iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Eca-033677

UUCD1 version

UUC-EqC-00463

Ensembl Protein ID

ENSECAP00000014433.1

UniProt Accession

F6XI32; F6XI32_HORSE

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000016440.1	ENSECAT00000017750.1	ENSECAP00000014433.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-17	61.8	360	398

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d v+cl+  ++   l+sGsdDg++++W++ t ++ +
   Q: 360  GHGDLVRCLSVsPGgQWLASGSDDGSVRLWEVATARCMR 398
           8**********988899******************9987 PP

Organism

Equus caballus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

DSGLSDREES VFSGLEDSGS DSSADTTAEE ENGASGDENH SGMEKTTGQQ VRWAPWCKAT 60
EEMRVQGGDE YAEDSSDEED VRNTVGNVPL EWYDDFPHVG YDLDGKRIYK PIRTRDELDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTCCGGCC TCTCTGACCG CGAGGAGAGT GTGTTCTCAG GCCTGGAAGA TTCTGGCAGT 60
GACAGTAGTG CAGACACCAC TGCCGAGGAA GAGAATGGAG CCAGCGGTGA TGAGAACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.72	3.00e-124	439.00
IUUC-Aml-001507	Ailuropoda melanoleuca	85.61	0.00e+00	1095.00
IUUC-Atr-003141	Amborella trichopoda	42.06	1.00e-88	320.00
IUUC-Apl-003545	Anas platyrhynchos	68.23	0.00e+00	806.00
IUUC-Aly-005649	Arabidopsis lyrata	45.04	5.00e-156	545.00
IUUC-Ath-007625	Arabidopsis thaliana	45.37	5.00e-154	538.00
IUUC-Ago-007958	Ashbya gossypii	43.40	2.00e-160	559.00
IUUC-Acl-008344	Aspergillus clavatus	44.02	7.00e-142	498.00
IUUC-Afl-008616	Aspergillus flavus	42.07	2.00e-143	503.00
IUUC-Afu-009083	Aspergillus fumigatus	44.65	8.00e-140	491.00
IUUC-Ani-009365	Aspergillus nidulans	42.96	1.00e-144	506.00
IUUC-Ang-009796	Aspergillus niger	43.73	5.00e-140	491.00
IUUC-Aor-010015	Aspergillus oryzae	42.07	2.00e-143	503.00
IUUC-Ate-010537	Aspergillus terreus	43.18	5.00e-146	511.00
IUUC-Ame-011767	Astyanax mexicanus	68.42	1.00e-111	395.00
IUUC-Bgr-012286	Blumeria graminis	42.99	2.00e-148	519.00
IUUC-Bta-013569	Bos taurus	89.05	0.00e+00	1151.00
IUUC-Bci-013820	Botrytis cinerea	42.55	2.00e-141	496.00
IUUC-Bdi-014895	Brachypodium distachyon	45.50	1.00e-153	536.00
IUUC-Bol-016099	Brassica oleracea	45.06	4.00e-156	545.00
IUUC-Bra-017174	Brassica rapa	44.89	3.00e-156	546.00
IUUC-Cel-018201	Caenorhabditis elegans	47.03	8.00e-155	540.00
IUUC-Cja-019009	Callithrix jacchus	76.41	0.00e+00	951.00
IUUC-Cfa-020173	Canis familiaris	86.04	0.00e+00	1077.00
IUUC-Cpo-021796	Cavia porcellus	87.44	0.00e+00	1094.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	48.75	9.00e-155	540.00
IUUC-Csa-023440	Chlorocebus sabaeus	89.79	0.00e+00	1160.00
IUUC-Cin-025782	Ciona intestinalis	55.15	0.00e+00	744.00
IUUC-Csv-026352	Ciona savignyi	56.49	0.00e+00	743.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.16	3.00e-114	405.00
IUUC-Cne-027004	Cryptococcus neoformans	43.33	7.00e-169	587.00
IUUC-Cme-027242	Cyanidioschyzon merolae	39.53	1.00e-121	430.00
IUUC-Dre-028658	Danio rerio	73.25	0.00e+00	990.00
IUUC-Dno-028883	Dasypus novemcinctus	84.14	0.00e+00	1116.00
IUUC-Dor-031031	Dipodomys ordii	87.92	0.00e+00	1160.00
IUUC-Dse-031443	Dothistroma septosporum	41.11	1.00e-142	500.00
IUUC-Dme-031786	Drosophila melanogaster	52.89	0.00e+00	723.00
IUUC-Eeu-035310	Erinaceus europaeus	89.18	0.00e+00	940.00
IUUC-Fca-035888	Felis catus	89.32	0.00e+00	1112.00
IUUC-Fal-037438	Ficedula albicollis	68.86	0.00e+00	747.00
IUUC-Fox-037973	Fusarium oxysporum	44.34	1.00e-157	550.00
IUUC-Fso-038187	Fusarium solani	44.19	1.00e-156	546.00
IUUC-Gmo-039114	Gadus morhua	65.48	0.00e+00	833.00
IUUC-Ggr-039746	Gaeumannomyces graminis	42.66	7.00e-152	530.00
IUUC-Gga-040631	Gallus gallus	73.16	6.00e-155	540.00
IUUC-Gac-042582	Gasterosteus aculeatus	66.18	0.00e+00	900.00
IUUC-Gma-044215	Glycine max	44.26	1.00e-153	536.00
IUUC-Ggo-045587	Gorilla gorilla	92.71	0.00e+00	1157.00
IUUC-Hsa-046319	Homo sapiens	90.70	0.00e+00	1174.00
IUUC-Hvu-047526	Hordeum vulgare	45.18	3.00e-146	512.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	90.45	0.00e+00	1127.00
IUUC-Kpa-049221	Komagataella pastoris	41.80	5.00e-152	531.00
IUUC-Lch-049640	Latimeria chalumnae	74.00	0.00e+00	1011.00
IUUC-Lpe-051135	Leersia perrieri	43.04	2.00e-135	476.00
IUUC-Loc-051930	Lepisosteus oculatus	72.73	0.00e+00	976.00
IUUC-Lma-053290	Leptosphaeria maculans	43.41	1.00e-141	496.00
IUUC-Laf-053903	Loxodonta africana	78.92	0.00e+00	1000.00
IUUC-Mcc-055471	Macaca mulatta	89.43	0.00e+00	1167.00
IUUC-Meu-056190	Macropus eugenii	84.74	0.00e+00	1053.00
IUUC-Mor-057135	Magnaporthe oryzae	42.11	6.00e-143	501.00
IUUC-Mpo-057475	Magnaporthe poae	42.19	8.00e-141	494.00
IUUC-Mtr-058689	Medicago truncatula	41.43	1.00e-135	477.00
IUUC-Mla-059149	Melampsora laricipopulina	45.92	3.00e-171	595.00
IUUC-Mga-059645	Meleagris gallopavo	63.52	2.00e-97	348.00
IUUC-Mvi-060485	Microbotryum violaceum	45.64	1.00e-148	521.00
IUUC-Mmr-061674	Microcebus murinus	83.31	0.00e+00	1105.00
IUUC-Mdo-062973	Monodelphis domestica	83.74	0.00e+00	1073.00
IUUC-Mmu-064180	Mus musculus	85.84	0.00e+00	1148.00
IUUC-Mac-064535	Musa acuminata	41.72	7.00e-98	351.00
IUUC-Mpu-066406	Mustela putorius furo	90.02	0.00e+00	1152.00
IUUC-Mlu-067795	Myotis lucifugus	91.99	0.00e+00	1127.00
IUUC-Nfi-068516	Neosartorya fischeri	42.76	9.00e-134	470.00
IUUC-Ncr-068767	Neurospora crassa	43.21	1.00e-138	487.00
IUUC-Opr-071084	Ochotona princeps	88.21	2.00e-146	511.00
IUUC-Ont-071614	Oreochromis niloticus	69.14	0.00e+00	917.00
IUUC-Oan-073532	Ornithorhynchus anatinus	44.00	8.00e-10	55.10
IUUC-Oba-075980	Oryza barthii	43.37	2.00e-135	475.00
IUUC-Obr-076799	Oryza brachyantha	45.40	1.00e-148	520.00
IUUC-Ogl-077134	Oryza glaberrima	44.59	6.00e-143	501.00
IUUC-Ogu-078655	Oryza glumaepatula	42.99	6.00e-138	484.00
IUUC-Oin-079654	Oryza indica	44.59	1.00e-142	499.00
IUUC-Olo-080706	Oryza longistaminata	43.04	5.00e-136	478.00
IUUC-Ome-081716	Oryza meridionalis	39.22	3.00e-116	412.00
IUUC-Oni-082508	Oryza nivara	43.11	3.00e-135	475.00
IUUC-Opu-083707	Oryza punctata	43.04	3.00e-135	475.00
IUUC-Oru-084453	Oryza rufipogon	43.04	5.00e-136	478.00
IUUC-Osa-085811	Oryza sativa	44.59	6.00e-143	501.00
IUUC-Ola-087361	Oryzias latipes	70.05	0.00e+00	949.00
IUUC-Oga-088015	Otolemur garnettii	86.19	0.00e+00	1152.00
IUUC-Oar-090058	Ovis aries	60.49	1.00e-109	390.00
IUUC-Ptr-090631	Pan troglodytes	83.66	1.00e-143	502.00
IUUC-Pan-092306	Papio anubis	88.27	0.00e+00	1168.00
IUUC-Pma-094622	Petromyzon marinus	71.96	0.00e+00	966.00
IUUC-Pno-094794	Phaeosphaeria nodorum	38.98	6.00e-129	454.00
IUUC-Ppa-095528	Physcomitrella patens	44.00	3.00e-98	352.00
IUUC-Pfo-096682	Poecilia formosa	70.05	0.00e+00	949.00
IUUC-Pab-097939	Pongo abelii	91.65	0.00e+00	1033.00
IUUC-Pop-099043	Populus trichocarpa	45.95	2.00e-141	495.00
IUUC-Pca-100333	Procavia capensis	84.51	0.00e+00	1113.00
IUUC-Ppe-102078	Prunus persica	44.44	2.00e-150	526.00
IUUC-Pgr-103525	Puccinia graminis	47.26	5.00e-165	574.00
IUUC-Ptt-103929	Puccinia triticina	47.22	2.00e-160	560.00
IUUC-Pte-104029	Pyrenophora teres	42.02	2.00e-148	520.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.33	3.00e-149	522.00
IUUC-Rno-105248	Rattus norvegicus	87.14	0.00e+00	1125.00
IUUC-Sce-106381	Saccharomyces cerevisiae	41.77	8.00e-155	540.00
IUUC-Sha-106519	Sarcophilus harrisii	84.27	0.00e+00	1083.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	42.18	2.00e-140	493.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.99	1.00e-137	483.00
IUUC-Smo-109604	Selaginella moellendorffii	46.73	7.00e-156	544.00
IUUC-Sit-110551	Setaria italica	44.75	1.00e-146	513.00
IUUC-Sly-110970	Solanum lycopersicum	46.97	1.00e-82	300.00
IUUC-Stu-112593	Solanum tuberosum	45.89	8.00e-154	537.00
IUUC-Sar-113123	Sorex araneus	86.35	9.00e-149	519.00
IUUC-Sbi-113945	Sorghum bicolor	44.00	7.00e-149	520.00
IUUC-Sre-115188	Sporisorium reilianum	45.78	8.00e-162	564.00
IUUC-Ssc-115352	Sus scrofa	92.22	0.00e+00	1113.00
IUUC-Tru-117685	Takifugu rubripes	69.97	0.00e+00	937.00
IUUC-Tni-119982	Tetraodon nigroviridis	70.26	0.00e+00	896.00
IUUC-Tca-121664	Theobroma cacao	45.25	1.00e-160	560.00
IUUC-Tre-122229	Trichoderma reesei	43.97	1.00e-138	487.00
IUUC-Tvi-122576	Trichoderma virens	43.96	1.00e-142	500.00
IUUC-Tae-124110	Triticum aestivum	44.50	2.00e-136	479.00
IUUC-Tur-126781	Triticum urartu	41.79	3.00e-120	426.00
IUUC-Tme-127080	Tuber melanosporum	47.24	1.00e-172	599.00
IUUC-Tbe-127452	Tupaia belangeri	46.67	3.00e-10	59.30
IUUC-Ttr-128514	Tursiops truncatus	88.89	0.00e+00	821.00
IUUC-Uma-129556	Ustilago maydis	43.98	3.00e-154	539.00
IUUC-Vda-129715	Verticillium dahliae	44.27	6.00e-152	531.00
IUUC-Vvi-131211	Vitis vinifera	45.75	2.00e-151	529.00
IUUC-Xma-133883	Xiphophorus maculatus	70.27	0.00e+00	915.00
IUUC-Yli-134438	Yarrowia lipolytica	42.77	2.00e-141	496.00
IUUC-Zma-135341	Zea mays	39.82	5.00e-134	471.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence