iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129891

Ensembl Protein ID

EGY14452

UniProt Accession

G2X5W1; G2X5W1_VERDV

Genbank Protein ID

EGY14452.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

DS572704

Gene Name

VDAG_05616

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_05616	EGY14452	EGY14452

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-37	124.5	147	181
UBD/Beta-Prp	1.30e-52	177.9	57	263

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH++ +++++     d  l+sGsdDg+i +WD+rt
   Q: 147  GHEEVINAMDIsrrGDEVLISGSDDGSIGLWDPRT 181
           89*********9965599**************998 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           + +lsgh++ev a kf+p+g+++++gs Dr i +w  + +++   +lkgh+  vl+l++s+++  l s+s+d  +  wdl++g+ ++    gh++v+n + 
   Q: 57   VMELSGHSGEVFAAKFDPTGNFIASGSMDRSILLWrTYGDCENYGILKGHSGAVLDLQWSRDSRILFSASADMHLASWDLDNGTRIR-RYVGHEEVINAMD 156
           5689*******************************9999************************************************.9************ PP
   S: 145  vhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           ++  g  +l+sGs+D+ + lWd +t+   +  +   + +v+ +++++ g+e+ sg+ d+++k+wdl+++ +v+++ gh+d+++s+r+sp+++ l+s ++D 
   Q: 157  ISRRGdEVLISGSDDGSIGLWDPRTKHAADYIQT--DFPVTAVAISEAGNEIYSGGIDNDIKVWDLRKKAVVYSMLGHQDTITSLRVSPDSQSLLSYAMDS 255
           *****************************99986..99*************************************************************** PP
   S: 245  siriWdlr 252
           + r Wd+r
   Q: 256  TARTWDIR 263
           ******97 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSAEKRPASD EPGPGQALVK RQNVGTSSRA LARLNASGNG SALVKTAPRT SGLQAPVMEL 60
SGHSGEVFAA KFDPTGNFIA SGSMDRSILL WRTYGDCENY GILKGHSGAV LDLQWSRDSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGGTTTCG GTTTAGGACC GAATACCCCA AGTTCTGCAT TTCGTACCTT CCAACGCGCG 60
CGCTGTATCA ACAGTTCCCT GTCGGCACAC CCCAAGCGTC CGACTGTCCA CGAGCCCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071014--C:post-mRNA release spliceosomal complex
GO:0005682--C:U5 snRNP

KEGG

vda:VDAG_05616

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	44.95	5.00e-84	302.00
IUUC-Aml-001428	Ailuropoda melanoleuca	49.83	1.00e-84	304.00
IUUC-Atr-003164	Amborella trichopoda	45.13	1.00e-84	304.00
IUUC-Apl-003447	Anas platyrhynchos	48.96	3.00e-80	290.00
IUUC-Aca-004270	Anolis carolinensis	47.10	1.00e-84	305.00
IUUC-Aly-005659	Arabidopsis lyrata	47.23	1.00e-87	314.00
IUUC-Ath-006764	Arabidopsis thaliana	46.91	8.00e-87	311.00
IUUC-Acl-008324	Aspergillus clavatus	66.67	1.00e-143	500.00
IUUC-Afl-008607	Aspergillus flavus	70.13	1.00e-130	457.00
IUUC-Afu-008998	Aspergillus fumigatus	66.95	4.00e-145	505.00
IUUC-Ani-009363	Aspergillus nidulans	66.11	7.00e-145	504.00
IUUC-Ang-009513	Aspergillus niger	62.47	2.00e-126	443.00
IUUC-Aor-010237	Aspergillus oryzae	65.92	5.00e-143	498.00
IUUC-Ate-010374	Aspergillus terreus	61.84	1.00e-127	447.00
IUUC-Ame-010728	Astyanax mexicanus	47.66	2.00e-88	317.00
IUUC-Bgr-012297	Blumeria graminis	69.96	1.00e-112	397.00
IUUC-Bta-012433	Bos taurus	49.68	2.00e-89	320.00
IUUC-Bci-013763	Botrytis cinerea	76.12	1.00e-167	580.00
IUUC-Bdi-014490	Brachypodium distachyon	44.95	2.00e-84	303.00
IUUC-Bol-016479	Brassica oleracea	44.00	3.00e-87	312.00
IUUC-Bra-017219	Brassica rapa	41.87	3.00e-87	313.00
IUUC-Cel-018512	Caenorhabditis elegans	42.77	8.00e-82	295.00
IUUC-Cja-019308	Callithrix jacchus	49.51	5.00e-90	322.00
IUUC-Cfa-020998	Canis familiaris	49.84	3.00e-90	323.00
IUUC-Cpo-021580	Cavia porcellus	49.68	2.00e-89	320.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	48.72	7.00e-86	308.00
IUUC-Csa-023456	Chlorocebus sabaeus	49.51	5.00e-90	322.00
IUUC-Cho-024644	Choloepus hoffmanni	49.84	3.00e-90	322.00
IUUC-Cin-025463	Ciona intestinalis	44.48	2.00e-82	297.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	83.90	0.00e+00	641.00
IUUC-Cne-026780	Cryptococcus neoformans	43.94	6.00e-79	285.00
IUUC-Dre-027671	Danio rerio	49.19	2.00e-92	330.00
IUUC-Dno-029769	Dasypus novemcinctus	49.84	3.00e-90	323.00
IUUC-Dor-030776	Dipodomys ordii	51.97	1.00e-38	151.00
IUUC-Dse-031316	Dothistroma septosporum	60.11	4.00e-123	432.00
IUUC-Dme-031756	Drosophila melanogaster	46.58	2.00e-90	323.00
IUUC-Ete-032753	Echinops telfairi	46.43	6.00e-76	275.00
IUUC-Eca-033979	Equus caballus	49.68	2.00e-89	320.00
IUUC-Eeu-034862	Erinaceus europaeus	48.57	1.00e-34	138.00
IUUC-Fca-036110	Felis catus	50.58	1.00e-75	274.00
IUUC-Fal-037648	Ficedula albicollis	50.49	2.00e-90	323.00
IUUC-Fox-037861	Fusarium oxysporum	78.09	2.00e-168	583.00
IUUC-Fso-038405	Fusarium solani	79.78	1.00e-170	590.00
IUUC-Gmo-039383	Gadus morhua	46.81	4.00e-88	316.00
IUUC-Ggr-040082	Gaeumannomyces graminis	73.88	5.00e-154	535.00
IUUC-Gga-040785	Gallus gallus	50.49	3.00e-90	323.00
IUUC-Gac-041645	Gasterosteus aculeatus	48.22	3.00e-87	313.00
IUUC-Gma-043672	Glycine max	44.95	4.00e-84	303.00
IUUC-Ggo-044800	Gorilla gorilla	43.20	9.00e-67	245.00
IUUC-Hsa-045918	Homo sapiens	49.51	5.00e-90	322.00
IUUC-Hvu-047342	Hordeum vulgare	44.63	2.00e-83	300.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	50.89	2.00e-50	189.00
IUUC-Kpa-049149	Komagataella pastoris	35.69	2.00e-43	167.00
IUUC-Lch-050395	Latimeria chalumnae	48.25	7.00e-95	338.00
IUUC-Lpe-051275	Leersia perrieri	45.28	3.00e-84	303.00
IUUC-Loc-052666	Lepisosteus oculatus	47.11	2.00e-87	313.00
IUUC-Lma-053129	Leptosphaeria maculans	63.79	3.00e-135	473.00
IUUC-Laf-054512	Loxodonta africana	49.68	2.00e-89	320.00
IUUC-Mcc-055819	Macaca mulatta	49.51	1.00e-89	321.00
IUUC-Meu-056350	Macropus eugenii	43.83	2.00e-71	261.00
IUUC-Mor-057063	Magnaporthe oryzae	76.97	3.00e-167	578.00
IUUC-Mpo-057369	Magnaporthe poae	73.03	6.00e-152	528.00
IUUC-Mtr-058228	Medicago truncatula	45.60	1.00e-84	304.00
IUUC-Mla-059093	Melampsora laricipopulina	42.47	3.00e-75	273.00
IUUC-Mga-059719	Meleagris gallopavo	50.00	1.00e-90	324.00
IUUC-Mvi-060285	Microbotryum violaceum	41.72	2.00e-69	254.00
IUUC-Mmr-061685	Microcebus murinus	47.57	1.00e-81	294.00
IUUC-Mdo-062121	Monodelphis domestica	50.00	3.00e-89	319.00
IUUC-Mmu-063216	Mus musculus	49.84	3.00e-90	323.00
IUUC-Mac-065463	Musa acuminata	42.02	3.00e-76	276.00
IUUC-Mpu-066390	Mustela putorius furo	49.84	3.00e-90	323.00
IUUC-Mlu-067686	Myotis lucifugus	47.32	5.00e-86	309.00
IUUC-Nfi-068509	Neosartorya fischeri	66.39	5.00e-145	504.00
IUUC-Ncr-068870	Neurospora crassa	78.65	2.00e-173	599.00
IUUC-Nle-069539	Nomascus leucogenys	49.51	6.00e-90	322.00
IUUC-Opr-070555	Ochotona princeps	43.18	5.00e-76	275.00
IUUC-Ont-071490	Oreochromis niloticus	48.92	2.00e-88	317.00
IUUC-Oan-073044	Ornithorhynchus anatinus	44.23	3.00e-68	250.00
IUUC-Ocu-073764	Oryctolagus cuniculus	49.84	3.00e-90	323.00
IUUC-Oba-075704	Oryza barthii	44.63	1.00e-83	301.00
IUUC-Obr-076455	Oryza brachyantha	44.95	1.00e-83	301.00
IUUC-Ogl-077382	Oryza glaberrima	44.95	4.00e-84	302.00
IUUC-Ogu-078739	Oryza glumaepatula	44.63	1.00e-83	301.00
IUUC-Oin-079072	Oryza indica	44.63	1.00e-83	301.00
IUUC-Olo-080809	Oryza longistaminata	44.63	1.00e-83	301.00
IUUC-Ome-081677	Oryza meridionalis	44.63	8.00e-84	301.00
IUUC-Oni-082937	Oryza nivara	44.63	1.00e-83	301.00
IUUC-Opu-083510	Oryza punctata	44.63	1.00e-83	301.00
IUUC-Oru-084360	Oryza rufipogon	44.63	2.00e-83	301.00
IUUC-Osa-085640	Oryza sativa	44.63	1.00e-83	301.00
IUUC-Ola-086504	Oryzias latipes	49.04	7.00e-89	318.00
IUUC-Olu-087869	Ostreococcus lucimarinus	36.67	2.00e-49	187.00
IUUC-Oga-088773	Otolemur garnettii	49.84	2.00e-90	323.00
IUUC-Oar-089677	Ovis aries	49.20	8.00e-88	315.00
IUUC-Ptr-090724	Pan troglodytes	49.66	1.00e-84	305.00
IUUC-Pan-092683	Papio anubis	49.51	5.00e-90	322.00
IUUC-Psi-093415	Pelodiscus sinensis	50.00	6.00e-89	318.00
IUUC-Pma-094562	Petromyzon marinus	45.10	4.00e-92	329.00
IUUC-Pno-095014	Phaeosphaeria nodorum	66.09	2.00e-138	483.00
IUUC-Ppa-095822	Physcomitrella patens	46.36	1.00e-86	311.00
IUUC-Pfo-096579	Poecilia formosa	49.19	2.00e-88	317.00
IUUC-Pab-098313	Pongo abelii	49.51	5.00e-90	322.00
IUUC-Pop-099747	Populus trichocarpa	44.95	3.00e-84	303.00
IUUC-Pca-100871	Procavia capensis	41.28	6.00e-61	225.00
IUUC-Ppe-101389	Prunus persica	43.65	2.00e-82	296.00
IUUC-Pva-102468	Pteropus vampyrus	41.56	2.00e-66	243.00
IUUC-Pgr-103523	Puccinia graminis	42.03	8.00e-79	285.00
IUUC-Ptt-103930	Puccinia triticina	43.13	4.00e-79	286.00
IUUC-Pte-104299	Pyrenophora teres	64.62	3.00e-139	486.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	65.18	9.00e-140	488.00
IUUC-Rno-105796	Rattus norvegicus	49.84	8.00e-90	322.00
IUUC-Sha-107191	Sarcophilus harrisii	50.00	3.00e-89	319.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	41.47	4.00e-73	266.00
IUUC-Spo-108249	Schizosaccharomyces pombe	45.45	1.00e-89	320.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	76.12	2.00e-167	579.00
IUUC-Sit-110805	Setaria italica	43.65	1.00e-82	298.00
IUUC-Sly-111567	Solanum lycopersicum	46.75	5.00e-87	312.00
IUUC-Stu-112562	Solanum tuberosum	46.75	1.00e-87	314.00
IUUC-Sar-112991	Sorex araneus	46.36	1.00e-55	207.00
IUUC-Sbi-114010	Sorghum bicolor	43.65	1.00e-82	298.00
IUUC-Sre-114947	Sporisorium reilianum	40.43	8.00e-75	271.00
IUUC-Ssc-115371	Sus scrofa	49.68	2.00e-89	320.00
IUUC-Tgu-117429	Taeniopygia guttata	49.03	4.00e-86	309.00
IUUC-Tru-118081	Takifugu rubripes	49.21	2.00e-90	323.00
IUUC-Tsy-119101	Tarsius syrichta	43.37	2.00e-73	267.00
IUUC-Tni-120532	Tetraodon nigroviridis	49.19	4.00e-89	319.00
IUUC-Tca-121373	Theobroma cacao	44.95	7.00e-84	301.00
IUUC-Tre-122050	Trichoderma reesei	78.27	3.00e-168	582.00
IUUC-Tvi-122394	Trichoderma virens	77.94	5.00e-160	555.00
IUUC-Tae-124661	Triticum aestivum	44.48	6.00e-82	295.00
IUUC-Tme-126998	Tuber melanosporum	68.79	9.00e-127	444.00
IUUC-Tbe-128032	Tupaia belangeri	49.84	3.00e-90	323.00
IUUC-Ttr-129102	Tursiops truncatus	50.39	3.00e-74	270.00
IUUC-Uma-129363	Ustilago maydis	43.47	7.00e-81	292.00
IUUC-Vpa-130827	Vicugna pacos	49.35	4.00e-89	319.00
IUUC-Vvi-131202	Vitis vinifera	45.93	8.00e-86	308.00
IUUC-Xtr-132769	Xenopus tropicalis	48.20	3.00e-85	306.00
IUUC-Xma-133147	Xiphophorus maculatus	48.87	5.00e-88	315.00
IUUC-Yli-134352	Yarrowia lipolytica	34.75	6.00e-41	159.00
IUUC-Zma-135164	Zea mays	43.97	5.00e-83	299.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence