iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016734

Ensembl Protein ID

Bra013533.1-P

UniProt Accession

M4DAM3; M4DAM3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013533	Bra013533.1	Bra013533.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-15	57.4	226	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGs.dDgtikvWDlrtg 33
           g++++vt ++f  d ++l +G+  D  i +WD+r+ 
   Q: 226  GQEGGVTHVQFsKDgNYLYTGGrKDPYILCWDMRKS 261
           57889*******777*****99899*******9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRFDVSPYRT HHFSKQFRAS RNPNNFLKGL KWSPDGSCFL ASSEDNTLTL FYLPQDGGDS 60
NGYGVTIPEE DSYGASLVVN EGESVYDFCW YPYMSVSDPL TCVFATTTRD HPIHLWDSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGATTCG ATGTCTCTCC TTACAGAACA CACCATTTCT CCAAGCAGTT CAGGGCCTCT 60
CGGAACCCTA ACAATTTCCT CAAGGGTCTT AAATGGTTAC CCTTTCTCCG ACTCTCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000305	Aegilops tauschii	69.43	2.00e-131	461.00
IUUC-Aml-001893	Ailuropoda melanoleuca	42.24	2.00e-77	283.00
IUUC-Atr-002472	Amborella trichopoda	63.68	2.00e-151	528.00
IUUC-Aca-004937	Anolis carolinensis	42.81	1.00e-74	273.00
IUUC-Aly-006492	Arabidopsis lyrata	90.75	0.00e+00	748.00
IUUC-Ath-006592	Arabidopsis thaliana	91.69	0.00e+00	761.00
IUUC-Acl-008296	Aspergillus clavatus	27.78	4.00e-17	81.30
IUUC-Ani-009149	Aspergillus nidulans	28.37	6.00e-25	108.00
IUUC-Aor-009938	Aspergillus oryzae	25.52	6.00e-23	101.00
IUUC-Ate-010481	Aspergillus terreus	27.86	5.00e-33	135.00
IUUC-Ame-011296	Astyanax mexicanus	44.64	1.00e-72	266.00
IUUC-Bgr-012232	Blumeria graminis	25.36	7.00e-17	81.30
IUUC-Bta-012362	Bos taurus	41.04	1.00e-76	280.00
IUUC-Bdi-014971	Brachypodium distachyon	66.93	5.00e-153	533.00
IUUC-Bol-016557	Brassica oleracea	95.50	0.00e+00	793.00
IUUC-Cja-019681	Callithrix jacchus	41.62	3.00e-74	272.00
IUUC-Cfa-020148	Canis familiaris	41.74	2.00e-76	279.00
IUUC-Cpo-022128	Cavia porcellus	41.74	1.00e-77	283.00
IUUC-Cre-022680	Chlamydomonas reinhardtii	49.54	5.00e-82	297.00
IUUC-Csa-023779	Chlorocebus sabaeus	42.30	2.00e-74	273.00
IUUC-Cin-025318	Ciona intestinalis	37.54	9.00e-53	200.00
IUUC-Cne-026778	Cryptococcus neoformans	29.91	8.00e-36	144.00
IUUC-Dre-027809	Danio rerio	42.73	2.00e-77	282.00
IUUC-Dno-028896	Dasypus novemcinctus	41.81	8.00e-65	240.00
IUUC-Dor-030656	Dipodomys ordii	40.42	2.00e-64	239.00
IUUC-Dme-031828	Drosophila melanogaster	33.05	2.00e-49	189.00
IUUC-Eca-033305	Equus caballus	42.36	6.00e-79	287.00
IUUC-Eeu-034936	Erinaceus europaeus	39.78	3.00e-32	132.00
IUUC-Fca-036371	Felis catus	41.13	1.00e-77	283.00
IUUC-Gmo-039283	Gadus morhua	44.49	1.00e-52	198.00
IUUC-Gac-042297	Gasterosteus aculeatus	44.49	4.00e-52	197.00
IUUC-Gma-044331	Glycine max	67.17	2.00e-160	558.00
IUUC-Ggo-044938	Gorilla gorilla	42.81	1.00e-76	280.00
IUUC-Hsa-046795	Homo sapiens	42.81	9.00e-77	280.00
IUUC-Itr-048964	Ictidomys tridecemlineatus	41.79	4.00e-77	281.00
IUUC-Lch-050551	Latimeria chalumnae	36.09	9.00e-48	184.00
IUUC-Lpe-051458	Leersia perrieri	65.42	5.00e-136	477.00
IUUC-Loc-052833	Lepisosteus oculatus	46.62	1.00e-69	256.00
IUUC-Laf-054404	Loxodonta africana	42.69	4.00e-68	252.00
IUUC-Mcc-055500	Macaca mulatta	42.22	5.00e-75	275.00
IUUC-Meu-056062	Macropus eugenii	40.96	9.00e-11	61.60
IUUC-Mtr-058157	Medicago truncatula	72.83	1.00e-166	578.00
IUUC-Mla-058898	Melampsora laricipopulina	32.51	1.00e-36	146.00
IUUC-Mvi-060351	Microbotryum violaceum	29.18	9.00e-35	140.00
IUUC-Mmr-061204	Microcebus murinus	41.67	1.00e-76	280.00
IUUC-Mdo-062997	Monodelphis domestica	42.46	1.00e-69	256.00
IUUC-Mmu-063379	Mus musculus	41.09	7.00e-76	277.00
IUUC-Mac-065509	Musa acuminata	66.76	1.00e-155	544.00
IUUC-Mpu-066898	Mustela putorius furo	41.57	3.00e-76	279.00
IUUC-Mlu-067405	Myotis lucifugus	41.89	2.00e-73	269.00
IUUC-Nle-069679	Nomascus leucogenys	36.53	6.00e-56	211.00
IUUC-Opr-070544	Ochotona princeps	38.25	3.00e-34	139.00
IUUC-Oan-073233	Ornithorhynchus anatinus	33.69	2.00e-38	152.00
IUUC-Ocu-074700	Oryctolagus cuniculus	41.57	6.00e-75	274.00
IUUC-Oba-075164	Oryza barthii	60.76	2.00e-143	505.00
IUUC-Ogl-077700	Oryza glaberrima	67.04	4.00e-149	524.00
IUUC-Ogu-078612	Oryza glumaepatula	50.56	2.00e-96	349.00
IUUC-Oin-079494	Oryza indica	66.67	1.00e-147	515.00
IUUC-Olo-081051	Oryza longistaminata	73.67	3.00e-129	453.00
IUUC-Ome-081868	Oryza meridionalis	55.56	3.00e-115	411.00
IUUC-Oni-082904	Oryza nivara	66.85	4.00e-149	524.00
IUUC-Opu-084082	Oryza punctata	68.08	4.00e-149	523.00
IUUC-Oru-084683	Oryza rufipogon	65.85	2.00e-146	511.00
IUUC-Osa-085518	Oryza sativa	66.22	4.00e-151	527.00
IUUC-Ola-086492	Oryzias latipes	47.62	1.00e-29	122.00
IUUC-Oga-088207	Otolemur garnettii	40.38	1.00e-75	276.00
IUUC-Oar-089463	Ovis aries	41.99	4.00e-75	275.00
IUUC-Ptr-090994	Pan troglodytes	42.81	1.00e-76	280.00
IUUC-Pan-091793	Papio anubis	41.99	3.00e-74	272.00
IUUC-Psi-093816	Pelodiscus sinensis	43.06	2.00e-76	279.00
IUUC-Ppa-095348	Physcomitrella patens	61.33	6.00e-142	496.00
IUUC-Pfo-096740	Poecilia formosa	44.05	4.00e-79	288.00
IUUC-Pab-098447	Pongo abelii	41.90	7.00e-64	237.00
IUUC-Pop-099065	Populus trichocarpa	73.71	6.00e-171	593.00
IUUC-Pca-101130	Procavia capensis	41.83	1.00e-69	256.00
IUUC-Ppe-101669	Prunus persica	74.31	2.00e-168	584.00
IUUC-Pva-102685	Pteropus vampyrus	41.88	3.00e-23	103.00
IUUC-Pgr-103262	Puccinia graminis	34.95	2.00e-50	192.00
IUUC-Ptt-103932	Puccinia triticina	33.45	1.00e-42	166.00
IUUC-Pte-104073	Pyrenophora teres	21.26	6.00e-10	58.90
IUUC-Rno-105017	Rattus norvegicus	41.52	4.00e-76	278.00
IUUC-Sha-107405	Sarcophilus harrisii	40.00	7.00e-76	277.00
IUUC-Sja-107997	Schizosaccharomyces japonicus	23.87	7.00e-15	74.70
IUUC-Spo-108316	Schizosaccharomyces pombe	30.45	3.00e-31	128.00
IUUC-Smo-108985	Selaginella moellendorffii	54.67	4.00e-127	447.00
IUUC-Sit-109820	Setaria italica	67.02	2.00e-151	528.00
IUUC-Sly-110899	Solanum lycopersicum	70.29	3.00e-160	557.00
IUUC-Stu-112753	Solanum tuberosum	70.73	7.00e-160	556.00
IUUC-Sar-113155	Sorex araneus	40.42	9.00e-71	260.00
IUUC-Sbi-114408	Sorghum bicolor	66.94	3.00e-146	511.00
IUUC-Sre-115186	Sporisorium reilianum	25.69	2.00e-29	123.00
IUUC-Ssc-116125	Sus scrofa	41.99	6.00e-76	278.00
IUUC-Tru-117888	Takifugu rubripes	44.57	5.00e-82	297.00
IUUC-Tsy-119064	Tarsius syrichta	38.03	1.00e-56	213.00
IUUC-Tni-120323	Tetraodon nigroviridis	44.58	6.00e-80	290.00
IUUC-Tca-121784	Theobroma cacao	74.53	3.00e-174	603.00
IUUC-Tae-123366	Triticum aestivum	67.02	6.00e-152	530.00
IUUC-Tur-126046	Triticum urartu	67.94	6.00e-130	456.00
IUUC-Tbe-127406	Tupaia belangeri	39.25	1.00e-34	140.00
IUUC-Ttr-128268	Tursiops truncatus	41.69	4.00e-75	275.00
IUUC-Vpa-130534	Vicugna pacos	39.67	1.00e-48	186.00
IUUC-Vvi-131612	Vitis vinifera	73.07	2.00e-165	576.00
IUUC-Xtr-132969	Xenopus tropicalis	40.40	1.00e-73	269.00
IUUC-Xma-134075	Xiphophorus maculatus	44.64	3.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence