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Tag Content
iUUCD ID IUUC-Apl-003586
Ensembl Protein ID ENSAPLP00000006461.1
UniProt Accession U3IGT9; U3IGT9_ANAPL
Genbank Protein ID ENSAPLP00000006461
Protein Name Uncharacterized protein
Genbank Nucleotide ID ADON01115797
Gene Name GEMIN5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAPLG00000006816.1 ENSAPLT00000007100.1 ENSAPLP00000006455.1
ENSAPLG00000006816.1 ENSAPLT00000007107.1 ENSAPLP00000006461.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.20e-33 111.4 470 507
UBD/Beta-Prp 1.60e-46 158.5 371 548
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+++t+l++  +  ++lvs+++Dgt +vWD+ +  +
   Q: 470  GHTAKITSLSWspHHeGRLVSACYDGTAQVWDVMKEEP 507
           8***********733699**************977665 PP
   

   UBD/Beta-Prp
   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.......ilvtgseDrtikvwdls........... 82
             t + ++pd++lla g +dg+i+++++ + kll ++++h + ++a++++++         ++++gs  +ti+v +l+           
   Q: 371  ARTEISWKPDGKLLALGNEDGSIEIFQAPSLKLLCTIQQHHKLINAIRWHHEHGsqpelsyLIASGSVNATIYVHNLKsvventsespl 459
           5678999********************************************988999***9**************99999999999999 PP
   S: 83   .tgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlkt 168
              ++++tl+gh+++++sls+sp    +lvs+  d t++vwd+ +++ l    +gh+g   cv+++p + + + +G++D  v  W ++ 
   Q: 460  tITEPFRTLSGHTAKITSLSWSPhHEGRLVSACYDGTAQVWDVMKEEPLC-NYRGHQGRLLCVQWSPVDsDSVYTGADDFYVHKWYISK 547
           8899*******************555***********************9.9*****************9*************999854 PP
   S: 169  g 169
           +
   Q: 548  Q 548
           4 PP
   
Organism Anas platyrhynchos
Protein Sequence
(Fasta)
SYKDGMVIVI DISRKKEILH RLRGHDDEIH CLAWCPVPGE ERLPAWQDEV QEAGEVPNGE 60
LSQDATTKKG CYLASGSKDQ TIRIWSCTRG RSVMTLKLPP TKRRGGAIDP AVKERIWLTV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Apl-003586|E3,WD_repeat;UBD,Beta-Prp|Anas platyrhynchos
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATAGCTTGG CAGTCAGGTT AGATGATATT CCACAAGGAT CCAAGAATCT AGTTTTTAAT 60
TGAAATCTCT GTTTTTAGCT ACAAGGATGG CATGGTGATT GTAATTGACA TCAGCAGGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Apl-003586|E3,WD_repeat;UBD,Beta-Prp|Anas platyrhynchos
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0022625--C:cytosolic large ribosomal subunit
GO:0016020--C:membrane
GO:0016604--C:nuclear body
GO:0032797--C:SMN complex
GO:0034718--C:SMN-Gemin2 complex
GO:0034719--C:SMN-Sm protein complex
GO:0003730--F:mRNA 3'-UTR binding
GO:0043022--F:ribosome binding
GO:0000340--F:RNA 7-methylguanosine cap binding
GO:0030619--F:U1 snRNA binding
GO:0030621--F:U4 snRNA binding
GO:0030622--F:U4atac snRNA binding
GO:0006417--P:regulation of translation
GO:0000387--P:spliceosomal snRNP assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001199 Ailuropoda melanoleuca 62.22 0.00e+00 1602.00
IUUC-Aca-004956 Anolis carolinensis 64.99 0.00e+00 1730.00
IUUC-Ame-010753 Astyanax mexicanus 65.60 0.00e+00 822.00
IUUC-Bta-012315 Bos taurus 62.36 0.00e+00 1607.00
IUUC-Cja-019334 Callithrix jacchus 61.02 0.00e+00 1589.00
IUUC-Cfa-021254 Canis familiaris 62.11 0.00e+00 1632.00
IUUC-Cpo-021984 Cavia porcellus 58.93 0.00e+00 1507.00
IUUC-Csa-023650 Chlorocebus sabaeus 62.04 0.00e+00 1588.00
IUUC-Cho-024860 Choloepus hoffmanni 58.23 0.00e+00 1432.00
IUUC-Cin-025778 Ciona intestinalis 41.28 1.00e-126 447.00
IUUC-Csv-026313 Ciona savignyi 41.67 2.00e-133 469.00
IUUC-Dre-028096 Danio rerio 66.84 0.00e+00 812.00
IUUC-Dno-029799 Dasypus novemcinctus 67.21 0.00e+00 1435.00
IUUC-Dor-030885 Dipodomys ordii 57.83 1.00e-127 451.00
IUUC-Ete-032918 Echinops telfairi 59.35 0.00e+00 1520.00
IUUC-Eca-034144 Equus caballus 61.64 0.00e+00 1608.00
IUUC-Eeu-034843 Erinaceus europaeus 59.08 0.00e+00 1320.00
IUUC-Fca-035948 Felis catus 61.84 0.00e+00 1590.00
IUUC-Fal-037303 Ficedula albicollis 83.87 0.00e+00 2263.00
IUUC-Gmo-039591 Gadus morhua 55.12 0.00e+00 667.00
IUUC-Gga-040570 Gallus gallus 88.05 0.00e+00 2425.00
IUUC-Gac-042646 Gasterosteus aculeatus 47.62 0.00e+00 1165.00
IUUC-Ggo-045605 Gorilla gorilla 61.52 0.00e+00 1147.00
IUUC-Hsa-046122 Homo sapiens 62.25 0.00e+00 1591.00
IUUC-Itr-048094 Ictidomys tridecemlineatus 65.62 0.00e+00 1432.00
IUUC-Lch-050489 Latimeria chalumnae 45.92 0.00e+00 668.00
IUUC-Loc-052259 Lepisosteus oculatus 64.84 0.00e+00 769.00
IUUC-Laf-053338 Loxodonta africana 62.80 0.00e+00 1610.00
IUUC-Mcc-055442 Macaca mulatta 61.81 0.00e+00 1589.00
IUUC-Meu-056245 Macropus eugenii 57.82 0.00e+00 667.00
IUUC-Mga-060202 Meleagris gallopavo 87.04 0.00e+00 2344.00
IUUC-Mmr-061730 Microcebus murinus 60.96 0.00e+00 1566.00
IUUC-Mdo-062880 Monodelphis domestica 66.03 0.00e+00 1731.00
IUUC-Mmu-063930 Mus musculus 60.40 0.00e+00 1517.00
IUUC-Mpu-066605 Mustela putorius furo 61.53 0.00e+00 1600.00
IUUC-Mlu-067765 Myotis lucifugus 62.37 0.00e+00 1637.00
IUUC-Nle-069183 Nomascus leucogenys 61.18 0.00e+00 1546.00
IUUC-Opr-070659 Ochotona princeps 51.64 0.00e+00 735.00
IUUC-Ont-072356 Oreochromis niloticus 64.89 0.00e+00 808.00
IUUC-Oan-073056 Ornithorhynchus anatinus 65.33 0.00e+00 1702.00
IUUC-Ocu-073881 Oryctolagus cuniculus 61.94 0.00e+00 1657.00
IUUC-Ola-087120 Oryzias latipes 64.29 6.00e-14 70.10
IUUC-Olu-087648 Ostreococcus lucimarinus 27.17 5.00e-35 143.00
IUUC-Oga-088343 Otolemur garnettii 62.12 0.00e+00 1610.00
IUUC-Oar-089257 Ovis aries 63.17 0.00e+00 1634.00
IUUC-Ptr-090497 Pan troglodytes 62.10 0.00e+00 1582.00
IUUC-Pan-092638 Papio anubis 61.64 0.00e+00 1576.00
IUUC-Psi-093096 Pelodiscus sinensis 74.07 0.00e+00 1912.00
IUUC-Pma-094571 Petromyzon marinus 52.85 3.00e-65 242.00
IUUC-Pfo-096742 Poecilia formosa 48.23 0.00e+00 1207.00
IUUC-Pab-098153 Pongo abelii 61.08 0.00e+00 1587.00
IUUC-Pca-100957 Procavia capensis 59.67 0.00e+00 1483.00
IUUC-Pva-102439 Pteropus vampyrus 61.95 0.00e+00 1638.00
IUUC-Rno-105891 Rattus norvegicus 60.32 0.00e+00 1500.00
IUUC-Sha-107181 Sarcophilus harrisii 65.59 0.00e+00 1705.00
IUUC-Ssc-115413 Sus scrofa 61.97 0.00e+00 1618.00
IUUC-Tgu-117082 Taeniopygia guttata 83.96 0.00e+00 2182.00
IUUC-Tru-118491 Takifugu rubripes 62.70 0.00e+00 751.00
IUUC-Tsy-119629 Tarsius syrichta 71.28 1.00e-127 451.00
IUUC-Tni-120240 Tetraodon nigroviridis 64.50 0.00e+00 792.00
IUUC-Tbe-127673 Tupaia belangeri 54.16 0.00e+00 1273.00
IUUC-Ttr-128562 Tursiops truncatus 60.10 0.00e+00 1521.00
IUUC-Vpa-130596 Vicugna pacos 66.00 0.00e+00 1222.00
IUUC-Xtr-132469 Xenopus tropicalis 55.71 0.00e+00 1439.00
Created Date 25-Jun-2017

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