iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH + +++l++  +d++lv++s Dgt +vW 
   Q: 503  GHLNIIYDLDWskDDRYLVTSSSDGTARVWK 533
           79999*******666***************7 PP

UBD/SH3

   S: 6    vqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
           v +lydy+a+ +deLt+++Gd+++v    + +e+W++g +  +g++G+fP+n v+
   Q: 908  VVALYDYTASRSDELTIHRGDIIRVF--FKDNEDWWYG-SLGKGQEGFFPANHVA 959
           899**********************9..8999******.799**********996 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEQETPEKVD SAQEKVRGKS QPADDSEDSR EKAGTEGTGE LTEAYELQVA EEMAKEIKKK 60
IRRKLKEQLT YFPPDTLLHD DKLGSEKRKK KKKKKVPVPA KPETSPSDVC DSAAEGEQKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCAAG AGACTCCAGA GAAGGTGGAC TCTGCACAGG AGAAGGTCAG AGGCAAGTCC 60
CAGCCAGCAG ATGACTCGGA GGACAGCCGA GAAAAGGCTG GGACAGAAGG GACGGGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001452--SH3_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50002--SH3
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00018--SH3_1
PF00400--WD40

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00320--WD40

Gene Ontology

GO:0005912--C:adherens junction
GO:0005911--C:cell-cell junction
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001943	Ailuropoda melanoleuca	77.47	0.00e+00	1373.00
IUUC-Apl-004057	Anas platyrhynchos	53.46	0.00e+00	999.00
IUUC-Aca-004306	Anolis carolinensis	53.00	0.00e+00	914.00
IUUC-Ame-010981	Astyanax mexicanus	49.35	0.00e+00	828.00
IUUC-Bta-013129	Bos taurus	78.81	0.00e+00	1556.00
IUUC-Cja-018979	Callithrix jacchus	77.11	0.00e+00	1352.00
IUUC-Cfa-020121	Canis familiaris	76.02	0.00e+00	1570.00
IUUC-Cpo-022219	Cavia porcellus	74.83	0.00e+00	1262.00
IUUC-Csa-023991	Chlorocebus sabaeus	77.37	0.00e+00	1614.00
IUUC-Cho-024782	Choloepus hoffmanni	75.73	0.00e+00	761.00
IUUC-Cin-025149	Ciona intestinalis	40.59	1.00e-171	596.00
IUUC-Csv-026188	Ciona savignyi	39.24	2.00e-124	439.00
IUUC-Dre-028737	Danio rerio	49.10	0.00e+00	821.00
IUUC-Dno-029756	Dasypus novemcinctus	75.57	0.00e+00	1457.00
IUUC-Dor-030821	Dipodomys ordii	70.02	0.00e+00	1352.00
IUUC-Ete-032237	Echinops telfairi	71.61	0.00e+00	1448.00
IUUC-Eca-033491	Equus caballus	78.31	0.00e+00	1622.00
IUUC-Eeu-034812	Erinaceus europaeus	66.94	0.00e+00	849.00
IUUC-Fca-035868	Felis catus	74.95	0.00e+00	1559.00
IUUC-Fal-037571	Ficedula albicollis	54.23	0.00e+00	781.00
IUUC-Gmo-039358	Gadus morhua	50.52	0.00e+00	779.00
IUUC-Gga-040233	Gallus gallus	54.11	0.00e+00	949.00
IUUC-Gac-041744	Gasterosteus aculeatus	48.64	0.00e+00	779.00
IUUC-Ggo-044766	Gorilla gorilla	78.02	0.00e+00	1641.00
IUUC-Hsa-046660	Homo sapiens	77.81	0.00e+00	1642.00
IUUC-Itr-048282	Ictidomys tridecemlineatus	81.21	0.00e+00	1695.00
IUUC-Loc-052658	Lepisosteus oculatus	49.27	0.00e+00	886.00
IUUC-Laf-053564	Loxodonta africana	80.49	0.00e+00	1353.00
IUUC-Mcc-055480	Macaca mulatta	77.58	0.00e+00	1635.00
IUUC-Meu-056362	Macropus eugenii	57.31	0.00e+00	796.00
IUUC-Mga-060033	Meleagris gallopavo	53.67	0.00e+00	989.00
IUUC-Mmr-061075	Microcebus murinus	77.92	0.00e+00	1642.00
IUUC-Mdo-062818	Monodelphis domestica	54.21	0.00e+00	1058.00
IUUC-Mmu-063987	Mus musculus	92.37	0.00e+00	1891.00
IUUC-Mpu-066242	Mustela putorius furo	73.81	0.00e+00	1476.00
IUUC-Mlu-067123	Myotis lucifugus	75.02	0.00e+00	1443.00
IUUC-Nle-069793	Nomascus leucogenys	77.92	0.00e+00	1648.00
IUUC-Opr-071110	Ochotona princeps	73.65	0.00e+00	691.00
IUUC-Ont-072179	Oreochromis niloticus	54.01	0.00e+00	752.00
IUUC-Oan-073201	Ornithorhynchus anatinus	61.52	6.00e-129	453.00
IUUC-Ocu-074224	Oryctolagus cuniculus	79.98	0.00e+00	1696.00
IUUC-Ola-086818	Oryzias latipes	53.70	2.00e-71	261.00
IUUC-Oga-088338	Otolemur garnettii	79.92	0.00e+00	1561.00
IUUC-Oar-089247	Ovis aries	75.88	0.00e+00	1577.00
IUUC-Ptr-090830	Pan troglodytes	79.00	0.00e+00	1619.00
IUUC-Pan-092469	Papio anubis	78.40	0.00e+00	1657.00
IUUC-Psi-093183	Pelodiscus sinensis	54.00	0.00e+00	951.00
IUUC-Pma-094415	Petromyzon marinus	47.07	2.00e-157	549.00
IUUC-Pfo-096577	Poecilia formosa	56.83	0.00e+00	747.00
IUUC-Pab-098236	Pongo abelii	79.22	0.00e+00	1408.00
IUUC-Pca-100560	Procavia capensis	64.47	0.00e+00	1196.00
IUUC-Pva-102565	Pteropus vampyrus	86.42	0.00e+00	1150.00
IUUC-Sha-106577	Sarcophilus harrisii	62.78	1.00e-155	542.00
IUUC-Sar-113265	Sorex araneus	65.16	0.00e+00	1284.00
IUUC-Ssc-116174	Sus scrofa	77.86	0.00e+00	1594.00
IUUC-Tgu-116618	Taeniopygia guttata	52.50	0.00e+00	838.00
IUUC-Tru-117761	Takifugu rubripes	42.61	0.00e+00	661.00
IUUC-Tsy-119557	Tarsius syrichta	80.89	0.00e+00	796.00
IUUC-Tni-119782	Tetraodon nigroviridis	49.43	0.00e+00	787.00
IUUC-Tbe-127529	Tupaia belangeri	61.85	9.00e-125	441.00
IUUC-Ttr-128444	Tursiops truncatus	74.57	0.00e+00	1514.00
IUUC-Vpa-130337	Vicugna pacos	68.30	0.00e+00	1337.00
IUUC-Xtr-132055	Xenopus tropicalis	55.63	0.00e+00	716.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence