iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tgu-117304

Ensembl Protein ID

ENSTGUP00000002624.1

UniProt Accession

H0YWF1; H0YWF1_TAEGU

Genbank Protein ID

ENSTGUP00000002624

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01041366

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000002514.1	ENSTGUT00000002652.1	ENSTGUP00000002624.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-08	32.2	2555	2583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWD 29
            d+++++++  d  +l++G+d+g+++vW 
   Q: 2555 DDKIRAIQLsRDgQYLLTGGDNGVVMVWQ 2583
           689*******888*************986 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

AIALPPIAKW PYQNGFTFHT WLRMDPVNNI NVDKDKPYLY CFRTNKGLGY SAHFVGSCLI 60
VTSIKSKGKG FQHCVKFDFK PQKWYMVTIV HIYNRWKNSE LRCYVNGELA SYGEITWFVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTATTGCCT TACCTCCTAT AGCCAAGTGG CCATACCAGA ATGGATTTAC TTTCCACACT 60
TGGCTAAGAA TGGATCCTGT AAATAATATT AATGTGGATA AGGATAAGCC TTATTTATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	39.33	7.00e-148	518.00
IUUC-Aml-001205	Ailuropoda melanoleuca	33.84	2.00e-142	501.00
IUUC-Atr-002998	Amborella trichopoda	38.10	8.00e-144	506.00
IUUC-Apl-003632	Anas platyrhynchos	88.78	0.00e+00	928.00
IUUC-Aca-005124	Anolis carolinensis	80.78	0.00e+00	4256.00
IUUC-Aly-005407	Arabidopsis lyrata	38.56	6.00e-147	514.00
IUUC-Ath-007674	Arabidopsis thaliana	38.05	4.00e-145	509.00
IUUC-Ame-011487	Astyanax mexicanus	68.93	1.00e-177	615.00
IUUC-Bta-012509	Bos taurus	76.71	0.00e+00	4036.00
IUUC-Bdi-015051	Brachypodium distachyon	38.05	1.00e-145	510.00
IUUC-Bol-015261	Brassica oleracea	33.86	2.00e-140	494.00
IUUC-Bra-016877	Brassica rapa	38.02	3.00e-139	490.00
IUUC-Cja-018744	Callithrix jacchus	91.39	0.00e+00	1467.00
IUUC-Cfa-020786	Canis familiaris	78.99	0.00e+00	4151.00
IUUC-Cpo-021636	Cavia porcellus	77.59	0.00e+00	4090.00
IUUC-Csa-023251	Chlorocebus sabaeus	33.33	1.00e-141	498.00
IUUC-Cho-024721	Choloepus hoffmanni	57.19	4.00e-98	352.00
IUUC-Csv-026337	Ciona savignyi	32.35	1.00e-110	394.00
IUUC-Dre-028627	Danio rerio	39.93	1.00e-146	515.00
IUUC-Dno-029573	Dasypus novemcinctus	33.90	2.00e-139	491.00
IUUC-Dme-031593	Drosophila melanogaster	35.11	2.00e-140	494.00
IUUC-Ete-032481	Echinops telfairi	86.96	0.00e+00	1279.00
IUUC-Eca-033893	Equus caballus	78.69	0.00e+00	4165.00
IUUC-Fca-035726	Felis catus	91.22	0.00e+00	974.00
IUUC-Fal-036871	Ficedula albicollis	94.38	0.00e+00	4978.00
IUUC-Gmo-039339	Gadus morhua	33.73	1.00e-128	455.00
IUUC-Gga-041206	Gallus gallus	88.20	0.00e+00	4736.00
IUUC-Gac-041466	Gasterosteus aculeatus	35.92	4.00e-141	496.00
IUUC-Gma-042772	Glycine max	39.44	4.00e-149	523.00
IUUC-Ggo-045191	Gorilla gorilla	36.06	3.00e-129	456.00
IUUC-Hsa-045763	Homo sapiens	69.06	0.00e+00	764.00
IUUC-Hvu-047134	Hordeum vulgare	38.72	4.00e-149	522.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	78.69	0.00e+00	4150.00
IUUC-Lch-050027	Latimeria chalumnae	85.13	0.00e+00	1386.00
IUUC-Lpe-050958	Leersia perrieri	32.50	5.00e-148	519.00
IUUC-Loc-052771	Lepisosteus oculatus	64.20	0.00e+00	1946.00
IUUC-Laf-053724	Loxodonta africana	77.33	0.00e+00	4137.00
IUUC-Mcc-055200	Macaca mulatta	90.86	0.00e+00	1459.00
IUUC-Meu-056286	Macropus eugenii	33.93	5.00e-135	476.00
IUUC-Mtr-058372	Medicago truncatula	39.23	9.00e-143	502.00
IUUC-Mga-059851	Meleagris gallopavo	95.03	0.00e+00	1793.00
IUUC-Mmr-061112	Microcebus murinus	78.46	0.00e+00	4177.00
IUUC-Mdo-062727	Monodelphis domestica	78.75	0.00e+00	3913.00
IUUC-Mmu-064194	Mus musculus	91.07	0.00e+00	1462.00
IUUC-Mac-064991	Musa acuminata	35.14	9.00e-151	529.00
IUUC-Mpu-066074	Mustela putorius furo	78.97	0.00e+00	4148.00
IUUC-Mlu-067308	Myotis lucifugus	75.78	0.00e+00	4036.00
IUUC-Nle-069582	Nomascus leucogenys	33.06	2.00e-141	497.00
IUUC-Opr-070275	Ochotona princeps	38.62	4.00e-122	433.00
IUUC-Ont-072584	Oreochromis niloticus	33.97	4.00e-137	483.00
IUUC-Oan-073413	Ornithorhynchus anatinus	92.95	0.00e+00	1490.00
IUUC-Ocu-074483	Oryctolagus cuniculus	82.26	0.00e+00	2145.00
IUUC-Oba-075426	Oryza barthii	40.57	7.00e-147	516.00
IUUC-Obr-076907	Oryza brachyantha	39.97	4.00e-147	517.00
IUUC-Ogl-077620	Oryza glaberrima	38.45	4.00e-141	495.00
IUUC-Ogu-078751	Oryza glumaepatula	40.70	1.00e-148	521.00
IUUC-Oin-079673	Oryza indica	38.45	2.00e-141	498.00
IUUC-Olo-080417	Oryza longistaminata	38.45	4.00e-141	496.00
IUUC-Ome-081931	Oryza meridionalis	33.36	2.00e-147	518.00
IUUC-Oni-082349	Oryza nivara	40.43	3.00e-147	516.00
IUUC-Opu-083624	Oryza punctata	36.67	2.00e-123	437.00
IUUC-Oru-085197	Oryza rufipogon	40.43	8.00e-147	516.00
IUUC-Osa-085645	Oryza sativa	31.05	6.00e-28	117.00
IUUC-Ola-087242	Oryzias latipes	72.38	0.00e+00	2092.00
IUUC-Olu-087890	Ostreococcus lucimarinus	34.05	3.00e-120	425.00
IUUC-Oga-088409	Otolemur garnettii	84.32	0.00e+00	2545.00
IUUC-Oar-089217	Ovis aries	78.54	0.00e+00	4144.00
IUUC-Ptr-091015	Pan troglodytes	36.30	1.00e-135	478.00
IUUC-Psi-093570	Pelodiscus sinensis	33.90	8.00e-137	482.00
IUUC-Ppa-095295	Physcomitrella patens	37.50	1.00e-144	508.00
IUUC-Pfo-096377	Poecilia formosa	37.88	8.00e-138	486.00
IUUC-Pab-098101	Pongo abelii	33.06	8.00e-141	495.00
IUUC-Pop-099604	Populus trichocarpa	38.08	1.00e-142	501.00
IUUC-Pca-100240	Procavia capensis	83.61	0.00e+00	1504.00
IUUC-Ppe-101836	Prunus persica	37.55	1.00e-146	514.00
IUUC-Pva-102558	Pteropus vampyrus	36.63	2.00e-136	480.00
IUUC-Rno-104971	Rattus norvegicus	90.72	0.00e+00	1542.00
IUUC-Sha-107387	Sarcophilus harrisii	78.83	0.00e+00	4206.00
IUUC-Smo-109504	Selaginella moellendorffii	34.16	5.00e-139	488.00
IUUC-Sit-110075	Setaria italica	33.61	2.00e-148	521.00
IUUC-Sly-111033	Solanum lycopersicum	38.45	5.00e-142	499.00
IUUC-Sar-113411	Sorex araneus	38.03	1.00e-110	394.00
IUUC-Sbi-113954	Sorghum bicolor	36.12	3.00e-113	402.00
IUUC-Tru-118226	Takifugu rubripes	72.79	0.00e+00	1201.00
IUUC-Tsy-119218	Tarsius syrichta	37.04	1.00e-110	394.00
IUUC-Tni-120595	Tetraodon nigroviridis	65.16	0.00e+00	1026.00
IUUC-Tca-121572	Theobroma cacao	33.06	3.00e-152	533.00
IUUC-Tae-123719	Triticum aestivum	36.71	5.00e-123	435.00
IUUC-Tur-126212	Triticum urartu	39.30	1.00e-144	508.00
IUUC-Tbe-127556	Tupaia belangeri	48.40	4.00e-96	345.00
IUUC-Ttr-128452	Tursiops truncatus	74.66	0.00e+00	3844.00
IUUC-Vpa-130417	Vicugna pacos	37.45	2.00e-106	380.00
IUUC-Vvi-130860	Vitis vinifera	39.23	5.00e-145	509.00
IUUC-Xtr-132038	Xenopus tropicalis	34.34	1.00e-132	468.00
IUUC-Xma-133685	Xiphophorus maculatus	36.95	6.00e-145	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence