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Tag Content
iUUCD ID IUUC-Bra-016848
Ensembl Protein ID Bra020355.1-P
UniProt Accession M4DV12; M4DV12_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020355 Bra020355.1 Bra020355.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-18 66.9 159 190
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
    H+ +vtcl+f +++l+sG g+i vWD+
   Q: 159 HSRRVTCLEFhptRNNILLSGDKKGQIGVWDF 190
    999********653399**************5 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MGLTRNRRKK EPEIVIARDT ESSSSEEEDD YPLSESEKED EEVKIELDKS KAKGKAPITV 60
KLKKVCKVCK QPGHEAGFKG ATYIDCPMKP CFLCKMPGHT TMSCPHRVVT DQGILPTSHR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-016848|E3,WD_repeat|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGGTTTAA CGAGGAACAG AAGAAAAAAG GAACCAGAAA TCGTCATTGC CAGGGATACA 60
GAGTCAAGTT CGTCTGAAGA GGAAGATGAT TACCCTTTGT CGGAGTCTGA GAAAGAAGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-016848|E3,WD_repeat|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000470 Aegilops tauschii 64.30 0.00e+00 629.00
IUUC-Aml-002203 Ailuropoda melanoleuca 30.37 1.00e-33 136.00
IUUC-Atr-002957 Amborella trichopoda 69.33 0.00e+00 660.00
IUUC-Apl-003832 Anas platyrhynchos 33.44 9.00e-40 157.00
IUUC-Aca-004358 Anolis carolinensis 31.58 4.00e-43 169.00
IUUC-Aly-006296 Arabidopsis lyrata 87.68 0.00e+00 894.00
IUUC-Ath-007115 Arabidopsis thaliana 85.69 0.00e+00 853.00
IUUC-Ame-010817 Astyanax mexicanus 32.61 8.00e-43 167.00
IUUC-Bta-012914 Bos taurus 31.00 1.00e-37 150.00
IUUC-Bdi-014261 Brachypodium distachyon 65.12 0.00e+00 634.00
IUUC-Bol-015317 Brassica oleracea 93.41 0.00e+00 933.00
IUUC-Cja-018967 Callithrix jacchus 29.70 6.00e-35 141.00
IUUC-Cfa-021238 Canis familiaris 30.77 5.00e-32 131.00
IUUC-Cpo-022063 Cavia porcellus 30.98 1.00e-34 140.00
IUUC-Csa-023382 Chlorocebus sabaeus 29.70 1.00e-34 140.00
IUUC-Csv-026179 Ciona savignyi 23.53 2.00e-07 50.40
IUUC-Cne-027093 Cryptococcus neoformans 24.14 7.00e-09 55.50
IUUC-Dre-028732 Danio rerio 32.10 4.00e-35 142.00
IUUC-Dor-030461 Dipodomys ordii 35.56 6.00e-30 124.00
IUUC-Ete-033038 Echinops telfairi 30.79 2.00e-33 136.00
IUUC-Eca-033772 Equus caballus 30.98 2.00e-35 143.00
IUUC-Fca-036095 Felis catus 29.75 1.00e-32 133.00
IUUC-Gmo-039683 Gadus morhua 33.64 1.00e-45 177.00
IUUC-Gga-040530 Gallus gallus 33.94 4.00e-40 159.00
IUUC-Gac-041517 Gasterosteus aculeatus 32.11 3.00e-37 149.00
IUUC-Gma-043378 Glycine max 74.27 0.00e+00 728.00
IUUC-Ggo-045364 Gorilla gorilla 30.30 1.00e-35 143.00
IUUC-Hsa-046354 Homo sapiens 30.30 1.00e-35 143.00
IUUC-Hvu-047151 Hordeum vulgare 71.43 2.00e-122 431.00
IUUC-Itr-048304 Ictidomys tridecemlineatus 31.90 7.00e-37 147.00
IUUC-Lpe-051256 Leersia perrieri 64.66 5.00e-177 613.00
IUUC-Loc-052398 Lepisosteus oculatus 31.68 4.00e-40 158.00
IUUC-Laf-053562 Loxodonta africana 32.00 1.00e-36 147.00
IUUC-Mcc-055197 Macaca mulatta 29.79 1.00e-29 123.00
IUUC-Meu-056151 Macropus eugenii 31.45 2.00e-31 129.00
IUUC-Mtr-057940 Medicago truncatula 73.98 0.00e+00 697.00
IUUC-Mga-059923 Meleagris gallopavo 34.04 2.00e-42 166.00
IUUC-Mmr-061465 Microcebus murinus 31.32 1.00e-30 126.00
IUUC-Mdo-063063 Monodelphis domestica 32.73 1.00e-40 160.00
IUUC-Mmu-064294 Mus musculus 31.69 2.00e-36 146.00
IUUC-Mac-065598 Musa acuminata 68.53 0.00e+00 656.00
IUUC-Mpu-066831 Mustela putorius furo 29.75 9.00e-32 130.00
IUUC-Mlu-067222 Myotis lucifugus 30.67 3.00e-34 139.00
IUUC-Nle-069581 Nomascus leucogenys 30.61 4.00e-36 145.00
IUUC-Opr-070644 Ochotona princeps 32.31 2.00e-36 145.00
IUUC-Ont-072605 Oreochromis niloticus 32.30 6.00e-40 158.00
IUUC-Oan-072973 Ornithorhynchus anatinus 33.03 2.00e-40 159.00
IUUC-Ocu-074615 Oryctolagus cuniculus 31.60 4.00e-36 145.00
IUUC-Oba-075283 Oryza barthii 63.79 1.00e-170 592.00
IUUC-Obr-076605 Oryza brachyantha 66.00 0.00e+00 635.00
IUUC-Ogl-077512 Oryza glaberrima 64.76 2.00e-175 608.00
IUUC-Ogu-078329 Oryza glumaepatula 64.00 8.00e-171 593.00
IUUC-Oin-079980 Oryza indica 64.00 1.00e-170 592.00
IUUC-Olo-080516 Oryza longistaminata 64.80 3.00e-171 594.00
IUUC-Ome-081415 Oryza meridionalis 64.00 6.00e-175 607.00
IUUC-Oni-082985 Oryza nivara 64.00 1.00e-170 592.00
IUUC-Opu-084159 Oryza punctata 66.00 0.00e+00 634.00
IUUC-Oru-085137 Oryza rufipogon 64.56 1.00e-176 612.00
IUUC-Osa-085614 Oryza sativa 65.03 1.00e-176 612.00
IUUC-Ola-087044 Oryzias latipes 33.02 1.00e-41 163.00
IUUC-Oga-088274 Otolemur garnettii 31.91 1.00e-36 147.00
IUUC-Oar-089826 Ovis aries 31.00 2.00e-37 149.00
IUUC-Ptr-091631 Pan troglodytes 30.30 1.00e-35 143.00
IUUC-Pan-092535 Papio anubis 29.70 3.00e-35 142.00
IUUC-Psi-093815 Pelodiscus sinensis 32.21 3.00e-37 149.00
IUUC-Pma-094474 Petromyzon marinus 32.73 5.00e-38 151.00
IUUC-Ppa-095414 Physcomitrella patens 60.14 3.00e-163 568.00
IUUC-Pfo-096559 Poecilia formosa 33.33 2.00e-40 160.00
IUUC-Pab-098528 Pongo abelii 30.30 2.00e-35 143.00
IUUC-Pop-100064 Populus trichocarpa 75.25 0.00e+00 739.00
IUUC-Pca-100803 Procavia capensis 31.08 5.00e-36 145.00
IUUC-Ppe-101966 Prunus persica 74.13 0.00e+00 717.00
IUUC-Pva-103213 Pteropus vampyrus 30.98 2.00e-36 146.00
IUUC-Rno-105087 Rattus norvegicus 32.01 1.00e-37 150.00
IUUC-Sha-107466 Sarcophilus harrisii 33.73 1.00e-42 167.00
IUUC-Smo-108958 Selaginella moellendorffii 55.96 4.00e-153 534.00
IUUC-Sit-109968 Setaria italica 67.29 6.00e-171 593.00
IUUC-Sly-111495 Solanum lycopersicum 72.33 0.00e+00 694.00
IUUC-Sar-113272 Sorex araneus 30.09 8.00e-34 137.00
IUUC-Sbi-114706 Sorghum bicolor 62.47 3.00e-160 557.00
IUUC-Ssc-115437 Sus scrofa 31.91 3.00e-33 135.00
IUUC-Tgu-116602 Taeniopygia guttata 32.31 3.00e-40 159.00
IUUC-Tru-118698 Takifugu rubripes 33.13 8.00e-36 144.00
IUUC-Tsy-119027 Tarsius syrichta 30.21 3.00e-28 119.00
IUUC-Tni-119787 Tetraodon nigroviridis 31.46 1.00e-43 170.00
IUUC-Tca-121447 Theobroma cacao 75.97 0.00e+00 708.00
IUUC-Tae-124613 Triticum aestivum 67.29 0.00e+00 633.00
IUUC-Tur-126724 Triticum urartu 66.75 0.00e+00 629.00
IUUC-Tbe-127680 Tupaia belangeri 28.98 2.00e-26 113.00
IUUC-Vvi-131001 Vitis vinifera 78.24 0.00e+00 721.00
IUUC-Xtr-132266 Xenopus tropicalis 33.95 4.00e-43 168.00
IUUC-Xma-133034 Xiphophorus maculatus 32.92 5.00e-39 155.00
Created Date 25-Jun-2017

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