iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000042015.16	ENSMUST00000160115.7	ENSMUSP00000138543.1
ENSMUSG00000042015.16	ENSMUST00000160801.7	ENSMUSP00000124033.1
ENSMUSG00000042015.16	ENSMUST00000159647.7	ENSMUSP00000138501.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RepTar	RAID2
Post-translational Modifications (PTMs)
PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-11	44.1	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc.laf........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t+ +af        s+ ll+++s D t+ vWD +tg++++
   Q: 82   GHTQKITAvIAFppldsceaSSQLLLTASADRTVGVWDCDTGRQIQ 127
           8*******558****999986699******************9986 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKAA LQTIGEDQGQ NPYTELLVLE AHRDIVRFLV RLDDFRFASA 60
GDDGIIVVWN AQTGEKLLEL RGHTQKITAV IAFPPLDSCE ASSQLLLTAS ADRTVGVWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCCAACCG CGCGGCGCCC ACGCGCGTGC TCACTGGGGA CGCGGAACCT CCGCCTCCGC 60
CGTCGCGGCC TTCAGTGCGG GCGCCCCAAC GAGACTTCTG TTTTCCCGCT GCCTCGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011004--Trimer_LpxA-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	79.34	3.00e-117	415.00
IUUC-Apl-004087	Anas platyrhynchos	69.38	4.00e-85	308.00
IUUC-Aca-005359	Anolis carolinensis	68.75	6.00e-102	364.00
IUUC-Ame-010669	Astyanax mexicanus	27.04	1.00e-13	70.90
IUUC-Bta-013534	Bos taurus	77.92	5.00e-113	400.00
IUUC-Cja-019219	Callithrix jacchus	81.67	2.00e-118	419.00
IUUC-Cfa-020310	Canis familiaris	77.33	8.00e-107	380.00
IUUC-Cpo-021664	Cavia porcellus	80.42	5.00e-117	414.00
IUUC-Csa-024228	Chlorocebus sabaeus	81.67	1.00e-119	422.00
IUUC-Cho-024898	Choloepus hoffmanni	79.37	3.00e-110	392.00
IUUC-Dre-028538	Danio rerio	51.25	7.00e-69	254.00
IUUC-Dno-028861	Dasypus novemcinctus	76.86	5.00e-113	401.00
IUUC-Dor-030111	Dipodomys ordii	82.50	1.00e-119	422.00
IUUC-Ete-032444	Echinops telfairi	82.35	2.00e-39	156.00
IUUC-Eca-033676	Equus caballus	80.00	3.00e-118	418.00
IUUC-Eeu-034571	Erinaceus europaeus	62.50	2.00e-81	296.00
IUUC-Fca-035387	Felis catus	80.99	3.00e-118	418.00
IUUC-Fal-037310	Ficedula albicollis	69.51	1.00e-92	333.00
IUUC-Gmo-039224	Gadus morhua	51.12	4.00e-63	235.00
IUUC-Gga-040957	Gallus gallus	71.88	4.00e-98	351.00
IUUC-Gac-042385	Gasterosteus aculeatus	51.44	2.00e-69	256.00
IUUC-Ggo-044973	Gorilla gorilla	81.07	3.00e-117	415.00
IUUC-Hsa-046842	Homo sapiens	82.08	6.00e-119	421.00
IUUC-Itr-048537	Ictidomys tridecemlineatus	83.21	1.00e-67	247.00
IUUC-Lch-049625	Latimeria chalumnae	61.67	7.00e-88	317.00
IUUC-Loc-052368	Lepisosteus oculatus	52.50	5.00e-73	268.00
IUUC-Laf-053678	Loxodonta africana	75.93	9.00e-111	393.00
IUUC-Mcc-055184	Macaca mulatta	79.65	9.00e-109	387.00
IUUC-Meu-056165	Macropus eugenii	73.99	3.00e-102	365.00
IUUC-Mga-060184	Meleagris gallopavo	70.25	7.00e-65	239.00
IUUC-Mmr-060965	Microcebus murinus	79.58	2.00e-114	405.00
IUUC-Mdo-062702	Monodelphis domestica	76.67	9.00e-114	403.00
IUUC-Mpu-065747	Mustela putorius furo	79.58	2.00e-116	412.00
IUUC-Mlu-067873	Myotis lucifugus	80.99	1.00e-117	416.00
IUUC-Nle-069670	Nomascus leucogenys	81.25	4.00e-117	414.00
IUUC-Opr-070266	Ochotona princeps	70.00	3.00e-97	348.00
IUUC-Ont-071242	Oreochromis niloticus	41.54	2.00e-65	243.00
IUUC-Oan-072879	Ornithorhynchus anatinus	74.55	2.00e-103	369.00
IUUC-Ocu-074872	Oryctolagus cuniculus	77.38	2.00e-98	352.00
IUUC-Ola-087211	Oryzias latipes	42.98	3.00e-49	189.00
IUUC-Oga-088852	Otolemur garnettii	76.67	5.00e-113	401.00
IUUC-Oar-089812	Ovis aries	78.75	1.00e-113	403.00
IUUC-Ptr-091067	Pan troglodytes	82.08	9.00e-119	420.00
IUUC-Pan-091778	Papio anubis	80.50	3.00e-117	415.00
IUUC-Psi-093932	Pelodiscus sinensis	70.85	2.00e-98	352.00
IUUC-Pfo-096845	Poecilia formosa	50.62	5.00e-66	245.00
IUUC-Pab-097892	Pongo abelii	78.65	2.00e-85	309.00
IUUC-Pca-100567	Procavia capensis	63.59	1.00e-68	253.00
IUUC-Pva-102560	Pteropus vampyrus	75.00	5.00e-104	371.00
IUUC-Rno-105662	Rattus norvegicus	93.33	4.00e-133	468.00
IUUC-Sha-107058	Sarcophilus harrisii	73.73	6.00e-106	377.00
IUUC-Sar-113643	Sorex araneus	56.00	1.00e-63	237.00
IUUC-Ssc-115791	Sus scrofa	78.33	2.00e-115	409.00
IUUC-Tgu-117145	Taeniopygia guttata	70.78	4.00e-102	364.00
IUUC-Tru-117875	Takifugu rubripes	52.08	8.00e-70	257.00
IUUC-Tsy-119030	Tarsius syrichta	78.57	5.00e-77	281.00
IUUC-Tni-119761	Tetraodon nigroviridis	51.25	2.00e-68	253.00
IUUC-Tbe-127757	Tupaia belangeri	76.09	2.00e-82	299.00
IUUC-Ttr-128762	Tursiops truncatus	79.58	2.00e-116	412.00
IUUC-Vpa-130360	Vicugna pacos	79.58	1.00e-116	413.00
IUUC-Xtr-131954	Xenopus tropicalis	54.58	6.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence