iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019406

Ensembl Protein ID

ENSCJAP00000036551.2

UniProt Accession

F7G0H7; F7G0H7_CALJA

Genbank Protein ID

ENSCJAP00000036551

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01104897

Gene Name

SLX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000019684.2	ENSCJAT00000038607.2	ENSCJAP00000036551.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	3.60e-11	44.0	290	315

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm...vdqtdfeeHlDeCl 24
           ++C++Cqk    +++t++e+H+++Cl
   Q: 290  FFCQICQKNlsaMNVTRREQHVNRCL 315
           89***********************8 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

VSVNEAELGL GSLSHLSTCP WIDPHSSEDQ PESLKTGQMM DESDEDFKEL CASFFQRVKK 60
RGTKEVSGER KAQRAASNGT QIRSKLKRTK QTATKSKTLQ RPAEKKPPSG SQASRAKKQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGAGTGTGA ATGAGGCTGA GCTAGGCTTA GGTTCACTTT CTCATCTATC TACATGTCCC 60
TGGATTGACC CTCACTCCCC TCTGAAGACC AGCCTGAAAG CCTTAAAACT GGTCAGATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	61.44	0.00e+00	1387.00
IUUC-Apl-003261	Anas platyrhynchos	35.01	6.00e-163	568.00
IUUC-Aca-004455	Anolis carolinensis	61.40	2.00e-16	76.60
IUUC-Acl-008026	Aspergillus clavatus	25.51	1.00e-02	35.80
IUUC-Ame-010993	Astyanax mexicanus	36.70	7.00e-10	57.00
IUUC-Bta-013472	Bos taurus	59.42	0.00e+00	1481.00
IUUC-Cel-018663	Caenorhabditis elegans	38.64	4.00e-03	36.60
IUUC-Cfa-020129	Canis familiaris	60.43	0.00e+00	1477.00
IUUC-Cpo-021944	Cavia porcellus	56.04	0.00e+00	1312.00
IUUC-Csa-023941	Chlorocebus sabaeus	81.28	0.00e+00	1165.00
IUUC-Cho-024847	Choloepus hoffmanni	69.22	5.00e-170	592.00
IUUC-Cin-025405	Ciona intestinalis	39.06	2.00e-07	50.10
IUUC-Csv-025916	Ciona savignyi	40.68	1.00e-08	53.10
IUUC-Dre-027764	Danio rerio	32.56	7.00e-85	309.00
IUUC-Dno-030083	Dasypus novemcinctus	63.17	0.00e+00	846.00
IUUC-Dor-031129	Dipodomys ordii	52.04	0.00e+00	1055.00
IUUC-Dse-031510	Dothistroma septosporum	38.89	1.70e-01	32.00
IUUC-Ete-032536	Echinops telfairi	44.62	1.00e-106	381.00
IUUC-Eca-033407	Equus caballus	63.14	0.00e+00	1387.00
IUUC-Eeu-034473	Erinaceus europaeus	49.15	8.00e-51	196.00
IUUC-Fca-035730	Felis catus	60.10	0.00e+00	1447.00
IUUC-Fal-036850	Ficedula albicollis	41.50	1.00e-138	488.00
IUUC-Gmo-038677	Gadus morhua	43.78	3.00e-32	133.00
IUUC-Gga-041088	Gallus gallus	41.69	6.00e-135	476.00
IUUC-Gac-041824	Gasterosteus aculeatus	76.32	1.00e-12	66.60
IUUC-Ggo-045642	Gorilla gorilla	84.35	0.00e+00	2089.00
IUUC-Hsa-047035	Homo sapiens	84.43	0.00e+00	2482.00
IUUC-Hvu-047552	Hordeum vulgare	31.53	2.00e-05	43.10
IUUC-Itr-049010	Ictidomys tridecemlineatus	63.79	0.00e+00	1702.00
IUUC-Kpa-049328	Komagataella pastoris	29.23	3.00e-04	40.40
IUUC-Lch-050364	Latimeria chalumnae	43.38	2.00e-75	278.00
IUUC-Loc-052423	Lepisosteus oculatus	43.35	5.00e-51	197.00
IUUC-Laf-053910	Loxodonta africana	56.40	0.00e+00	1361.00
IUUC-Mcc-055883	Macaca mulatta	82.77	0.00e+00	2476.00
IUUC-Meu-056224	Macropus eugenii	51.42	6.00e-96	346.00
IUUC-Mga-059880	Meleagris gallopavo	45.52	6.00e-133	469.00
IUUC-Mvi-060510	Microbotryum violaceum	32.73	1.00e-03	39.30
IUUC-Mmr-061715	Microcebus murinus	69.43	0.00e+00	1968.00
IUUC-Mdo-062426	Monodelphis domestica	42.50	0.00e+00	765.00
IUUC-Mmu-063947	Mus musculus	56.50	0.00e+00	1400.00
IUUC-Mpu-066184	Mustela putorius furo	66.07	0.00e+00	985.00
IUUC-Mlu-067533	Myotis lucifugus	62.99	0.00e+00	1483.00
IUUC-Nle-069204	Nomascus leucogenys	84.48	0.00e+00	2498.00
IUUC-Opr-070377	Ochotona princeps	63.31	0.00e+00	901.00
IUUC-Ont-072551	Oreochromis niloticus	31.40	5.00e-69	256.00
IUUC-Oan-073350	Ornithorhynchus anatinus	50.47	5.00e-112	397.00
IUUC-Ocu-074915	Oryctolagus cuniculus	65.87	0.00e+00	911.00
IUUC-Ola-087360	Oryzias latipes	35.02	2.00e-27	115.00
IUUC-Oga-089106	Otolemur garnettii	61.34	0.00e+00	1331.00
IUUC-Oar-089289	Ovis aries	59.09	0.00e+00	1011.00
IUUC-Ptr-091469	Pan troglodytes	84.43	0.00e+00	2466.00
IUUC-Pan-091841	Papio anubis	82.76	0.00e+00	1927.00
IUUC-Psi-093842	Pelodiscus sinensis	46.99	9.00e-130	459.00
IUUC-Pma-094732	Petromyzon marinus	45.07	3.00e-08	51.60
IUUC-Pfo-097299	Poecilia formosa	38.25	8.00e-33	136.00
IUUC-Pab-098271	Pongo abelii	84.54	0.00e+00	2464.00
IUUC-Pca-100721	Procavia capensis	55.66	0.00e+00	926.00
IUUC-Pva-102276	Pteropus vampyrus	64.84	0.00e+00	1695.00
IUUC-Rno-105619	Rattus norvegicus	57.99	0.00e+00	1499.00
IUUC-Sha-106722	Sarcophilus harrisii	45.71	0.00e+00	1034.00
IUUC-Sar-113673	Sorex araneus	42.56	6.00e-94	339.00
IUUC-Sre-115039	Sporisorium reilianum	34.92	9.00e-06	44.30
IUUC-Ssc-115383	Sus scrofa	58.87	0.00e+00	1191.00
IUUC-Tgu-117243	Taeniopygia guttata	49.13	2.00e-92	332.00
IUUC-Tru-118092	Takifugu rubripes	39.30	6.00e-27	114.00
IUUC-Tsy-119362	Tarsius syrichta	67.08	0.00e+00	730.00
IUUC-Tni-120380	Tetraodon nigroviridis	75.51	2.00e-17	82.40
IUUC-Tbe-127404	Tupaia belangeri	50.56	0.00e+00	715.00
IUUC-Ttr-128317	Tursiops truncatus	65.06	0.00e+00	1612.00
IUUC-Uma-129640	Ustilago maydis	32.79	3.00e-04	39.70
IUUC-Xtr-132533	Xenopus tropicalis	37.26	2.00e-90	328.00
IUUC-Xma-134059	Xiphophorus maculatus	38.50	5.00e-34	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence