iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000005207.1	ENSLACT00000005913.1	ENSLACP00000005861.1
ENSLACG00000005207.1	ENSLACT00000005914.1	ENSLACP00000005862.1
ENSLACG00000005207.1	ENSLACT00000005915.1	ENSLACP00000005863.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBAN	50.13	3.00e-81	300.00	IUUC-Hsa-046624
UBD/Alpha-Helix/UBAN	47.48	1.00e-78	291.00	IUUC-Mmu-063409
UBD/Alpha-Helix/UBAN	47.49	2.00e-79	293.00	IUUC-Rno-105812

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

VMSQEVNGPT LSGEFEVLDH GAVNGAITSQ LDVFTPEETL QQIQELIKEN GELKEAVKQT 60
NQAMKERYDE LSAWRGRQKE EREFLERKFQ EAKEKLLALT KENEELKKTV QIQEEKHQKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGACAGAG GAGGGACGTT TGCTGTACAG AAACAGCAGG AAGTCTTCCT GGATTTTAGA 60
ATTGCTACCC TCTTGCTTTT CTTTTGTGTC ACTAAGTCTG CCAACATAAA AGCCACAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR021063--NEMO_N
IPR032939--Optineurin

Pfam

PF11577--NEMO

Gene Ontology

GO:0031410--C:cytoplasmic vesicle
GO:0005794--C:Golgi apparatus
GO:0006914--P:autophagy
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002037	Ailuropoda melanoleuca	47.27	5.00e-69	255.00
IUUC-Apl-003812	Anas platyrhynchos	47.22	1.00e-76	280.00
IUUC-Aca-004625	Anolis carolinensis	48.70	9.00e-73	267.00
IUUC-Bta-013240	Bos taurus	49.26	2.00e-77	282.00
IUUC-Cja-019911	Callithrix jacchus	49.24	9.00e-78	284.00
IUUC-Cfa-020330	Canis familiaris	49.51	3.00e-77	282.00
IUUC-Cpo-021753	Cavia porcellus	49.01	7.00e-69	254.00
IUUC-Csa-023662	Chlorocebus sabaeus	49.62	6.00e-77	281.00
IUUC-Cho-024574	Choloepus hoffmanni	45.15	7.00e-35	141.00
IUUC-Dre-027720	Danio rerio	38.92	1.00e-59	223.00
IUUC-Dno-029079	Dasypus novemcinctus	50.26	4.00e-73	268.00
IUUC-Dor-030890	Dipodomys ordii	46.21	5.00e-73	268.00
IUUC-Ete-032568	Echinops telfairi	47.44	5.00e-64	238.00
IUUC-Eca-033528	Equus caballus	48.81	1.00e-72	267.00
IUUC-Eeu-035219	Erinaceus europaeus	49.75	3.00e-84	306.00
IUUC-Fca-035852	Felis catus	48.10	6.00e-75	275.00
IUUC-Fal-036862	Ficedula albicollis	48.63	3.00e-71	262.00
IUUC-Gmo-038735	Gadus morhua	37.40	1.00e-46	180.00
IUUC-Gga-040939	Gallus gallus	47.52	2.00e-74	273.00
IUUC-Gac-041580	Gasterosteus aculeatus	43.04	5.00e-65	241.00
IUUC-Ggo-045034	Gorilla gorilla	47.84	3.00e-72	266.00
IUUC-Hsa-046624	Homo sapiens	49.87	1.00e-80	293.00
IUUC-Itr-048288	Ictidomys tridecemlineatus	41.67	5.00e-56	212.00
IUUC-Lpe-051444	Leersia perrieri	27.54	1.60e+00	27.30
IUUC-Loc-052185	Lepisosteus oculatus	43.65	1.00e-73	270.00
IUUC-Laf-054079	Loxodonta africana	46.81	4.00e-77	281.00
IUUC-Mcc-055674	Macaca mulatta	50.38	5.00e-76	278.00
IUUC-Mga-060203	Meleagris gallopavo	48.11	2.00e-66	246.00
IUUC-Mmr-061492	Microcebus murinus	49.38	6.00e-78	285.00
IUUC-Mdo-063051	Monodelphis domestica	49.49	1.00e-78	287.00
IUUC-Mmu-063409	Mus musculus	47.16	8.00e-80	291.00
IUUC-Mpu-065907	Mustela putorius furo	44.08	3.00e-65	242.00
IUUC-Mlu-066957	Myotis lucifugus	49.10	1.00e-74	273.00
IUUC-Nle-069973	Nomascus leucogenys	49.62	7.00e-80	291.00
IUUC-Opr-071049	Ochotona princeps	44.91	8.00e-61	228.00
IUUC-Ont-071915	Oreochromis niloticus	42.75	4.00e-61	228.00
IUUC-Oan-072965	Ornithorhynchus anatinus	48.23	3.00e-79	288.00
IUUC-Ocu-074029	Oryctolagus cuniculus	38.32	3.00e-49	189.00
IUUC-Ola-087019	Oryzias latipes	40.62	2.00e-57	216.00
IUUC-Oga-088613	Otolemur garnettii	49.01	1.00e-76	280.00
IUUC-Oar-090386	Ovis aries	50.00	4.00e-77	281.00
IUUC-Ptr-091619	Pan troglodytes	49.62	2.00e-79	289.00
IUUC-Pan-092178	Papio anubis	49.12	5.00e-76	278.00
IUUC-Psi-093214	Pelodiscus sinensis	48.08	9.00e-75	274.00
IUUC-Pfo-096901	Poecilia formosa	39.74	7.00e-49	188.00
IUUC-Pab-097560	Pongo abelii	41.24	5.00e-48	185.00
IUUC-Pca-100853	Procavia capensis	45.34	8.00e-50	191.00
IUUC-Pva-102255	Pteropus vampyrus	48.85	6.00e-65	241.00
IUUC-Rno-105812	Rattus norvegicus	47.49	5.00e-76	278.00
IUUC-Sha-107225	Sarcophilus harrisii	54.03	6.00e-46	177.00
IUUC-Sar-113736	Sorex araneus	51.21	8.00e-39	154.00
IUUC-Ssc-115422	Sus scrofa	49.38	4.00e-74	271.00
IUUC-Tgu-116924	Taeniopygia guttata	46.43	3.00e-66	245.00
IUUC-Tru-117695	Takifugu rubripes	37.41	2.00e-52	199.00
IUUC-Tsy-119090	Tarsius syrichta	48.92	1.00e-71	263.00
IUUC-Tni-120645	Tetraodon nigroviridis	37.17	3.00e-49	189.00
IUUC-Ttr-129244	Tursiops truncatus	48.99	4.00e-68	252.00
IUUC-Vpa-130313	Vicugna pacos	47.55	9.00e-63	234.00
IUUC-Xtr-132115	Xenopus tropicalis	40.15	6.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence