iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069852

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01033257

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000009373.1	ENSNLET00000011981.1	ENSNLEP00000011421.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-23	80.9	126	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++++l + +++ l++G d g i++WD r+
   Q: 126  HGAPINSLLLvDENVLATGDDTGGIRLWDQRK 157
           999*****77555****************765 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MDRTCEERPA EDASDEEDPD SMEAPTRIRD TPEDIVLEAP ASGLAFHPAR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKACRAV AFSEDGQKLI TVSKDKAIHV LDVEQGRLER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCGCA CTTGTGAGGA GAGGCCCGCT GAGGATGCGA GCGACGAGGA GGACCCAGAC 60
TCCATGGAAG CCCCAACCCG GATCCGGGAC ACTCCGGAAG ACATCGTGCT GGAAGCTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

nle:100604661

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	36.64	1.00e-46	180.00
IUUC-Aml-001768	Ailuropoda melanoleuca	93.99	0.00e+00	743.00
IUUC-Atr-002764	Amborella trichopoda	34.87	2.00e-21	94.70
IUUC-Apl-003880	Anas platyrhynchos	64.69	3.00e-116	412.00
IUUC-Aca-005060	Anolis carolinensis	66.84	3.00e-150	525.00
IUUC-Aly-006484	Arabidopsis lyrata	36.15	6.00e-49	187.00
IUUC-Ath-006652	Arabidopsis thaliana	38.31	3.00e-57	215.00
IUUC-Bta-013497	Bos taurus	93.22	0.00e+00	706.00
IUUC-Bdi-014378	Brachypodium distachyon	38.11	1.00e-55	209.00
IUUC-Bol-016352	Brassica oleracea	38.31	2.00e-58	219.00
IUUC-Bra-017103	Brassica rapa	38.31	9.00e-59	220.00
IUUC-Cel-018192	Caenorhabditis elegans	25.97	7.00e-17	81.30
IUUC-Cja-018792	Callithrix jacchus	95.31	0.00e+00	710.00
IUUC-Cfa-020739	Canis familiaris	93.61	0.00e+00	711.00
IUUC-Cpo-022331	Cavia porcellus	92.17	0.00e+00	703.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	40.96	6.00e-38	149.00
IUUC-Csa-023414	Chlorocebus sabaeus	96.87	0.00e+00	764.00
IUUC-Cho-024600	Choloepus hoffmanni	93.15	0.00e+00	640.00
IUUC-Cin-025565	Ciona intestinalis	38.03	2.00e-61	229.00
IUUC-Csv-026294	Ciona savignyi	39.25	9.00e-61	227.00
IUUC-Cne-026979	Cryptococcus neoformans	33.68	3.00e-40	159.00
IUUC-Cme-027192	Cyanidioschyzon merolae	25.53	5.00e-20	92.00
IUUC-Dre-028492	Danio rerio	63.99	1.00e-128	452.00
IUUC-Dno-030050	Dasypus novemcinctus	89.07	0.00e+00	640.00
IUUC-Dor-030386	Dipodomys ordii	81.54	4.00e-171	593.00
IUUC-Dme-032012	Drosophila melanogaster	34.58	2.00e-60	226.00
IUUC-Ete-032491	Echinops telfairi	88.27	0.00e+00	679.00
IUUC-Eca-033583	Equus caballus	95.04	0.00e+00	723.00
IUUC-Eeu-034976	Erinaceus europaeus	94.48	4.00e-176	610.00
IUUC-Fca-036417	Felis catus	90.34	0.00e+00	687.00
IUUC-Gmo-039505	Gadus morhua	65.48	4.00e-138	484.00
IUUC-Gga-040732	Gallus gallus	70.12	5.00e-145	506.00
IUUC-Gac-041313	Gasterosteus aculeatus	63.69	2.00e-133	468.00
IUUC-Gma-044122	Glycine max	40.00	5.00e-57	214.00
IUUC-Ggo-044748	Gorilla gorilla	98.69	0.00e+00	769.00
IUUC-Hsa-046943	Homo sapiens	98.17	0.00e+00	766.00
IUUC-Hvu-047659	Hordeum vulgare	37.19	9.00e-54	204.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	92.01	0.00e+00	667.00
IUUC-Lch-050331	Latimeria chalumnae	58.50	3.00e-112	397.00
IUUC-Lpe-051193	Leersia perrieri	39.44	3.00e-58	218.00
IUUC-Loc-051946	Lepisosteus oculatus	65.98	9.00e-133	467.00
IUUC-Laf-054035	Loxodonta africana	91.44	0.00e+00	680.00
IUUC-Mcc-055285	Macaca mulatta	97.30	2.00e-104	370.00
IUUC-Meu-056596	Macropus eugenii	84.37	2.00e-170	591.00
IUUC-Mor-056995	Magnaporthe oryzae	24.12	9.00e-12	64.70
IUUC-Mtr-058637	Medicago truncatula	40.07	1.00e-56	213.00
IUUC-Mga-059839	Meleagris gallopavo	67.61	3.00e-96	346.00
IUUC-Mdo-062868	Monodelphis domestica	82.78	4.00e-174	605.00
IUUC-Mmu-064305	Mus musculus	88.53	0.00e+00	676.00
IUUC-Mac-065041	Musa acuminata	38.73	6.00e-57	214.00
IUUC-Mpu-066779	Mustela putorius furo	93.47	0.00e+00	694.00
IUUC-Mlu-067223	Myotis lucifugus	92.82	0.00e+00	670.00
IUUC-Ncr-068919	Neurospora crassa	24.68	5.00e-08	52.40
IUUC-Ont-072452	Oreochromis niloticus	66.07	1.00e-137	482.00
IUUC-Oan-073163	Ornithorhynchus anatinus	82.07	2.00e-65	241.00
IUUC-Ocu-074628	Oryctolagus cuniculus	95.04	0.00e+00	712.00
IUUC-Oba-075868	Oryza barthii	38.73	2.00e-55	209.00
IUUC-Obr-076768	Oryza brachyantha	39.08	5.00e-57	214.00
IUUC-Ogl-077424	Oryza glaberrima	39.44	3.00e-58	218.00
IUUC-Ogu-078847	Oryza glumaepatula	39.08	7.00e-56	210.00
IUUC-Oin-079495	Oryza indica	39.44	3.00e-58	218.00
IUUC-Olo-080268	Oryza longistaminata	39.08	8.00e-56	210.00
IUUC-Ome-081709	Oryza meridionalis	38.85	2.00e-49	189.00
IUUC-Oni-082749	Oryza nivara	39.44	3.00e-58	218.00
IUUC-Opu-084023	Oryza punctata	32.75	6.00e-39	154.00
IUUC-Oru-084764	Oryza rufipogon	39.08	7.00e-56	210.00
IUUC-Osa-086009	Oryza sativa	39.44	4.00e-58	218.00
IUUC-Ola-086463	Oryzias latipes	60.71	2.00e-127	448.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.58	2.00e-42	166.00
IUUC-Oga-089114	Otolemur garnettii	91.69	0.00e+00	708.00
IUUC-Ptr-090556	Pan troglodytes	98.43	0.00e+00	768.00
IUUC-Pan-092828	Papio anubis	97.39	0.00e+00	768.00
IUUC-Psi-093609	Pelodiscus sinensis	73.65	5.00e-121	428.00
IUUC-Pma-094413	Petromyzon marinus	53.26	6.00e-100	357.00
IUUC-Ppa-095422	Physcomitrella patens	37.97	1.00e-64	239.00
IUUC-Pfo-096389	Poecilia formosa	64.58	1.00e-129	456.00
IUUC-Pab-098095	Pongo abelii	98.17	0.00e+00	771.00
IUUC-Pop-099612	Populus trichocarpa	39.22	2.00e-53	202.00
IUUC-Pca-100408	Procavia capensis	91.16	0.00e+00	676.00
IUUC-Ppe-101931	Prunus persica	35.49	5.00e-54	204.00
IUUC-Pva-102549	Pteropus vampyrus	93.39	0.00e+00	698.00
IUUC-Rno-105079	Rattus norvegicus	91.74	0.00e+00	701.00
IUUC-Sha-107299	Sarcophilus harrisii	84.66	8.00e-162	564.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	28.97	5.00e-22	98.60
IUUC-Spo-108122	Schizosaccharomyces pombe	30.53	2.00e-28	119.00
IUUC-Smo-109673	Selaginella moellendorffii	38.81	1.00e-49	190.00
IUUC-Sit-110263	Setaria italica	38.03	2.00e-55	209.00
IUUC-Sly-110988	Solanum lycopersicum	37.10	4.00e-52	198.00
IUUC-Stu-112713	Solanum tuberosum	37.46	5.00e-53	201.00
IUUC-Sbi-114617	Sorghum bicolor	37.32	1.00e-53	202.00
IUUC-Sre-115136	Sporisorium reilianum	30.11	4.00e-13	69.30
IUUC-Ssc-116268	Sus scrofa	92.99	0.00e+00	724.00
IUUC-Tgu-116720	Taeniopygia guttata	61.66	4.00e-89	322.00
IUUC-Tru-117977	Takifugu rubripes	65.48	7.00e-130	456.00
IUUC-Tsy-119121	Tarsius syrichta	92.73	8.00e-119	419.00
IUUC-Tni-119904	Tetraodon nigroviridis	68.15	3.00e-132	464.00
IUUC-Tca-121718	Theobroma cacao	40.28	5.00e-58	218.00
IUUC-Tae-124364	Triticum aestivum	37.54	5.00e-54	204.00
IUUC-Tme-126922	Tuber melanosporum	22.16	1.00e-12	67.80
IUUC-Tbe-127276	Tupaia belangeri	93.60	1.00e-157	548.00
IUUC-Uma-129505	Ustilago maydis	32.52	9.00e-14	71.20
IUUC-Vpa-130276	Vicugna pacos	94.82	2.00e-139	487.00
IUUC-Vvi-131377	Vitis vinifera	39.22	3.00e-56	213.00
IUUC-Xtr-132529	Xenopus tropicalis	68.71	2.00e-145	509.00
IUUC-Xma-134177	Xiphophorus maculatus	64.29	2.00e-122	432.00
IUUC-Yli-134665	Yarrowia lipolytica	23.42	6.00e-07	48.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence