iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Mmu-063128

Ensembl Protein ID

ENSMUSP00000137446.1

UniProt Accession

J3QPR6; J3QPR6_MOUSE

Genbank Protein ID

EDL04905.1

Protein Name

MCG1377; Ret finger protein-like 4B

Genbank Nucleotide ID

AC153539

Gene Name

Rfpl4b; mCG_1377

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000094311.1	ENSMUST00000179279.1	ENSMUSP00000137446.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	GXD
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.9	31	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ +++ p+ l+C H+ ++dC +kw+ +k  +    +CP+Cr
   Q: 31   CAICLDIYSH-PIYLSCAHILCFDCGKKWMTKK--EDLIMTCPVCR 73
           **********.999***************5555..666669****8 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MRKENLDSKH HYVKVSQDNL MENILEMEAT CAICLDIYSH PIYLSCAHIL CFDCGKKWMT 60
KKEDLIMTCP VCRKEQKRPV KYDGVMKELA ILLKQHGPLL KQHKGQITGL LRLVSENTAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTACTTCA ACCAAGAGCT TGAGCAAGTA AATACAGAAG CACAAGTGGT CAGATCCTAA 60
GTCCTTTGCT GGAGACCACC AACTCTAGGT AAACTGATAC TTCTGTGTGT CTGTCTTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013320--ConA-like_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mmu:215919

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ggo-044763	Gorilla gorilla	36.28	3.00e-30	125.00
IUUC-Hsa-046241	Homo sapiens	36.73	1.00e-30	126.00
IUUC-Itr-047901	Ictidomys tridecemlineatus	41.73	2.00e-44	172.00
IUUC-Laf-054355	Loxodonta africana	39.57	5.00e-37	147.00
IUUC-Mlu-067985	Myotis lucifugus	39.29	3.00e-35	142.00
IUUC-Oga-089091	Otolemur garnettii	38.77	1.00e-36	146.00
IUUC-Rno-105863	Rattus norvegicus	68.46	1.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence