• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Cpo-022379
UUCD1 version UUC-CaP-00952
Ensembl Protein ID ENSCPOP00000020974.1
UniProt Accession H0WDA2; H0WDA2_CAVPO
Genbank Protein ID ENSCPOP00000020974
Protein Name Uncharacterized protein
Genbank Nucleotide ID AAKN02045304
Gene Name PRPF19
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000020688.1 ENSCPOT00000022885.1 ENSCPOP00000020974.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 1.50e-15 57.0 3 64
E3 adaptor/Cullin RING/DCX/DWD 3.80e-32 108.9 390 423
UBD/Beta-Prp 1.80e-53 181.6 231 461
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           ++C+Is+e++++P+v+p s+++y+r+ Iek++a++g+ +P+++qpl+ee+l++ ++ + +  +
   Q: 3    LICSISNEVPEHPCVSPvSNHVYERRLIEKYIAENGT-DPINNQPLSEEQLIDIKVAHPIRPK 64
           79**********************************9.***************9998877665 PP
   

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH++++t++af  ++ +l++++dD ++k+WDlr+
   Q: 390  GHSGPITSIAFseNGYYLATAADDSSVKLWDLRK 423
           8**********976699**************986 PP
   

   UBD/Beta-Prp
   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
             d++ ++tg++d+ + v+d ++++ l++l+gh+++vt+v f+p++++  ++s D+ti++w++ + +cv+++++he+ v+ ls++++gd
   Q: 231  PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGD 319
           568899*********************************************************************************** PP
   S: 108  klvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           +l+s s+d++    d++tg +l + t++    + +c+++hpdg ++ +G+ D+++++Wdlk  + +  + g h ++++s++f++ng +l
   Q: 320  YLLSSSDDQYWAFSDIQTGRVLTKvTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG-HSGPITSIAFSENGYYL 407
           **********************997777777789************************************9.***************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnghtd.nvksvrfspnderlvsgssDgsiri 248
           +++++d++vklwdl++ +  +tl+  ++  vks+ f++ +++l+ g+ D +i+i
   Q: 408  ATAADDSSVKLWDLRKLKNFKTLQLDNNfEVKSLIFDQSGTYLALGGTDVQIYI 461
           ***************999999999866527*******************99987 PP
   
Organism Cavia porcellus
Protein Sequence
(Fasta)
MSLICSISNE VPEHPCVSPV SNHVYERRLI EKYIAENGTD PINNQPLSEE QLIDIKVAHP 60
IRPKPPSATS IPAILKALQD EWDAVMLHSF TLRQQLQTTR QELSHALYQH DAACRVIARL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cpo-022379|E3,U-box;E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCCCTGA TCTGCTCCAG TGAGTGCCGC CGCGGTCGGA GGCGGGCGGG CGGGCGGGTC 60
GCGGGCAAGG TTTCCAGCGA GCGGGTGTGG AAGGAGGCAG CCGGATAGGG GACGAGGCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cpo-022379|E3,U-box;E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013915--Pre-mRNA_splic_Prp19
IPR000772--Ricin_B_lectin
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50231--RICIN_B_LECTIN
PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08606--Prp19
PF04564--U-box
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00504--Ubox
SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0005662--C:DNA replication factor A complex
GO:0005811--C:lipid particle
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0000974--C:Prp19 complex
GO:0035861--C:site of double-strand break
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0034613--P:cellular protein localization
GO:0006303--P:double-strand break repair via nonhomologous end joining
GO:0001833--P:inner cell mass cell proliferation
GO:0008610--P:lipid biosynthetic process
GO:0045665--P:negative regulation of neuron differentiation
GO:0048711--P:positive regulation of astrocyte differentiation
GO:0048026--P:positive regulation of mRNA splicing, via spliceosome
GO:0010498--P:proteasomal protein catabolic process
GO:0070534--P:protein K63-linked ubiquitination
GO:0072422--P:signal transduction involved in DNA damage checkpoint
GO:0000245--P:spliceosomal complex assembly
GO:0000244--P:spliceosomal tri-snRNP complex assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000488 Aegilops tauschii 39.49 2.00e-97 350.00
IUUC-Aml-001230 Ailuropoda melanoleuca 95.99 0.00e+00 957.00
IUUC-Atr-002594 Amborella trichopoda 44.42 1.00e-119 423.00
IUUC-Apl-003686 Anas platyrhynchos 87.85 0.00e+00 732.00
IUUC-Aca-005272 Anolis carolinensis 97.82 0.00e+00 1004.00
IUUC-Aly-005586 Arabidopsis lyrata 43.71 4.00e-119 421.00
IUUC-Ath-007696 Arabidopsis thaliana 43.99 4.00e-115 408.00
IUUC-Acl-008335 Aspergillus clavatus 36.13 4.00e-68 252.00
IUUC-Afl-008527 Aspergillus flavus 38.19 2.00e-73 269.00
IUUC-Afu-008957 Aspergillus fumigatus 38.32 3.00e-79 288.00
IUUC-Ani-009280 Aspergillus nidulans 38.45 4.00e-67 248.00
IUUC-Ang-009746 Aspergillus niger 36.50 1.00e-67 250.00
IUUC-Aor-009905 Aspergillus oryzae 37.97 6.00e-77 281.00
IUUC-Ate-010412 Aspergillus terreus 37.97 8.00e-66 244.00
IUUC-Ame-011561 Astyanax mexicanus 85.00 1.00e-111 395.00
IUUC-Bgr-012283 Blumeria graminis 32.85 8.00e-57 214.00
IUUC-Bta-013242 Bos taurus 99.60 0.00e+00 1014.00
IUUC-Bci-013901 Botrytis cinerea 34.00 2.00e-65 243.00
IUUC-Bdi-014277 Brachypodium distachyon 43.76 7.00e-124 437.00
IUUC-Bol-016207 Brassica oleracea 45.35 3.00e-118 418.00
IUUC-Bra-017902 Brassica rapa 43.33 3.00e-116 412.00
IUUC-Cel-018271 Caenorhabditis elegans 51.58 2.00e-152 531.00
IUUC-Cja-019879 Callithrix jacchus 99.01 0.00e+00 1007.00
IUUC-Cfa-020175 Canis familiaris 99.21 0.00e+00 1012.00
IUUC-Cre-022993 Chlamydomonas reinhardtii 39.96 1.00e-98 353.00
IUUC-Csa-023500 Chlorocebus sabaeus 99.40 0.00e+00 1013.00
IUUC-Cho-025065 Choloepus hoffmanni 87.46 1.00e-148 518.00
IUUC-Cin-025699 Ciona intestinalis 68.12 1.00e-175 609.00
IUUC-Csv-026128 Ciona savignyi 65.38 0.00e+00 681.00
IUUC-Cgl-026507 Colletotrichum gloeosporioides 33.40 1.00e-65 243.00
IUUC-Cne-026860 Cryptococcus neoformans 38.09 2.00e-93 336.00
IUUC-Dre-028187 Danio rerio 85.15 0.00e+00 864.00
IUUC-Dno-029453 Dasypus novemcinctus 99.21 0.00e+00 1011.00
IUUC-Dor-030150 Dipodomys ordii 100.00 1.00e-129 456.00
IUUC-Dse-031220 Dothistroma septosporum 31.40 1.00e-58 220.00
IUUC-Dme-031906 Drosophila melanogaster 65.74 0.00e+00 665.00
IUUC-Ete-033035 Echinops telfairi 86.71 0.00e+00 860.00
IUUC-Eca-033478 Equus caballus 99.40 0.00e+00 1012.00
IUUC-Eeu-034974 Erinaceus europaeus 99.39 0.00e+00 679.00
IUUC-Fca-036194 Felis catus 98.41 0.00e+00 1002.00
IUUC-Fal-037417 Ficedula albicollis 97.02 0.00e+00 998.00
IUUC-Fox-037922 Fusarium oxysporum 34.82 1.00e-64 240.00
IUUC-Fso-038256 Fusarium solani 34.34 6.00e-66 244.00
IUUC-Gmo-038713 Gadus morhua 86.34 0.00e+00 878.00
IUUC-Ggr-039854 Gaeumannomyces graminis 32.44 2.00e-54 206.00
IUUC-Gga-041143 Gallus gallus 97.02 0.00e+00 998.00
IUUC-Gac-042129 Gasterosteus aculeatus 85.15 0.00e+00 893.00
IUUC-Gma-044273 Glycine max 45.77 9.00e-122 430.00
IUUC-Ggo-045262 Gorilla gorilla 99.40 0.00e+00 1013.00
IUUC-Hsa-046036 Homo sapiens 99.40 0.00e+00 1013.00
IUUC-Hvu-047442 Hordeum vulgare 43.12 6.00e-69 254.00
IUUC-Itr-048169 Ictidomys tridecemlineatus 99.21 0.00e+00 972.00
IUUC-Lch-050105 Latimeria chalumnae 90.28 0.00e+00 941.00
IUUC-Lpe-050976 Leersia perrieri 44.23 2.00e-119 422.00
IUUC-Loc-052042 Lepisosteus oculatus 74.41 0.00e+00 667.00
IUUC-Lma-053143 Leptosphaeria maculans 34.06 5.00e-64 239.00
IUUC-Laf-053451 Loxodonta africana 95.78 0.00e+00 1001.00
IUUC-Mcc-055786 Macaca mulatta 99.40 0.00e+00 1013.00
IUUC-Meu-056161 Macropus eugenii 98.34 3.00e-140 491.00
IUUC-Mor-057215 Magnaporthe oryzae 33.66 9.00e-58 217.00
IUUC-Mpo-057419 Magnaporthe poae 31.48 4.00e-51 195.00
IUUC-Mtr-057756 Medicago truncatula 44.27 5.00e-117 414.00
IUUC-Mla-059085 Melampsora laricipopulina 38.20 3.00e-86 312.00
IUUC-Mga-060158 Meleagris gallopavo 90.18 0.00e+00 884.00
IUUC-Mvi-060441 Microbotryum violaceum 37.93 1.00e-78 286.00
IUUC-Mmr-061085 Microcebus murinus 99.40 0.00e+00 1013.00
IUUC-Mdo-061804 Monodelphis domestica 99.01 0.00e+00 1010.00
IUUC-Mmu-063608 Mus musculus 95.98 0.00e+00 1002.00
IUUC-Mac-064972 Musa acuminata 44.42 2.00e-117 416.00
IUUC-Mpu-065700 Mustela putorius furo 99.21 0.00e+00 1012.00
IUUC-Mlu-068223 Myotis lucifugus 94.80 0.00e+00 989.00
IUUC-Nfi-068504 Neosartorya fischeri 38.11 5.00e-79 288.00
IUUC-Ncr-068729 Neurospora crassa 36.90 2.00e-63 236.00
IUUC-Nle-069754 Nomascus leucogenys 99.40 0.00e+00 1013.00
IUUC-Opr-070621 Ochotona princeps 95.37 0.00e+00 949.00
IUUC-Ont-071377 Oreochromis niloticus 85.15 0.00e+00 872.00
IUUC-Oan-073498 Ornithorhynchus anatinus 72.92 4.00e-122 431.00
IUUC-Ocu-074182 Oryctolagus cuniculus 95.43 0.00e+00 1000.00
IUUC-Oba-075509 Oryza barthii 43.76 6.00e-122 431.00
IUUC-Obr-076480 Oryza brachyantha 44.72 5.00e-123 434.00
IUUC-Ogl-077052 Oryza glaberrima 43.76 6.00e-122 431.00
IUUC-Ogu-078919 Oryza glumaepatula 43.76 5.00e-122 431.00
IUUC-Oin-079357 Oryza indica 43.05 4.00e-115 408.00
IUUC-Olo-080376 Oryza longistaminata 43.53 6.00e-110 390.00
IUUC-Ome-081973 Oryza meridionalis 43.03 8.00e-110 390.00
IUUC-Oni-082849 Oryza nivara 43.95 1.00e-122 433.00
IUUC-Opu-083243 Oryza punctata 43.57 2.00e-121 429.00
IUUC-Oru-084613 Oryza rufipogon 44.04 7.00e-122 431.00
IUUC-Osa-085407 Oryza sativa 43.74 2.00e-121 429.00
IUUC-Ola-086566 Oryzias latipes 84.31 0.00e+00 863.00
IUUC-Olu-087757 Ostreococcus lucimarinus 39.12 3.00e-94 338.00
IUUC-Oga-089010 Otolemur garnettii 94.67 0.00e+00 960.00
IUUC-Oar-089638 Ovis aries 99.60 0.00e+00 1014.00
IUUC-Ptr-091141 Pan troglodytes 99.40 0.00e+00 1013.00
IUUC-Pan-092662 Papio anubis 99.40 0.00e+00 1013.00
IUUC-Psi-093777 Pelodiscus sinensis 97.14 0.00e+00 822.00
IUUC-Pno-095115 Phaeosphaeria nodorum 35.08 2.00e-65 243.00
IUUC-Ppa-095841 Physcomitrella patens 45.17 2.00e-121 429.00
IUUC-Pfo-096390 Poecilia formosa 84.36 0.00e+00 871.00
IUUC-Pab-098250 Pongo abelii 97.94 0.00e+00 947.00
IUUC-Pop-099854 Populus trichocarpa 45.09 2.00e-120 426.00
IUUC-Pca-100553 Procavia capensis 98.81 0.00e+00 1003.00
IUUC-Ppe-101383 Prunus persica 43.82 8.00e-114 404.00
IUUC-Pva-102189 Pteropus vampyrus 99.40 0.00e+00 1014.00
IUUC-Pgr-103304 Puccinia graminis 37.38 5.00e-84 305.00
IUUC-Ptt-103984 Puccinia triticina 37.69 8.00e-89 320.00
IUUC-Pte-104385 Pyrenophora teres 33.12 5.00e-69 254.00
IUUC-Pyt-104697 Pyrenophora triticirepentis 33.54 3.00e-70 259.00
IUUC-Rno-105581 Rattus norvegicus 99.60 0.00e+00 1015.00
IUUC-Sha-107071 Sarcophilus harrisii 94.87 0.00e+00 998.00
IUUC-Sja-107697 Schizosaccharomyces japonicus 31.34 3.00e-35 142.00
IUUC-Spo-108315 Schizosaccharomyces pombe 32.40 7.00e-46 177.00
IUUC-Ssl-108628 Sclerotinia sclerotiorum 35.16 1.00e-64 240.00
IUUC-Smo-109648 Selaginella moellendorffii 44.96 1.00e-121 429.00
IUUC-Sit-109873 Setaria italica 43.57 3.00e-119 422.00
IUUC-Sly-111673 Solanum lycopersicum 45.35 4.00e-113 401.00
IUUC-Stu-112125 Solanum tuberosum 45.16 2.00e-112 399.00
IUUC-Sbi-114696 Sorghum bicolor 41.79 5.00e-108 384.00
IUUC-Sre-115134 Sporisorium reilianum 31.12 7.00e-71 261.00
IUUC-Ssc-116260 Sus scrofa 99.40 0.00e+00 1014.00
IUUC-Tgu-116533 Taeniopygia guttata 97.02 0.00e+00 998.00
IUUC-Tru-117800 Takifugu rubripes 84.55 0.00e+00 895.00
IUUC-Tsy-118980 Tarsius syrichta 93.47 0.00e+00 918.00
IUUC-Tni-120334 Tetraodon nigroviridis 68.12 0.00e+00 703.00
IUUC-Tca-121807 Theobroma cacao 44.12 1.00e-120 426.00
IUUC-Tre-121920 Trichoderma reesei 33.40 3.00e-63 236.00
IUUC-Tvi-122294 Trichoderma virens 33.05 1.00e-55 210.00
IUUC-Tae-125713 Triticum aestivum 44.15 8.00e-125 440.00
IUUC-Tur-126664 Triticum urartu 39.72 2.00e-114 406.00
IUUC-Tme-127026 Tuber melanosporum 34.07 9.00e-69 254.00
IUUC-Tbe-127582 Tupaia belangeri 99.09 0.00e+00 676.00
IUUC-Ttr-128313 Tursiops truncatus 99.21 0.00e+00 1004.00
IUUC-Uma-129626 Ustilago maydis 32.96 2.00e-73 270.00
IUUC-Vda-129699 Verticillium dahliae 34.79 1.00e-67 250.00
IUUC-Vpa-130593 Vicugna pacos 99.12 0.00e+00 902.00
IUUC-Vvi-131668 Vitis vinifera 44.21 1.00e-119 423.00
IUUC-Xtr-132186 Xenopus tropicalis 85.42 0.00e+00 770.00
IUUC-Xma-133212 Xiphophorus maculatus 84.16 0.00e+00 866.00
IUUC-Yli-134607 Yarrowia lipolytica 57.58 2.00e-41 160.00
IUUC-Zma-135662 Zea mays 44.81 6.00e-122 431.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved