauschii	65.21	2.00e-178	618.00
IUUC-Aml-001382	Ailuropoda melanoleuca	42.39	3.00e-103	369.00
IUUC-Atr-002720	Amborella trichopoda	77.47	0.00e+00	889.00
IUUC-Apl-003937	Anas platyrhynchos	42.32	2.00e-97	349.00
IUUC-Aca-004235	Anolis carolinensis	39.74	4.00e-102	365.00
IUUC-Aly-005937	Arabidopsis lyrata	95.22	0.00e+00	1025.00
IUUC-Ath-006890	Arabidopsis thaliana	95.22	0.00e+00	1019.00
IUUC-Ago-007821	Ashbya gossypii	32.89	2.00e-76	280.00
IUUC-Acl-008251	Aspergillus clavatus	31.09	1.00e-61	231.00
IUUC-Afl-008584	Aspergillus flavus	28.52	1.00e-47	184.00
IUUC-Afu-009095	Aspergillus fumigatus	30.98	6.00e-60	224.00
IUUC-Ani-009178	Aspergillus nidulans	30.13	4.00e-55	209.00
IUUC-Ang-009647	Aspergillus niger	31.11	2.00e-63	236.00
IUUC-Aor-010061	Aspergillus oryzae	28.73	4.00e-53	202.00
IUUC-Ate-010558	Aspergillus terreus	28.80	8.00e-54	204.00
IUUC-Ame-011880	Astyanax mexicanus	39.55	3.00e-103	369.00
IUUC-Bgr-012022	Blumeria graminis	33.27	1.00e-81	296.00
IUUC-Bta-012343	Bos taurus	42.40	4.00e-111	395.00
IUUC-Bci-013719	Botrytis cinerea	32.25	3.00e-80	292.00
IUUC-Bdi-014012	Brachypodium distachyon	73.64	0.00e+00	811.00
IUUC-Bol-015750	Brassica oleracea	99.45	0.00e+00	1050.00
IUUC-Cel-018178	Caenorhabditis elegans	27.22	2.00e-34	140.00
IUUC-Cja-019645	Callithrix jacchus	42.24	1.00e-109	390.00
IUUC-Cfa-021173	Canis familiaris	41.46	2.00e-105	376.00
IUUC-Cpo-022175	Cavia porcellus	42.03	6.00e-105	374.00
IUUC-Csa-023470	Chlorocebus sabaeus	42.03	4.00e-106	378.00
IUUC-Cho-024406	Choloepus hoffmanni	38.34	1.00e-56	213.00
IUUC-Cin-025267	Ciona intestinalis	38.97	5.00e-76	277.00
IUUC-Cgl-026539	Colletotrichum gloeosporioides	34.49	3.00e-82	299.00
IUUC-Cne-026856	Cryptococcus neoformans	31.44	8.00e-71	261.00
IUUC-Cme-027272	Cyanidioschyzon merolae	28.35	5.00e-34	139.00
IUUC-Dre-027977	Danio rerio	39.96	4.00e-104	372.00
IUUC-Dno-029872	Dasypus novemcinctus	44.72	6.00e-78	284.00
IUUC-Dor-030233	Dipodomys ordii	42.94	5.00e-69	254.00
IUUC-Dse-031306	Dothistroma septosporum	30.37	2.00e-73	269.00
IUUC-Dme-031877	Drosophila melanogaster	41.55	1.00e-61	231.00
IUUC-Ete-032688	Echinops telfairi	35.91	2.00e-33	136.00
IUUC-Eca-033845	Equus caballus	42.39	5.00e-103	368.00
IUUC-Eeu-034744	Erinaceus europaeus	36.49	5.00e-26	112.00
IUUC-Fca-036291	Felis catus	41.87	7.00e-106	377.00
IUUC-Fal-036779	Ficedula albicollis	41.79	1.00e-108	387.00
IUUC-Fox-037869	Fusarium oxysporum	33.58	5.00e-80	291.00
IUUC-Fso-038267	Fusarium solani	33.95	3.00e-83	302.00
IUUC-Gmo-039534	Gadus morhua	39.44	1.00e-104	374.00
IUUC-Ggr-039826	Gaeumannomyces graminis	35.21	5.00e-66	245.00
IUUC-Gga-040228	Gallus gallus	42.13	2.00e-108	386.00
IUUC-Gac-041593	Gasterosteus aculeatus	39.67	5.00e-106	378.00
IUUC-Gma-043291	Glycine max	80.07	0.00e+00	910.00
IUUC-Ggo-044491	Gorilla gorilla	42.03	5.00e-106	378.00
IUUC-Hsa-046186	Homo sapiens	42.11	2.00e-107	382.00
IUUC-Hvu-047156	Hordeum vulgare	73.06	3.00e-120	424.00
IUUC-Itr-048812	Ictidomys tridecemlineatus	42.31	4.00e-105	375.00
IUUC-Kpa-049186	Komagataella pastoris	33.52	1.00e-77	283.00
IUUC-Lch-050215	Latimeria chalumnae	43.32	1.00e-92	333.00
IUUC-Lpe-051395	Leersia perrieri	68.50	0.00e+00	710.00
IUUC-Loc-052340	Lepisosteus oculatus	38.84	4.00e-98	352.00
IUUC-Lma-053003	Leptosphaeria maculans	32.25	2.00e-77	283.00
IUUC-Laf-054125	Loxodonta africana	41.56	1.00e-98	353.00
IUUC-Mcc-054598	Macaca mulatta	42.03	2.00e-106	379.00
IUUC-Meu-056839	Macropus eugenii	35.05	3.00e-62	232.00
IUUC-Mor-056916	Magnaporthe oryzae	33.73	9.00e-69	254.00
IUUC-Mtr-057912	Medicago truncatula	77.43	0.00e+00	863.00
IUUC-Mla-058971	Melampsora laricipopulina	29.23	3.00e-67	249.00
IUUC-Mga-059655	Meleagris gallopavo	42.31	5.00e-106	378.00
IUUC-Mvi-060246	Microbotryum violaceum	29.41	4.00e-70	259.00
IUUC-Mmr-060691	Microcebus murinus	42.51	3.00e-106	379.00
IUUC-Mdo-061872	Monodelphis domestica	42.59	6.00e-108	384.00
IUUC-Mmu-063256	Mus musculus	42.06	1.00e-109	390.00
IUUC-Mac-064797	Musa acuminata	74.03	0.00e+00	812.00
IUUC-Mpu-066773	Mustela putorius furo	42.20	1.00e-102	367.00
IUUC-Mlu-067237	Myotis lucifugus	42.06	1.00e-108	387.00
IUUC-Nfi-068499	Neosartorya fischeri	29.98	2.00e-58	220.00
IUUC-Ncr-068893	Neurospora crassa	31.29	3.00e-78	285.00
IUUC-Nle-070117	Nomascus leucogenys	41.65	3.00e-104	372.00
IUUC-Opr-070994	Ochotona princeps	47.68	4.00e-62	232.00
IUUC-Ont-072034	Oreochromis niloticus	39.89	2.00e-105	376.00
IUUC-Oan-072989	Ornithorhynchus anatinus	47.57	5.00e-54	204.00
IUUC-Ocu-074107	Oryctolagus cuniculus	39.69	1.00e-93	337.00
IUUC-Oba-074985	Oryza barthii	72.90	0.00e+00	778.00
IUUC-Obr-076412	Oryza brachyantha	73.39	0.00e+00	764.00
IUUC-Ogl-077693	Oryza glaberrima	73.09	0.00e+00	778.00
IUUC-Ogu-078411	Oryza glumaepatula	72.81	0.00e+00	780.00
IUUC-Oin-079841	Oryza indica	73.00	0.00e+00	739.00
IUUC-Olo-080560	Oryza longistaminata	70.77	0.00e+00	738.00
IUUC-Ome-081660	Oryza meridionalis	73.00	0.00e+00	782.00
IUUC-Oni-082141	Oryza nivara	72.90	0.00e+00	776.00
IUUC-Opu-083634	Oryza punctata	72.90	0.00e+00	779.00
IUUC-Oru-084291	Oryza rufipogon	72.90	0.00e+00	776.00
IUUC-Osa-085547	Oryza sativa	73.00	0.00e+00	781.00
IUUC-Ola-086854	Oryzias latipes	40.19	4.00e-105	375.00
IUUC-Olu-087784	Ostreococcus lucimarinus	41.55	8.00e-91	327.00
IUUC-Oga-088800	Otolemur garnettii	42.58	2.00e-97	349.00
IUUC-Oar-089669	Ovis aries	42.72	7.00e-104	370.00
IUUC-Ptr-091251	Pan troglodytes	42.03	4.00e-106	378.00
IUUC-Pan-092320	Papio anubis	40.90	1.00e-99	356.00
IUUC-Psi-093847	Pelodiscus sinensis	41.79	8.00e-109	387.00
IUUC-Pno-094804	Phaeosphaeria nodorum	33.51	4.00e-81	295.00
IUUC-Ppa-095889	Physcomitrella patens	59.07	2.00e-180	625.00
IUUC-Pfo-096273	Poecilia formosa	40.53	3.00e-107	382.00
IUUC-Pab-098108	Pongo abelii	48.29	6.00e-72	265.00
IUUC-Pop-099818	Populus trichocarpa	82.17	0.00e+00	939.00
IUUC-Pca-100859	Procavia capensis	41.58	5.00e-42	165.00
IUUC-Pva-102413	Pteropus vampyrus	42.06	4.00e-106	378.00
IUUC-Pgr-103689	Puccinia graminis	31.82	1.00e-50	194.00
IUUC-Ptt-103799	Puccinia triticina	30.53	1.00e-44	174.00
IUUC-Pte-104162	Pyrenophora teres	31.97	5.00e-74	271.00
IUUC-Pyt-104476	Pyrenophora triticirepentis	32.38	4.00e-76	278.00
IUUC-Rno-105403	Rattus norvegicus	42.24	3.00e-109	389.00
IUUC-Sce-106205	Saccharomyces cerevisiae	31.64	1.00e-79	291.00
IUUC-Sha-107183	Sarcophilus harrisii	42.24	2.00e-111	395.00
IUUC-Sja-107827	Schizosaccharomyces japonicus	35.67	1.00e-92	334.00
IUUC-Spo-108188	Schizosaccharomyces pombe	35.51	7.00e-88	318.00
IUUC-Ssl-108522	Sclerotinia sclerotiorum	39.83	5.00e-49	187.00
IUUC-Smo-109302	Selaginella moellendorffii	54.72	1.00e-160	559.00
IUUC-Sit-110486	Setaria italica	72.83	0.00e+00	773.00
IUUC-Sly-111083	Solanum lycopersicum	81.40	0.00e+00	942.00
IUUC-Sar-113712	Sorex araneus	43.92	6.00e-72	265.00
IUUC-Sbi-114145	Sorghum bicolor	73.41	0.00e+00	759.00
IUUC-Sre-115016	Sporisorium reilianum	31.49	3.00e-58	220.00
IUUC-Ssc-115757	Sus scrofa	42.55	1.00e-103	370.00
IUUC-Tgu-116718	Taeniopygia guttata	41.79	1.00e-108	386.00
IUUC-Tru-118018	Takifugu rubripes	40.11	1.00e-104	373.00
IUUC-Tsy-118804	Tarsius syrichta	42.58	6.00e-97	347.00
IUUC-Tni-119767	Tetraodon nigroviridis	39.48	5.00e-104	371.00
IUUC-Tca-121364	Theobroma cacao	83.85	0.00e+00	942.00
IUUC-Tre-122067	Trichoderma reesei	33.64	2.00e-83	302.00
IUUC-Tvi-122461	Trichoderma virens	33.58	7.00e-82	298.00
IUUC-Tae-123368	Triticum aestivum	72.83	0.00e+00	803.00
IUUC-Tur-126602	Triticum urartu	73.44	1.00e-173	602.00
IUUC-Tme-126892	Tuber melanosporum	33.09	5.00e-80	291.00
IUUC-Tbe-127430	Tupaia belangeri	38.89	4.00e-25	109.00
IUUC-Ttr-128535	Tursiops truncatus	42.03	1.00e-105	376.00
IUUC-Uma-129584	Ustilago maydis	31.70	2.00e-60	227.00
IUUC-Vda-129823	Verticillium dahliae	34.89	2.00e-87	316.00
IUUC-Vpa-130167	Vicugna pacos	40.92	5.00e-79	288.00
IUUC-Vvi-131646	Vitis vinifera	82.69	0.00e+00	920.00
IUUC-Xtr-131785	Xenopus tropicalis	47.91	1.00e-71	262.00
IUUC-Xma-133644	Xiphophorus maculatus	40.53	2.00e-107	382.00
IUUC-Yli-134405	Yarrowia lipolytica	31.61	6.00e-83	301.00
IUUC-Zma-135969	Zea mays	72.10	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence