iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050365

Ensembl Protein ID

ENSLACP00000011526.1

UniProt Accession

H3APF5; H3APF5_LATCH

Genbank Protein ID

ENSLACP00000011526

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01093231

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010142.1	ENSLACT00000011614.1	ENSLACP00000011526.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-08	33.3	124	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH ++v+++++ +d  ++vsGs D+t  +WD+ +++++
   Q: 124  GHIEDVFDICWtTDgSYMVSGSVDNTAIMWDVNKDKSI 161
           899*********8889***************9888765 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQHNVEGKIN RLASAGVDST VRNVKNMLKG SLVLLVQQKH 60
VSGAFYLKAS LFFSFPDSGQ IGQTLTIGLR ALHPQHILGC QPVQSTTQNP YNNNVFKKIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTCA TCACGTGTGA AATAGCCTGG CATAACAAGG AACCCGTCTA CAGTTTAGAC 60
TTCCAGCACA ACGTAGAAGG GAAAATTAAT CGCTTGGCTT CAGCGGGAGT GGACAGCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR002469--Peptidase_S9B_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048568--P:embryonic organ development
GO:0000278--P:mitotic cell cycle
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	34.25	4.00e-54	205.00
IUUC-Aml-001755	Ailuropoda melanoleuca	52.73	8.00e-138	483.00
IUUC-Atr-002674	Amborella trichopoda	31.99	1.00e-60	227.00
IUUC-Apl-003701	Anas platyrhynchos	54.64	2.00e-148	518.00
IUUC-Aca-004692	Anolis carolinensis	55.82	5.00e-150	524.00
IUUC-Aly-006286	Arabidopsis lyrata	34.33	9.00e-58	217.00
IUUC-Ath-007683	Arabidopsis thaliana	34.58	4.00e-58	218.00
IUUC-Ago-007940	Ashbya gossypii	28.67	1.00e-35	144.00
IUUC-Acl-008070	Aspergillus clavatus	34.14	4.00e-34	139.00
IUUC-Afl-008414	Aspergillus flavus	34.62	2.00e-33	137.00
IUUC-Afu-009046	Aspergillus fumigatus	33.18	4.00e-26	112.00
IUUC-Ani-009399	Aspergillus nidulans	36.46	4.00e-30	126.00
IUUC-Ang-009650	Aspergillus niger	34.91	2.00e-33	137.00
IUUC-Aor-009937	Aspergillus oryzae	34.62	2.00e-33	137.00
IUUC-Ate-010505	Aspergillus terreus	31.03	2.00e-23	103.00
IUUC-Ame-011094	Astyanax mexicanus	48.12	3.00e-124	438.00
IUUC-Bgr-012005	Blumeria graminis	37.60	2.00e-36	147.00
IUUC-Bta-013423	Bos taurus	53.14	2.00e-143	502.00
IUUC-Bdi-014860	Brachypodium distachyon	33.82	2.00e-54	206.00
IUUC-Bol-016603	Brassica oleracea	33.97	3.00e-57	216.00
IUUC-Bra-017175	Brassica rapa	32.59	1.00e-52	200.00
IUUC-Cel-018272	Caenorhabditis elegans	26.32	3.00e-32	132.00
IUUC-Cja-019558	Callithrix jacchus	53.62	2.00e-140	492.00
IUUC-Cfa-020900	Canis familiaris	51.94	1.00e-136	479.00
IUUC-Cpo-022054	Cavia porcellus	47.75	1.00e-114	406.00
IUUC-Csa-023850	Chlorocebus sabaeus	54.33	4.00e-149	521.00
IUUC-Cho-024510	Choloepus hoffmanni	48.64	3.00e-69	255.00
IUUC-Cin-025178	Ciona intestinalis	37.75	3.00e-68	252.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	35.83	7.00e-30	125.00
IUUC-Cne-027015	Cryptococcus neoformans	36.05	2.00e-33	137.00
IUUC-Cme-027136	Cyanidioschyzon merolae	27.33	2.00e-30	126.00
IUUC-Dre-027879	Danio rerio	49.21	4.00e-131	461.00
IUUC-Dno-029335	Dasypus novemcinctus	53.42	5.00e-146	511.00
IUUC-Dor-030520	Dipodomys ordii	50.10	4.00e-129	454.00
IUUC-Dme-031838	Drosophila melanogaster	36.75	1.00e-68	254.00
IUUC-Eca-033563	Equus caballus	53.74	3.00e-146	511.00
IUUC-Fca-036052	Felis catus	51.86	1.00e-137	483.00
IUUC-Fal-037080	Ficedula albicollis	53.92	4.00e-142	498.00
IUUC-Fox-038022	Fusarium oxysporum	36.41	4.00e-28	119.00
IUUC-Gmo-039461	Gadus morhua	56.69	9.00e-97	346.00
IUUC-Gga-041133	Gallus gallus	56.78	2.00e-149	521.00
IUUC-Gac-041769	Gasterosteus aculeatus	48.92	6.00e-129	454.00
IUUC-Gma-043339	Glycine max	34.58	2.00e-64	240.00
IUUC-Ggo-044561	Gorilla gorilla	53.77	7.00e-146	510.00
IUUC-Hsa-046150	Homo sapiens	53.94	2.00e-146	512.00
IUUC-Hvu-047792	Hordeum vulgare	32.53	5.00e-26	111.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	53.05	4.00e-142	498.00
IUUC-Kpa-049397	Komagataella pastoris	28.11	3.00e-43	168.00
IUUC-Lpe-050875	Leersia perrieri	34.16	1.00e-51	197.00
IUUC-Loc-052770	Lepisosteus oculatus	53.56	3.00e-143	501.00
IUUC-Laf-053505	Loxodonta africana	54.51	8.00e-152	530.00
IUUC-Mcc-054803	Macaca mulatta	54.33	7.00e-149	520.00
IUUC-Meu-056578	Macropus eugenii	47.75	3.00e-121	428.00
IUUC-Mor-057211	Magnaporthe oryzae	37.12	8.00e-29	122.00
IUUC-Mtr-058066	Medicago truncatula	36.09	2.00e-64	239.00
IUUC-Mga-059735	Meleagris gallopavo	56.39	3.00e-153	535.00
IUUC-Mvi-060288	Microbotryum violaceum	50.67	1.00e-20	95.50
IUUC-Mmr-061343	Microcebus murinus	52.56	4.00e-144	504.00
IUUC-Mdo-062065	Monodelphis domestica	55.49	2.00e-146	512.00
IUUC-Mmu-063501	Mus musculus	52.85	1.00e-143	502.00
IUUC-Mac-064864	Musa acuminata	32.93	1.00e-52	200.00
IUUC-Mpu-066549	Mustela putorius furo	51.58	9.00e-136	477.00
IUUC-Mlu-067121	Myotis lucifugus	54.73	6.00e-131	461.00
IUUC-Nfi-068462	Neosartorya fischeri	32.13	2.00e-27	117.00
IUUC-Ncr-068838	Neurospora crassa	38.16	2.00e-28	120.00
IUUC-Nle-069854	Nomascus leucogenys	53.94	4.00e-147	514.00
IUUC-Opr-070803	Ochotona princeps	48.72	1.00e-122	433.00
IUUC-Ont-071642	Oreochromis niloticus	49.12	9.00e-123	433.00
IUUC-Oan-073675	Ornithorhynchus anatinus	54.62	8.00e-143	500.00
IUUC-Ocu-073863	Oryctolagus cuniculus	58.67	2.00e-126	445.00
IUUC-Oba-075682	Oryza barthii	32.25	8.00e-50	191.00
IUUC-Obr-076039	Oryza brachyantha	33.25	4.00e-51	195.00
IUUC-Ogu-078021	Oryza glumaepatula	32.27	3.00e-50	192.00
IUUC-Olo-081063	Oryza longistaminata	32.27	2.00e-50	193.00
IUUC-Ome-081930	Oryza meridionalis	32.75	5.00e-50	192.00
IUUC-Oni-082547	Oryza nivara	32.02	2.00e-49	190.00
IUUC-Opu-084089	Oryza punctata	32.02	1.00e-48	187.00
IUUC-Oru-084844	Oryza rufipogon	32.27	3.00e-50	192.00
IUUC-Osa-085582	Oryza sativa	32.27	3.00e-50	192.00
IUUC-Ola-087187	Oryzias latipes	48.71	2.00e-119	422.00
IUUC-Olu-087792	Ostreococcus lucimarinus	30.84	5.00e-52	198.00
IUUC-Oga-088390	Otolemur garnettii	52.36	1.00e-144	506.00
IUUC-Oar-089740	Ovis aries	50.79	3.00e-132	464.00
IUUC-Ptr-091581	Pan troglodytes	54.13	3.00e-148	518.00
IUUC-Pan-092258	Papio anubis	53.89	5.00e-147	514.00
IUUC-Psi-093761	Pelodiscus sinensis	56.64	2.00e-153	535.00
IUUC-Ppa-095428	Physcomitrella patens	35.10	1.00e-60	227.00
IUUC-Pfo-097357	Poecilia formosa	47.73	3.00e-121	428.00
IUUC-Pab-098520	Pongo abelii	53.74	3.00e-147	514.00
IUUC-Pop-099331	Populus trichocarpa	33.57	6.00e-57	214.00
IUUC-Ppe-101548	Prunus persica	33.10	2.00e-58	219.00
IUUC-Pva-103243	Pteropus vampyrus	53.60	6.00e-115	407.00
IUUC-Pgr-103591	Puccinia graminis	41.23	7.00e-22	99.40
IUUC-Ptt-103890	Puccinia triticina	40.83	9.00e-23	101.00
IUUC-Rno-105202	Rattus norvegicus	52.65	1.00e-143	503.00
IUUC-Sce-106250	Saccharomyces cerevisiae	28.27	5.00e-36	145.00
IUUC-Sha-107036	Sarcophilus harrisii	55.38	3.00e-150	525.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	26.65	2.00e-42	166.00
IUUC-Spo-108050	Schizosaccharomyces pombe	32.80	2.00e-35	143.00
IUUC-Sit-109838	Setaria italica	33.74	5.00e-51	195.00
IUUC-Sly-110872	Solanum lycopersicum	33.75	7.00e-55	207.00
IUUC-Stu-111933	Solanum tuberosum	33.50	5.00e-52	198.00
IUUC-Sbi-114587	Sorghum bicolor	32.60	5.00e-51	195.00
IUUC-Sre-115093	Sporisorium reilianum	45.63	1.00e-22	102.00
IUUC-Ssc-115462	Sus scrofa	52.01	1.00e-142	499.00
IUUC-Tgu-117186	Taeniopygia guttata	53.63	2.00e-136	479.00
IUUC-Tru-118310	Takifugu rubripes	48.62	4.00e-126	444.00
IUUC-Tsy-118927	Tarsius syrichta	51.16	1.00e-106	380.00
IUUC-Tni-120832	Tetraodon nigroviridis	49.15	3.00e-118	418.00
IUUC-Tca-121584	Theobroma cacao	34.19	3.00e-59	222.00
IUUC-Tre-122140	Trichoderma reesei	39.20	1.00e-30	127.00
IUUC-Tae-123476	Triticum aestivum	34.25	4.00e-54	205.00
IUUC-Tur-126239	Triticum urartu	34.25	3.00e-54	206.00
IUUC-Tme-127108	Tuber melanosporum	30.16	3.00e-45	176.00
IUUC-Ttr-129010	Tursiops truncatus	52.75	7.00e-140	490.00
IUUC-Uma-129499	Ustilago maydis	50.00	3.00e-22	100.00
IUUC-Vpa-130374	Vicugna pacos	46.67	5.00e-32	132.00
IUUC-Vvi-131136	Vitis vinifera	34.40	1.00e-56	213.00
IUUC-Xtr-132141	Xenopus tropicalis	51.65	3.00e-132	464.00
IUUC-Xma-133980	Xiphophorus maculatus	53.55	6.00e-121	427.00
IUUC-Yli-134457	Yarrowia lipolytica	43.56	4.00e-33	136.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence