iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126239

Ensembl Protein ID

TRIUR3_22478-P1

UniProt Accession

M7ZMP5; M7ZMP5_TRIUA

Genbank Protein ID

EMS60926.1

Protein Name

Chromatin assembly factor 1 subunit B

Genbank Nucleotide ID

KD103516

Gene Name

TRIUR3_22478

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_22478	TRIUR3_22478-T1	TRIUR3_22478-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-22	78.4	163	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H  +v +l++ sd  +lvs+s D+++ +WD  +gv
   Q: 163  HRKDVLDLQWsSDgSYLVSASVDNSCIIWDANKGV 197
           8889*******999****************87776 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKINRQPEAE SAFGGSGSKV ARPVPSIFPP SPNPSLRGDF RSIPPEKKTT ERMRGGTVQI 60
NWHDLQPVLT LDFHPVSRRL ATGGGDHDIK IWAIASDESE EKLPTASYVS SLSSHSSAVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAATAA ATAGGCAACC GGAAGCAGGT AGTGGGCCGT AATCTAGCCC ACTCGCCGCT 60
TCCACAAGCG GCCCAGCATC AACTGCCCTT CTCTCTCTTC TTCTCCCCAC TAGAGTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001632--Gprotein_B
IPR023302--Pept_S9A_N
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	98.52	0.00e+00	1013.00
IUUC-Aml-001755	Ailuropoda melanoleuca	39.31	7.00e-80	290.00
IUUC-Atr-002674	Amborella trichopoda	57.65	4.00e-160	556.00
IUUC-Apl-003701	Anas platyrhynchos	40.35	9.00e-83	300.00
IUUC-Aca-004692	Anolis carolinensis	37.92	3.00e-85	308.00
IUUC-Aly-006286	Arabidopsis lyrata	56.03	2.00e-162	564.00
IUUC-Ath-007683	Arabidopsis thaliana	57.17	8.00e-164	569.00
IUUC-Ago-007940	Ashbya gossypii	35.45	7.00e-60	223.00
IUUC-Afl-008414	Aspergillus flavus	39.59	4.00e-35	142.00
IUUC-Ani-009399	Aspergillus nidulans	38.07	2.00e-33	136.00
IUUC-Aor-009937	Aspergillus oryzae	39.59	3.00e-35	142.00
IUUC-Ame-011094	Astyanax mexicanus	39.75	2.00e-86	312.00
IUUC-Bgr-012005	Blumeria graminis	33.46	1.00e-36	147.00
IUUC-Bta-013423	Bos taurus	38.54	3.00e-80	291.00
IUUC-Bdi-014860	Brachypodium distachyon	86.08	0.00e+00	832.00
IUUC-Bol-016603	Brassica oleracea	55.29	1.00e-158	551.00
IUUC-Bra-017175	Brassica rapa	56.46	2.00e-155	541.00
IUUC-Cel-018272	Caenorhabditis elegans	29.29	9.00e-37	147.00
IUUC-Cja-019558	Callithrix jacchus	40.25	5.00e-82	297.00
IUUC-Cfa-020900	Canis familiaris	39.47	1.00e-78	286.00
IUUC-Cpo-022054	Cavia porcellus	39.04	6.00e-70	257.00
IUUC-Csa-023850	Chlorocebus sabaeus	40.55	2.00e-83	301.00
IUUC-Cho-024510	Choloepus hoffmanni	29.07	3.00e-40	158.00
IUUC-Cin-025178	Ciona intestinalis	37.69	3.00e-72	265.00
IUUC-Cme-027136	Cyanidioschyzon merolae	32.77	2.00e-58	218.00
IUUC-Dre-027879	Danio rerio	39.60	3.00e-86	311.00
IUUC-Dno-029335	Dasypus novemcinctus	40.10	5.00e-83	301.00
IUUC-Dor-030520	Dipodomys ordii	30.23	3.00e-52	198.00
IUUC-Dme-031838	Drosophila melanogaster	38.96	2.00e-76	279.00
IUUC-Eca-033563	Equus caballus	39.80	3.00e-82	298.00
IUUC-Fca-036052	Felis catus	40.10	2.00e-82	298.00
IUUC-Fal-037080	Ficedula albicollis	41.09	6.00e-86	310.00
IUUC-Fso-038115	Fusarium solani	40.82	1.00e-34	140.00
IUUC-Gmo-039461	Gadus morhua	41.75	1.00e-68	252.00
IUUC-Gga-041133	Gallus gallus	40.84	4.00e-84	304.00
IUUC-Gac-041769	Gasterosteus aculeatus	40.84	6.00e-84	303.00
IUUC-Gma-043339	Glycine max	64.65	7.00e-154	536.00
IUUC-Ggo-044561	Gorilla gorilla	39.80	6.00e-83	300.00
IUUC-Hsa-046150	Homo sapiens	40.30	4.00e-83	301.00
IUUC-Hvu-047792	Hordeum vulgare	96.31	1.00e-152	531.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	40.59	9.00e-83	300.00
IUUC-Kpa-049397	Komagataella pastoris	37.31	2.00e-65	241.00
IUUC-Lch-050365	Latimeria chalumnae	34.58	1.00e-54	206.00
IUUC-Lpe-050875	Leersia perrieri	79.76	0.00e+00	796.00
IUUC-Loc-052770	Lepisosteus oculatus	39.95	5.00e-86	311.00
IUUC-Laf-053505	Loxodonta africana	40.84	1.00e-83	302.00
IUUC-Mcc-054803	Macaca mulatta	40.55	2.00e-83	301.00
IUUC-Meu-056578	Macropus eugenii	41.24	7.00e-35	140.00
IUUC-Mpo-057411	Magnaporthe poae	37.39	2.00e-34	140.00
IUUC-Mtr-058066	Medicago truncatula	64.99	4.00e-153	533.00
IUUC-Mga-059735	Meleagris gallopavo	41.09	2.00e-84	305.00
IUUC-Mmr-061343	Microcebus murinus	40.05	1.00e-82	299.00
IUUC-Mdo-062065	Monodelphis domestica	41.15	8.00e-83	300.00
IUUC-Mmu-063501	Mus musculus	40.35	3.00e-81	295.00
IUUC-Mac-064864	Musa acuminata	66.82	3.00e-172	597.00
IUUC-Mpu-066549	Mustela putorius furo	40.15	2.00e-83	302.00
IUUC-Mlu-067121	Myotis lucifugus	40.90	2.00e-82	298.00
IUUC-Nle-069854	Nomascus leucogenys	40.30	2.00e-82	299.00
IUUC-Opr-070803	Ochotona princeps	34.62	2.00e-70	258.00
IUUC-Ont-071642	Oreochromis niloticus	40.35	7.00e-86	310.00
IUUC-Oan-073675	Ornithorhynchus anatinus	40.45	4.00e-84	304.00
IUUC-Ocu-073863	Oryctolagus cuniculus	39.95	4.00e-81	293.00
IUUC-Oba-075682	Oryza barthii	77.82	0.00e+00	762.00
IUUC-Obr-076039	Oryza brachyantha	80.36	0.00e+00	772.00
IUUC-Ogu-078021	Oryza glumaepatula	79.80	0.00e+00	789.00
IUUC-Oin-079908	Oryza indica	66.98	0.00e+00	638.00
IUUC-Olo-081063	Oryza longistaminata	79.41	0.00e+00	783.00
IUUC-Ome-081930	Oryza meridionalis	79.41	0.00e+00	783.00
IUUC-Oni-082547	Oryza nivara	79.41	0.00e+00	784.00
IUUC-Opu-084089	Oryza punctata	77.80	0.00e+00	769.00
IUUC-Oru-084844	Oryza rufipogon	79.60	0.00e+00	787.00
IUUC-Osa-085582	Oryza sativa	79.60	0.00e+00	787.00
IUUC-Ola-087187	Oryzias latipes	40.10	8.00e-86	310.00
IUUC-Olu-087792	Ostreococcus lucimarinus	38.89	2.00e-73	268.00
IUUC-Oga-088390	Otolemur garnettii	39.80	1.00e-81	296.00
IUUC-Oar-089740	Ovis aries	38.56	8.00e-76	276.00
IUUC-Ptr-091581	Pan troglodytes	40.30	5.00e-83	300.00
IUUC-Pan-092258	Papio anubis	37.25	2.00e-72	265.00
IUUC-Psi-093761	Pelodiscus sinensis	38.33	1.00e-83	303.00
IUUC-Ppa-095428	Physcomitrella patens	53.06	2.00e-117	415.00
IUUC-Pfo-097357	Poecilia formosa	40.59	6.00e-87	313.00
IUUC-Pab-098520	Pongo abelii	40.30	3.00e-82	298.00
IUUC-Pop-099331	Populus trichocarpa	58.88	8.00e-164	568.00
IUUC-Ppe-101548	Prunus persica	54.87	1.00e-163	568.00
IUUC-Pva-103243	Pteropus vampyrus	42.38	8.00e-76	276.00
IUUC-Rno-105202	Rattus norvegicus	39.85	9.00e-82	296.00
IUUC-Sce-106250	Saccharomyces cerevisiae	34.38	1.00e-61	229.00
IUUC-Sha-107036	Sarcophilus harrisii	39.90	1.00e-82	299.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	37.71	8.00e-71	259.00
IUUC-Spo-108050	Schizosaccharomyces pombe	35.73	7.00e-64	237.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.44	2.00e-32	133.00
IUUC-Sit-109838	Setaria italica	78.30	0.00e+00	793.00
IUUC-Sly-110872	Solanum lycopersicum	60.92	2.00e-155	541.00
IUUC-Stu-111933	Solanum tuberosum	55.17	1.00e-154	538.00
IUUC-Sbi-114587	Sorghum bicolor	73.96	0.00e+00	746.00
IUUC-Ssc-115462	Sus scrofa	40.10	5.00e-82	297.00
IUUC-Tgu-117186	Taeniopygia guttata	40.84	2.00e-85	308.00
IUUC-Tru-118310	Takifugu rubripes	38.65	4.00e-86	311.00
IUUC-Tsy-118927	Tarsius syrichta	37.01	3.00e-51	195.00
IUUC-Tni-120832	Tetraodon nigroviridis	39.71	6.00e-84	304.00
IUUC-Tca-121584	Theobroma cacao	58.66	9.00e-171	592.00
IUUC-Tae-123476	Triticum aestivum	99.80	0.00e+00	974.00
IUUC-Tme-127108	Tuber melanosporum	36.08	1.00e-64	240.00
IUUC-Ttr-129010	Tursiops truncatus	40.76	7.00e-82	296.00
IUUC-Vpa-130374	Vicugna pacos	38.27	2.00e-22	99.40
IUUC-Vvi-131136	Vitis vinifera	68.56	3.00e-161	560.00
IUUC-Xtr-132141	Xenopus tropicalis	37.50	2.00e-85	308.00
IUUC-Xma-133980	Xiphophorus maculatus	40.10	9.00e-86	310.00
IUUC-Yli-134457	Yarrowia lipolytica	34.26	2.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence