iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mcc-054977

Ensembl Protein ID

ENSMMUP00000038871.1

UniProt Accession

F6TTW3; F6TTW3_MACMU

Genbank Protein ID

ENSMMUP00000038871

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

JSUE03007525

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000004093.3	ENSMMUT00000045826.2	ENSMMUP00000038871.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-20	71.8	118	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H+d+vtc+ +  +d++++sGs  g i + +++t+
   Q: 118  HKDEVTCVTYnwNDCYIASGSLSGEIILHSVTTN 151
           ********887799************99998876 PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

MQENLRFASS GDDIKIWDAS SMTLVDTFNP HTSPHGISSV CWSSNNNFLV TASSSGDKIV 60
VSSCKCKPVP LLELAEGQKQ TCVNLNSTSM YLVSGGLNNI VNIWDLKSKR IHRSLKDHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGGGGCG CGGCGGCGCG TTGGGCTGGG AAGTGTCTGG GGAGCCGCGG GCTGGGGTCG 60
CACACCTCCC CGAGAGGCGG CCCAGGTCAA CTAGGGTAGG TTGGTGGCGG CCCTGGTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0071539--P:protein localization to centrosome

KEGG

mcc:713673

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	38.39	7.00e-18	86.30
IUUC-Aml-002397	Ailuropoda melanoleuca	89.39	0.00e+00	1177.00
IUUC-Atr-002464	Amborella trichopoda	30.23	3.00e-39	157.00
IUUC-Apl-003870	Anas platyrhynchos	65.53	0.00e+00	856.00
IUUC-Aca-004925	Anolis carolinensis	59.97	0.00e+00	766.00
IUUC-Aly-005931	Arabidopsis lyrata	29.89	1.00e-40	161.00
IUUC-Ath-006681	Arabidopsis thaliana	28.70	2.00e-40	161.00
IUUC-Ame-010906	Astyanax mexicanus	45.28	4.00e-152	531.00
IUUC-Bta-013389	Bos taurus	89.85	0.00e+00	1176.00
IUUC-Bdi-014340	Brachypodium distachyon	29.00	2.00e-40	160.00
IUUC-Bol-016282	Brassica oleracea	30.68	8.00e-41	162.00
IUUC-Bra-017178	Brassica rapa	30.68	1.00e-40	161.00
IUUC-Cja-019541	Callithrix jacchus	94.85	0.00e+00	1256.00
IUUC-Cfa-021218	Canis familiaris	88.94	0.00e+00	1164.00
IUUC-Cpo-021697	Cavia porcellus	83.51	0.00e+00	1101.00
IUUC-Csa-023620	Chlorocebus sabaeus	98.79	0.00e+00	1324.00
IUUC-Cho-025105	Choloepus hoffmanni	83.82	0.00e+00	904.00
IUUC-Cin-025293	Ciona intestinalis	41.47	3.00e-63	236.00
IUUC-Csv-026234	Ciona savignyi	35.88	1.00e-50	192.00
IUUC-Dre-028251	Danio rerio	63.21	3.00e-104	372.00
IUUC-Dno-029281	Dasypus novemcinctus	87.27	0.00e+00	961.00
IUUC-Dor-031020	Dipodomys ordii	75.00	6.00e-171	594.00
IUUC-Ete-033113	Echinops telfairi	84.87	0.00e+00	677.00
IUUC-Eca-034230	Equus caballus	90.62	0.00e+00	1172.00
IUUC-Eeu-034671	Erinaceus europaeus	74.91	0.00e+00	785.00
IUUC-Fca-035775	Felis catus	90.61	0.00e+00	1197.00
IUUC-Fal-037557	Ficedula albicollis	63.37	0.00e+00	771.00
IUUC-Gmo-038586	Gadus morhua	59.41	1.00e-101	363.00
IUUC-Gga-040153	Gallus gallus	64.60	0.00e+00	850.00
IUUC-Gac-041385	Gasterosteus aculeatus	43.01	1.00e-134	473.00
IUUC-Gma-042844	Glycine max	31.32	1.00e-42	167.00
IUUC-Ggo-044576	Gorilla gorilla	97.27	0.00e+00	1309.00
IUUC-Hsa-046198	Homo sapiens	97.73	0.00e+00	1315.00
IUUC-Hvu-047794	Hordeum vulgare	38.39	3.00e-18	84.30
IUUC-Lch-050561	Latimeria chalumnae	50.53	2.00e-160	559.00
IUUC-Lpe-051469	Leersia perrieri	28.53	1.00e-37	151.00
IUUC-Loc-052816	Lepisosteus oculatus	49.01	1.00e-153	537.00
IUUC-Laf-053880	Loxodonta africana	87.59	0.00e+00	1107.00
IUUC-Meu-056141	Macropus eugenii	62.48	1.00e-174	606.00
IUUC-Mtr-058441	Medicago truncatula	31.25	2.00e-41	164.00
IUUC-Mga-060141	Meleagris gallopavo	62.76	0.00e+00	814.00
IUUC-Mmr-061201	Microcebus murinus	91.67	0.00e+00	1245.00
IUUC-Mdo-061855	Monodelphis domestica	73.17	0.00e+00	950.00
IUUC-Mmu-064342	Mus musculus	84.55	0.00e+00	1119.00
IUUC-Mac-065368	Musa acuminata	29.70	4.00e-40	160.00
IUUC-Mpu-066191	Mustela putorius furo	89.70	0.00e+00	1179.00
IUUC-Mlu-067310	Myotis lucifugus	87.42	0.00e+00	1137.00
IUUC-Nle-069990	Nomascus leucogenys	97.73	0.00e+00	1316.00
IUUC-Opr-070336	Ochotona princeps	81.67	0.00e+00	1040.00
IUUC-Ont-071675	Oreochromis niloticus	44.97	3.00e-143	502.00
IUUC-Oan-072772	Ornithorhynchus anatinus	70.98	0.00e+00	777.00
IUUC-Ocu-074095	Oryctolagus cuniculus	91.06	0.00e+00	1217.00
IUUC-Oba-075327	Oryza barthii	29.32	8.00e-39	155.00
IUUC-Obr-076119	Oryza brachyantha	29.69	3.00e-39	157.00
IUUC-Ogl-077820	Oryza glaberrima	29.13	4.00e-38	153.00
IUUC-Ogu-078679	Oryza glumaepatula	29.61	1.00e-38	155.00
IUUC-Oin-079891	Oryza indica	29.41	6.00e-39	156.00
IUUC-Olo-080414	Oryza longistaminata	31.48	2.00e-37	151.00
IUUC-Ome-081888	Oryza meridionalis	29.69	6.00e-39	155.00
IUUC-Oni-082417	Oryza nivara	29.41	9.00e-39	155.00
IUUC-Opu-083393	Oryza punctata	28.93	7.00e-39	155.00
IUUC-Oru-084698	Oryza rufipogon	29.41	5.00e-39	156.00
IUUC-Osa-086121	Oryza sativa	29.41	9.00e-39	155.00
IUUC-Ola-086806	Oryzias latipes	41.32	1.00e-141	496.00
IUUC-Olu-087591	Ostreococcus lucimarinus	24.28	4.00e-16	79.30
IUUC-Oga-088622	Otolemur garnettii	88.97	0.00e+00	1189.00
IUUC-Oar-090391	Ovis aries	86.81	0.00e+00	1013.00
IUUC-Ptr-091036	Pan troglodytes	97.27	0.00e+00	1310.00
IUUC-Pan-092576	Papio anubis	99.70	0.00e+00	1337.00
IUUC-Psi-093450	Pelodiscus sinensis	68.51	0.00e+00	880.00
IUUC-Pma-094101	Petromyzon marinus	55.45	8.00e-104	369.00
IUUC-Ppa-095636	Physcomitrella patens	31.31	5.00e-42	166.00
IUUC-Pfo-097142	Poecilia formosa	59.33	1.00e-108	387.00
IUUC-Pab-097829	Pongo abelii	97.27	0.00e+00	1307.00
IUUC-Pop-098972	Populus trichocarpa	32.59	6.00e-40	159.00
IUUC-Pca-100217	Procavia capensis	84.82	0.00e+00	710.00
IUUC-Ppe-101502	Prunus persica	30.50	3.00e-40	160.00
IUUC-Pva-102736	Pteropus vampyrus	88.33	0.00e+00	1160.00
IUUC-Rno-104977	Rattus norvegicus	85.00	0.00e+00	1076.00
IUUC-Sha-107003	Sarcophilus harrisii	73.77	0.00e+00	957.00
IUUC-Smo-109328	Selaginella moellendorffii	30.03	4.00e-42	166.00
IUUC-Sit-109796	Setaria italica	28.40	1.00e-39	158.00
IUUC-Sly-110941	Solanum lycopersicum	30.94	3.00e-37	150.00
IUUC-Stu-112314	Solanum tuberosum	30.94	9.00e-38	152.00
IUUC-Sar-112926	Sorex araneus	81.67	0.00e+00	1075.00
IUUC-Sbi-113822	Sorghum bicolor	28.40	1.00e-26	115.00
IUUC-Ssc-116242	Sus scrofa	91.15	0.00e+00	657.00
IUUC-Tgu-116765	Taeniopygia guttata	64.71	0.00e+00	798.00
IUUC-Tru-117738	Takifugu rubripes	43.04	6.00e-147	514.00
IUUC-Tsy-118856	Tarsius syrichta	86.67	0.00e+00	1080.00
IUUC-Tni-120871	Tetraodon nigroviridis	44.21	1.00e-149	523.00
IUUC-Tca-120965	Theobroma cacao	30.31	1.00e-39	158.00
IUUC-Tae-123588	Triticum aestivum	28.95	7.00e-40	159.00
IUUC-Tur-126840	Triticum urartu	28.69	1.00e-39	158.00
IUUC-Ttr-128551	Tursiops truncatus	88.33	0.00e+00	1150.00
IUUC-Vpa-130324	Vicugna pacos	90.00	0.00e+00	1162.00
IUUC-Vvi-131699	Vitis vinifera	31.75	7.00e-40	159.00
IUUC-Xtr-131956	Xenopus tropicalis	60.97	0.00e+00	810.00
IUUC-Xma-132982	Xiphophorus maculatus	46.19	2.00e-108	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence