iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cre-022736

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transcription initiation factor TFIID, subunit TAF5

Genbank Nucleotide ID

DS496138

Gene Name

CHLREDRAFT_150691

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_150691	EDP00682	EDP00682

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-31	105.6	214	251
UBD/Beta-Prp	1.90e-49	168.0	130	427

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ v++++f  d +l++sGs Dgt++vW    g +l
   Q: 214  GHTAAVHAVDFsVDqRLVLSGSSDGTVRVWGAEFGSCL 251
           8***********7779**************98887776 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl............................................lrslsgheaevtavkfspdgki 66
           k+ ++c +f  d+s +++g+ d++++v+d+ t +                                                l gh+a+v av+fs d+ +
   Q: 130  KQTLNCSTFNCDGSKIVAGFNDSSVRVYDMPTISQhhallrrsrrgqvpggggggtnpdgtpapappsaddleeseppgTLYLHGHTAAVHAVDFSVDQRL 230
           66789999999*******************99888888999999999999999999999999999999999999999877778899999************ PP
   S: 67   lvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllv..sGslDrtvrlWd 165
            ++gs+D+t++vw  + g+c+ ++ gh + v++++ +p g++++s+++dr++r+w  e  q l+ +l gh++ v +v++hp+++l++  +G +DrtvrlWd
   Q: 231  VLSGSSDGTVRVWGAEFGSCLAVYPGHVFPVWDVAACPLGHWFASAGADRVARLWVSERTQPLR-LLVGHNADVDVVRWHPNCCLVAtaAGQADRTVRLWD 330
           ***************************************************************9.******************777522699********* PP
   S: 166  lktgkllrtl...tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt...lnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgdl 256
           ++ gk++r l   +    +s ++l+++++g ++++gs+ g v++wdl t + v +     +ht  v+s++ s  ++  l+sg++D+++r+W  ++g+ 
   Q: 331  VREGKCVRYLpcgRA-LPGSPTCLALSPDGSHIAAGSDEGGVTVWDLGTARRVAAappSAAHTGAVWSLAYSqGDGCVLASGGADETVRLWRNDTGEA 427
           ************665.9*******************************8887555111679***********6677899************5566665 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MVNRTEIKLG LLQGNVEDMY REQQEKHKAE AAAAAAAAAA AGEADPAAAD GQEPQTKKAK 60
KAAEKAAAAA AAAAATSKSV VRGERIEHPP FLPRLPDEVV SAALRDISLR APVTAATPPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCAACC GCACCGAGAT AAAGCTGGGG CTGCTGCAGG TGCGCCGCAT GGGGCGTGTG 60
TGTGCGAGTG CTAGGGAAGC GCAAGGGAGG GAGGCGGTGT CTTTGCGTGC ATGTGTGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0003743--F:translation initiation factor activity

KEGG

cre:CHLREDRAFT_150691

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	43.56	6.00e-49	187.00
IUUC-Aml-001607	Ailuropoda melanoleuca	40.52	2.00e-55	209.00
IUUC-Atr-003136	Amborella trichopoda	39.29	2.00e-68	251.00
IUUC-Apl-004193	Anas platyrhynchos	40.07	4.00e-56	211.00
IUUC-Aca-004522	Anolis carolinensis	39.22	2.00e-55	209.00
IUUC-Aly-006476	Arabidopsis lyrata	41.26	4.00e-62	231.00
IUUC-Ath-006587	Arabidopsis thaliana	40.48	5.00e-62	230.00
IUUC-Ago-007736	Ashbya gossypii	36.51	3.00e-53	201.00
IUUC-Acl-008092	Aspergillus clavatus	33.87	5.00e-46	177.00
IUUC-Afl-008659	Aspergillus flavus	34.19	9.00e-47	179.00
IUUC-Afu-008902	Aspergillus fumigatus	34.50	2.00e-46	179.00
IUUC-Ani-009462	Aspergillus nidulans	36.31	4.00e-47	180.00
IUUC-Aor-010083	Aspergillus oryzae	34.19	9.00e-47	179.00
IUUC-Ate-010271	Aspergillus terreus	34.82	1.00e-46	179.00
IUUC-Ame-010721	Astyanax mexicanus	38.32	1.00e-58	219.00
IUUC-Bgr-012257	Blumeria graminis	33.65	9.00e-43	166.00
IUUC-Bta-013539	Bos taurus	38.94	1.00e-55	209.00
IUUC-Bci-013737	Botrytis cinerea	33.23	4.00e-45	174.00
IUUC-Bdi-015041	Brachypodium distachyon	42.26	2.00e-63	235.00
IUUC-Bol-015483	Brassica oleracea	40.59	3.00e-62	231.00
IUUC-Bra-017147	Brassica rapa	40.59	3.00e-62	231.00
IUUC-Cel-018451	Caenorhabditis elegans	30.90	6.00e-36	144.00
IUUC-Cja-018881	Callithrix jacchus	38.94	1.00e-55	209.00
IUUC-Cfa-020056	Canis familiaris	40.52	2.00e-55	209.00
IUUC-Cpo-021454	Cavia porcellus	38.63	4.00e-55	207.00
IUUC-Csa-023045	Chlorocebus sabaeus	38.94	7.00e-56	209.00
IUUC-Cho-024284	Choloepus hoffmanni	38.72	5.00e-47	180.00
IUUC-Cin-025457	Ciona intestinalis	44.95	1.00e-46	177.00
IUUC-Csv-025882	Ciona savignyi	37.21	2.00e-48	185.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	29.75	7.00e-39	154.00
IUUC-Cne-026876	Cryptococcus neoformans	43.98	2.00e-40	159.00
IUUC-Cme-027302	Cyanidioschyzon merolae	38.99	3.00e-55	208.00
IUUC-Dre-027980	Danio rerio	39.56	2.00e-60	225.00
IUUC-Dno-028863	Dasypus novemcinctus	40.52	8.00e-56	210.00
IUUC-Dor-030561	Dipodomys ordii	38.94	8.00e-56	210.00
IUUC-Dse-031547	Dothistroma septosporum	34.47	6.00e-45	174.00
IUUC-Dme-031917	Drosophila melanogaster	34.78	3.00e-48	184.00
IUUC-Ete-032712	Echinops telfairi	30.03	1.00e-37	149.00
IUUC-Eca-033927	Equus caballus	38.94	2.00e-55	208.00
IUUC-Eeu-034449	Erinaceus europaeus	40.52	2.00e-55	208.00
IUUC-Fca-036325	Felis catus	38.94	2.00e-55	209.00
IUUC-Fal-036604	Ficedula albicollis	39.94	5.00e-55	207.00
IUUC-Fox-038049	Fusarium oxysporum	32.19	2.00e-33	135.00
IUUC-Fso-038302	Fusarium solani	33.55	5.00e-38	150.00
IUUC-Gmo-038832	Gadus morhua	38.17	1.00e-57	216.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.57	9.00e-35	140.00
IUUC-Gga-041147	Gallus gallus	40.20	3.00e-56	211.00
IUUC-Gac-041373	Gasterosteus aculeatus	37.69	3.00e-56	211.00
IUUC-Gma-043817	Glycine max	35.75	7.00e-66	243.00
IUUC-Ggo-044568	Gorilla gorilla	29.79	2.00e-37	149.00
IUUC-Hsa-045971	Homo sapiens	40.52	9.00e-56	209.00
IUUC-Hvu-047695	Hordeum vulgare	41.40	2.00e-64	238.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	40.52	1.00e-55	209.00
IUUC-Kpa-049402	Komagataella pastoris	36.76	2.00e-54	205.00
IUUC-Lch-049526	Latimeria chalumnae	38.89	2.00e-54	205.00
IUUC-Lpe-051560	Leersia perrieri	40.18	4.00e-69	254.00
IUUC-Loc-052882	Lepisosteus oculatus	38.51	3.00e-58	218.00
IUUC-Lma-053212	Leptosphaeria maculans	34.19	6.00e-41	160.00
IUUC-Laf-053859	Loxodonta africana	38.94	2.00e-55	209.00
IUUC-Mcc-054957	Macaca mulatta	40.52	9.00e-56	209.00
IUUC-Meu-056182	Macropus eugenii	32.15	6.00e-38	150.00
IUUC-Mor-057024	Magnaporthe oryzae	30.59	4.00e-37	148.00
IUUC-Mpo-057520	Magnaporthe poae	29.18	2.00e-35	142.00
IUUC-Mtr-058754	Medicago truncatula	35.61	5.00e-68	250.00
IUUC-Mla-058881	Melampsora laricipopulina	33.44	4.00e-49	187.00
IUUC-Mga-059776	Meleagris gallopavo	40.20	4.00e-56	210.00
IUUC-Mvi-060208	Microbotryum violaceum	37.85	7.00e-53	200.00
IUUC-Mmr-061783	Microcebus murinus	40.52	9.00e-56	209.00
IUUC-Mdo-062856	Monodelphis domestica	40.85	6.00e-56	210.00
IUUC-Mmu-064218	Mus musculus	40.52	1.00e-55	209.00
IUUC-Mac-064886	Musa acuminata	46.79	1.00e-47	182.00
IUUC-Mpu-065735	Mustela putorius furo	38.94	1.00e-55	209.00
IUUC-Mlu-067544	Myotis lucifugus	38.82	1.00e-54	205.00
IUUC-Nfi-068502	Neosartorya fischeri	34.50	3.00e-46	178.00
IUUC-Ncr-068891	Neurospora crassa	27.91	2.00e-35	142.00
IUUC-Nle-069389	Nomascus leucogenys	40.52	9.00e-56	209.00
IUUC-Opr-071042	Ochotona princeps	48.42	6.00e-45	174.00
IUUC-Ont-071455	Oreochromis niloticus	39.22	1.00e-56	213.00
IUUC-Oan-073181	Ornithorhynchus anatinus	38.32	2.00e-55	208.00
IUUC-Ocu-073758	Oryctolagus cuniculus	38.94	7.00e-56	210.00
IUUC-Oba-075739	Oryza barthii	40.48	1.00e-60	226.00
IUUC-Obr-076111	Oryza brachyantha	41.07	3.00e-71	261.00
IUUC-Ogl-077914	Oryza glaberrima	40.35	2.00e-65	241.00
IUUC-Ogu-078190	Oryza glumaepatula	37.82	6.00e-55	206.00
IUUC-Oin-079473	Oryza indica	41.96	2.00e-67	248.00
IUUC-Olo-080645	Oryza longistaminata	48.07	9.00e-49	186.00
IUUC-Ome-081831	Oryza meridionalis	46.73	5.00e-48	183.00
IUUC-Oni-082431	Oryza nivara	37.82	3.00e-55	207.00
IUUC-Opu-083325	Oryza punctata	32.02	3.00e-52	197.00
IUUC-Oru-085154	Oryza rufipogon	37.82	6.00e-55	206.00
IUUC-Osa-086189	Oryza sativa	41.96	2.00e-67	248.00
IUUC-Ola-086574	Oryzias latipes	38.32	2.00e-56	212.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.30	1.00e-53	202.00
IUUC-Oga-088827	Otolemur garnettii	38.94	2.00e-55	209.00
IUUC-Oar-089648	Ovis aries	38.94	1.00e-55	209.00
IUUC-Ptr-091195	Pan troglodytes	40.52	8.00e-56	210.00
IUUC-Pan-091978	Papio anubis	40.52	8.00e-56	210.00
IUUC-Psi-093598	Pelodiscus sinensis	38.63	4.00e-56	210.00
IUUC-Pma-094593	Petromyzon marinus	43.82	3.00e-34	138.00
IUUC-Pno-094823	Phaeosphaeria nodorum	34.82	7.00e-43	166.00
IUUC-Ppa-095455	Physcomitrella patens	41.39	2.00e-63	235.00
IUUC-Pfo-097120	Poecilia formosa	40.07	8.00e-55	206.00
IUUC-Pab-098771	Pongo abelii	40.52	9.00e-56	209.00
IUUC-Pop-099542	Populus trichocarpa	41.64	1.00e-69	256.00
IUUC-Pca-100727	Procavia capensis	31.23	4.00e-39	154.00
IUUC-Ppe-101686	Prunus persica	40.18	1.00e-63	235.00
IUUC-Pva-103211	Pteropus vampyrus	32.14	4.00e-40	157.00
IUUC-Pgr-103603	Puccinia graminis	34.19	6.00e-45	174.00
IUUC-Ptt-103995	Puccinia triticina	32.15	4.00e-40	158.00
IUUC-Pte-104359	Pyrenophora teres	31.54	3.00e-42	164.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	34.50	3.00e-42	164.00
IUUC-Rno-105064	Rattus norvegicus	40.52	1.00e-55	209.00
IUUC-Sce-106186	Saccharomyces cerevisiae	36.96	1.00e-52	199.00
IUUC-Sha-106582	Sarcophilus harrisii	39.25	3.00e-56	211.00
IUUC-Sja-107949	Schizosaccharomyces japonicus	37.38	4.00e-48	184.00
IUUC-Spo-108142	Schizosaccharomyces pombe	35.08	6.00e-50	190.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	33.55	1.00e-44	172.00
IUUC-Smo-109111	Selaginella moellendorffii	39.58	1.00e-67	249.00
IUUC-Sit-109804	Setaria italica	36.66	3.00e-65	241.00
IUUC-Sly-111693	Solanum lycopersicum	40.46	2.00e-61	228.00
IUUC-Sar-113381	Sorex araneus	31.04	8.00e-40	156.00
IUUC-Sbi-114849	Sorghum bicolor	41.37	3.00e-66	244.00
IUUC-Sre-114945	Sporisorium reilianum	34.20	1.00e-44	173.00
IUUC-Ssc-115582	Sus scrofa	38.82	2.00e-54	205.00
IUUC-Tgu-116899	Taeniopygia guttata	39.87	3.00e-56	211.00
IUUC-Tru-118011	Takifugu rubripes	39.22	2.00e-55	209.00
IUUC-Tni-120598	Tetraodon nigroviridis	38.01	5.00e-56	211.00
IUUC-Tca-121247	Theobroma cacao	35.68	6.00e-70	256.00
IUUC-Tre-121949	Trichoderma reesei	31.61	2.00e-40	158.00
IUUC-Tvi-122626	Trichoderma virens	31.79	3.00e-40	158.00
IUUC-Tae-123335	Triticum aestivum	42.56	2.00e-66	244.00
IUUC-Tur-126005	Triticum urartu	39.88	2.00e-59	221.00
IUUC-Tme-126904	Tuber melanosporum	33.23	2.00e-44	171.00
IUUC-Tbe-127254	Tupaia belangeri	34.31	5.00e-38	150.00
IUUC-Ttr-128544	Tursiops truncatus	40.20	3.00e-55	207.00
IUUC-Uma-129379	Ustilago maydis	37.20	3.00e-47	182.00
IUUC-Vda-129761	Verticillium dahliae	39.58	4.00e-39	154.00
IUUC-Vpa-130485	Vicugna pacos	40.52	1.00e-55	209.00
IUUC-Vvi-131171	Vitis vinifera	40.18	3.00e-70	258.00
IUUC-Xtr-132241	Xenopus tropicalis	30.33	1.00e-37	149.00
IUUC-Xma-133583	Xiphophorus maculatus	39.74	2.00e-54	205.00
IUUC-Yli-134446	Yarrowia lipolytica	37.86	2.00e-50	191.00
IUUC-Zma-135722	Zea mays	41.67	3.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence