iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051523

Ensembl Protein ID

LPERR01G04710.1

UniProt Accession

A0A0D9UXG3; A0A0D9UXG3_9ORYZ

Protein Name

Ubiquitinyl hydrolase 1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G04710	LPERR01G04710.1	LPERR01G04710.1
LPERR01G04710	LPERR01G04710.2	LPERR01G04710.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.30e-42	144.2	336	786
UBD/Alpha-Helix/UBA	1.10e-16	61.2	664	702

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 32   kkkeklneenpkepkgellkslqklfeelw........kskkkavsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkee 117
           +  +++ +++p +p+ +l ++++kl + l+        ++ ++ + pr+++++++++++efs+++qqDa +f+ +l+dq++++           
   Q: 336  QSLKATFANSPADPTLDLNMQMTKLAHGLLsgkyslpnQEGQEGIRPRMFKTVIAAKHPEFSSMRQQDALDFFLHLIDQVDQAD---------- 419
           4444555667789999*************76666666688888*************************************9977.......... PP
   S: 118  eeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs.sreepfldlslpvpgkeetkke......................... 185
                            + k++    + F++ ++++++c++ + ++ +r +  l+ls+p+++ ++  ke                         
   Q: 420  -----------------PGKHELNPFTGFKFIIEERLQCPSGKVSYnKRSDYILSLSIPLHEATN--KEqleafhekkaamdldgkevsneeiv 494
           .................44455555678***********98776664555555666666665554..44569********************** PP
   S: 186  ....slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts........ 267
                l+ cL+sf+ +ee+ +   +y++  ++k++a k+ ++k++P++L+l++ +f + e++++++k++ ++++p+ +d+s++ ++        
   Q: 495  rprvPLEACLASFSGAEEVPD---FYSTALNSKTTAIKTAGFKTFPDYLVLQMRKF-VMEAGWVPKKLDVYIDVPDIIDISHMRSKgmqpgeel 584
           *******************97...********************************.77889*******************9999988888888 PP
   S: 268  ..........................................................................peekqke............. 274
                                                                                     +     e             
   Q: 585  lpegasgdnkgepaypvasedivsqlasmgfnylhcqkaaistsntgveeamnwllshmddpdiddpiskgsqaT-----Eqtvdetsvqtlvs 673
           888888888888777777777777777777777777777777766666666666666666666666666555550.....05555566666666 PP
   S: 275  .......................................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDs 312
                                                                  + +Y+L+a v+H+G s+++GHYva+v + +g+W+ f+Ds
   Q: 674  fgfqedvarkalaasggnieratdwifshpeasisvpadsstsniesddahmpdgSGRYKLMAFVSHMGtSTHCGHYVAHVLK-DGRWVIFNDS 766
           6666666666777777777777777777777777777777777888889999999****************************.9********* PP
   S: 313  kVtevkeeevleetgstaYvlfYkr 337
           kV ++   +  +   + +Y++f++r
   Q: 767  KVAAS--VDLPK---DMGYLYFFQR 786
           **999..68888...999**99997 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
           de  ++ lv+ GF ++ a++aL+a+++n+e+A+++++++
   Q: 664  DETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSH 702
           7999*********************************97 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MDLLRSHLHK VRIPEPTNRI HKDECCVSFD TPRSEGGLYV DMTSFLGFGK EYVAWNFERT 60
GNPVYLHIVQ RRKPEPDDEA DRPLKKPTLL AIGVEGGFTD QEPEYDESFE IVILPEFTSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAACTTTCA CTTGGTGTTT ACGATCTCAA GAAAATAAAA CACAACTGTC TCAAAAAATG 60
CAATAAATGC GCCGGCCAAA GCCAAACACC ACGGTGTTTA AATTCGCCTG GTGTTTAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP

SMART

SM00165--UBA
SM00290--ZnF_UBP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000394	Aegilops tauschii	82.25	0.00e+00	1259.00
IUUC-Aml-002104	Ailuropoda melanoleuca	45.84	0.00e+00	700.00
IUUC-Atr-002580	Amborella trichopoda	68.78	5.00e-165	574.00
IUUC-Apl-003774	Anas platyrhynchos	46.46	0.00e+00	686.00
IUUC-Aca-005368	Anolis carolinensis	47.86	0.00e+00	730.00
IUUC-Aly-005727	Arabidopsis lyrata	67.16	0.00e+00	1070.00
IUUC-Ath-006974	Arabidopsis thaliana	67.40	0.00e+00	1075.00
IUUC-Ago-007890	Ashbya gossypii	27.30	7.00e-66	244.00
IUUC-Acl-008057	Aspergillus clavatus	34.04	9.00e-105	374.00
IUUC-Afl-008547	Aspergillus flavus	34.90	1.00e-95	343.00
IUUC-Afu-008805	Aspergillus fumigatus	32.26	2.00e-90	325.00
IUUC-Ani-009441	Aspergillus nidulans	33.29	1.00e-80	293.00
IUUC-Ang-009720	Aspergillus niger	34.10	4.00e-99	355.00
IUUC-Aor-010111	Aspergillus oryzae	33.73	5.00e-105	374.00
IUUC-Ate-010531	Aspergillus terreus	31.35	8.00e-85	307.00
IUUC-Ame-011470	Astyanax mexicanus	40.05	3.00e-174	604.00
IUUC-Bgr-012183	Blumeria graminis	31.77	2.00e-91	329.00
IUUC-Bta-013179	Bos taurus	46.06	0.00e+00	705.00
IUUC-Bci-013858	Botrytis cinerea	32.40	2.00e-99	355.00
IUUC-Bdi-014904	Brachypodium distachyon	86.85	0.00e+00	1380.00
IUUC-Bol-015536	Brassica oleracea	67.81	0.00e+00	1070.00
IUUC-Bra-017939	Brassica rapa	67.85	0.00e+00	1073.00
IUUC-Cel-018625	Caenorhabditis elegans	31.59	4.00e-101	362.00
IUUC-Cja-019063	Callithrix jacchus	45.15	0.00e+00	696.00
IUUC-Cfa-020976	Canis familiaris	47.21	0.00e+00	719.00
IUUC-Cpo-022265	Cavia porcellus	46.98	0.00e+00	719.00
IUUC-Cre-022640	Chlamydomonas reinhardtii	41.20	2.00e-111	395.00
IUUC-Csa-024177	Chlorocebus sabaeus	46.99	2.00e-179	622.00
IUUC-Cho-024522	Choloepus hoffmanni	36.06	2.00e-121	429.00
IUUC-Cin-025411	Ciona intestinalis	41.49	4.00e-175	607.00
IUUC-Csv-026347	Ciona savignyi	41.30	1.00e-170	593.00
IUUC-Cgl-026667	Colletotrichum gloeosporioides	30.32	4.00e-84	305.00
IUUC-Cne-026831	Cryptococcus neoformans	34.42	7.00e-102	364.00
IUUC-Cme-027335	Cyanidioschyzon merolae	29.80	1.00e-26	115.00
IUUC-Dre-027982	Danio rerio	41.64	7.00e-174	603.00
IUUC-Dno-029034	Dasypus novemcinctus	46.18	0.00e+00	708.00
IUUC-Dor-030130	Dipodomys ordii	36.27	1.00e-98	353.00
IUUC-Dse-031467	Dothistroma septosporum	32.57	3.00e-104	372.00
IUUC-Dme-032075	Drosophila melanogaster	43.14	2.00e-179	621.00
IUUC-Ete-032865	Echinops telfairi	44.05	0.00e+00	652.00
IUUC-Eca-034059	Equus caballus	46.20	0.00e+00	705.00
IUUC-Eeu-035304	Erinaceus europaeus	43.40	3.00e-179	621.00
IUUC-Fca-035515	Felis catus	46.18	0.00e+00	709.00
IUUC-Fal-037271	Ficedula albicollis	47.33	0.00e+00	671.00
IUUC-Fox-037745	Fusarium oxysporum	33.25	2.00e-101	363.00
IUUC-Fso-038158	Fusarium solani	32.08	2.00e-94	339.00
IUUC-Gmo-039071	Gadus morhua	43.26	2.00e-175	608.00
IUUC-Ggr-040098	Gaeumannomyces graminis	31.93	1.00e-92	333.00
IUUC-Gga-040635	Gallus gallus	46.65	0.00e+00	723.00
IUUC-Gac-042528	Gasterosteus aculeatus	42.35	0.00e+00	628.00
IUUC-Gma-043614	Glycine max	66.63	0.00e+00	1057.00
IUUC-Ggo-044602	Gorilla gorilla	46.30	0.00e+00	709.00
IUUC-Hsa-045959	Homo sapiens	46.30	0.00e+00	709.00
IUUC-Hvu-047563	Hordeum vulgare	80.84	0.00e+00	1007.00
IUUC-Itr-048712	Ictidomys tridecemlineatus	45.83	0.00e+00	712.00
IUUC-Kpa-049156	Komagataella pastoris	30.13	3.00e-90	325.00
IUUC-Lch-049648	Latimeria chalumnae	47.20	0.00e+00	712.00
IUUC-Loc-052072	Lepisosteus oculatus	41.44	5.00e-177	613.00
IUUC-Lma-053216	Leptosphaeria maculans	33.82	9.00e-97	348.00
IUUC-Laf-054327	Loxodonta africana	46.06	0.00e+00	708.00
IUUC-Mcc-055443	Macaca mulatta	46.18	0.00e+00	704.00
IUUC-Meu-056298	Macropus eugenii	48.48	2.00e-144	506.00
IUUC-Mor-057106	Magnaporthe oryzae	31.97	1.00e-99	357.00
IUUC-Mpo-057589	Magnaporthe poae	31.86	6.00e-93	334.00
IUUC-Mtr-058680	Medicago truncatula	66.91	0.00e+00	1093.00
IUUC-Mla-058903	Melampsora laricipopulina	31.39	1.00e-90	327.00
IUUC-Mga-059669	Meleagris gallopavo	46.43	0.00e+00	679.00
IUUC-Mvi-060476	Microbotryum violaceum	31.78	1.00e-86	313.00
IUUC-Mmr-060575	Microcebus murinus	46.18	0.00e+00	707.00
IUUC-Mdo-062183	Monodelphis domestica	47.11	0.00e+00	713.00
IUUC-Mmu-063592	Mus musculus	46.41	0.00e+00	710.00
IUUC-Mac-065634	Musa acuminata	70.63	0.00e+00	631.00
IUUC-Mpu-066082	Mustela putorius furo	46.97	0.00e+00	711.00
IUUC-Mlu-067345	Myotis lucifugus	45.61	0.00e+00	701.00
IUUC-Nfi-068558	Neosartorya fischeri	34.15	2.00e-102	366.00
IUUC-Ncr-068960	Neurospora crassa	29.66	2.00e-83	303.00
IUUC-Nle-070173	Nomascus leucogenys	47.21	0.00e+00	717.00
IUUC-Opr-070556	Ochotona princeps	46.06	0.00e+00	718.00
IUUC-Ont-071502	Oreochromis niloticus	44.62	0.00e+00	630.00
IUUC-Oan-072959	Ornithorhynchus anatinus	49.35	3.00e-57	213.00
IUUC-Ocu-074861	Oryctolagus cuniculus	46.97	0.00e+00	725.00
IUUC-Oba-075109	Oryza barthii	93.01	0.00e+00	1481.00
IUUC-Obr-076292	Oryza brachyantha	90.33	0.00e+00	1420.00
IUUC-Ogl-077065	Oryza glaberrima	91.07	0.00e+00	1474.00
IUUC-Ogu-078776	Oryza glumaepatula	93.01	0.00e+00	1484.00
IUUC-Oin-080048	Oryza indica	90.69	0.00e+00	1452.00
IUUC-Olo-080711	Oryza longistaminata	91.09	0.00e+00	1370.00
IUUC-Ome-081506	Oryza meridionalis	93.16	0.00e+00	1380.00
IUUC-Oni-082320	Oryza nivara	90.49	0.00e+00	1472.00
IUUC-Opu-083801	Oryza punctata	93.90	0.00e+00	1464.00
IUUC-Oru-085139	Oryza rufipogon	90.37	0.00e+00	1467.00
IUUC-Osa-085713	Oryza sativa	91.07	0.00e+00	1476.00
IUUC-Ola-086951	Oryzias latipes	41.29	1.00e-177	615.00
IUUC-Olu-087822	Ostreococcus lucimarinus	40.46	2.00e-158	551.00
IUUC-Oga-088625	Otolemur garnettii	45.54	0.00e+00	700.00
IUUC-Oar-089995	Ovis aries	45.09	0.00e+00	697.00
IUUC-Ptr-090640	Pan troglodytes	45.37	0.00e+00	707.00
IUUC-Pan-091974	Papio anubis	45.38	0.00e+00	698.00
IUUC-Psi-093957	Pelodiscus sinensis	46.20	0.00e+00	729.00
IUUC-Pma-094242	Petromyzon marinus	43.83	8.00e-90	323.00
IUUC-Pno-094835	Phaeosphaeria nodorum	35.02	1.00e-87	317.00
IUUC-Ppa-095901	Physcomitrella patens	59.98	0.00e+00	973.00
IUUC-Pfo-097148	Poecilia formosa	43.43	0.00e+00	630.00
IUUC-Pab-098672	Pongo abelii	41.17	1.00e-170	592.00
IUUC-Pop-098943	Populus trichocarpa	69.61	0.00e+00	1091.00
IUUC-Pca-100738	Procavia capensis	42.30	4.00e-127	448.00
IUUC-Ppe-101315	Prunus persica	68.13	0.00e+00	1083.00
IUUC-Pva-102154	Pteropus vampyrus	45.83	0.00e+00	700.00
IUUC-Pgr-103343	Puccinia graminis	30.58	1.00e-81	296.00
IUUC-Ptt-103928	Puccinia triticina	29.39	3.00e-82	299.00
IUUC-Pte-104306	Pyrenophora teres	32.23	8.00e-83	301.00
IUUC-Pyt-104696	Pyrenophora triticirepentis	32.93	1.00e-86	314.00
IUUC-Rno-105801	Rattus norvegicus	46.53	0.00e+00	714.00
IUUC-Sce-106304	Saccharomyces cerevisiae	30.21	4.00e-59	222.00
IUUC-Sha-107635	Sarcophilus harrisii	47.74	0.00e+00	716.00
IUUC-Sja-107678	Schizosaccharomyces japonicus	30.65	4.00e-82	298.00
IUUC-Spo-108144	Schizosaccharomyces pombe	31.76	5.00e-97	348.00
IUUC-Smo-108848	Selaginella moellendorffii	57.73	0.00e+00	875.00
IUUC-Sit-110728	Setaria italica	86.23	0.00e+00	1392.00
IUUC-Sly-111523	Solanum lycopersicum	64.91	0.00e+00	1083.00
IUUC-Stu-112498	Solanum tuberosum	61.76	3.00e-07	49.70
IUUC-Sar-113733	Sorex araneus	42.00	8.00e-81	294.00
IUUC-Sbi-114419	Sorghum bicolor	86.35	0.00e+00	1382.00
IUUC-Sre-115225	Sporisorium reilianum	31.99	5.00e-94	338.00
IUUC-Ssc-115686	Sus scrofa	45.14	0.00e+00	703.00
IUUC-Tgu-117346	Taeniopygia guttata	46.48	0.00e+00	704.00
IUUC-Tru-118350	Takifugu rubripes	41.84	3.00e-180	625.00
IUUC-Tsy-119278	Tarsius syrichta	38.11	9.00e-150	523.00
IUUC-Tni-120658	Tetraodon nigroviridis	41.50	4.00e-174	604.00
IUUC-Tca-121585	Theobroma cacao	67.84	0.00e+00	1070.00
IUUC-Tre-122043	Trichoderma reesei	33.37	2.00e-102	366.00
IUUC-Tvi-122303	Trichoderma virens	32.69	2.00e-96	346.00
IUUC-Tae-123798	Triticum aestivum	84.00	0.00e+00	1355.00
IUUC-Tur-126732	Triticum urartu	82.34	0.00e+00	1315.00
IUUC-Tme-126909	Tuber melanosporum	32.86	4.00e-87	315.00
IUUC-Tbe-127261	Tupaia belangeri	38.21	2.00e-103	370.00
IUUC-Ttr-129119	Tursiops truncatus	49.87	2.00e-98	352.00
IUUC-Uma-129599	Ustilago maydis	33.22	3.00e-106	379.00
IUUC-Vda-129688	Verticillium dahliae	31.91	3.00e-91	328.00
IUUC-Vpa-130170	Vicugna pacos	35.55	9.00e-133	467.00
IUUC-Vvi-131116	Vitis vinifera	69.10	0.00e+00	1069.00
IUUC-Xtr-131953	Xenopus tropicalis	44.11	0.00e+00	664.00
IUUC-Xma-133837	Xiphophorus maculatus	43.31	0.00e+00	628.00
IUUC-Yli-134510	Yarrowia lipolytica	33.09	7.00e-97	347.00
IUUC-Zma-135786	Zea mays	84.62	0.00e+00	1321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence