iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088411

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03108053

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000008241.2	ENSOGAT00000008249.2	ENSOGAP00000007382.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-07	30.4	434	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+  +  l+f  +  t+l ++s+D+ i +WD
   Q: 434  HKKAIATLCFspTHeTHLFTASYDKRIILWD 464
           88889999***6447**************** PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MGPLSPQLLM ERGRPKSNRL GKIRSLDLSG LKLLSEHLDP KLLCRLTRLQ ELDLSNNQLE 60
MLPDNLGLSR LRVLRCANNQ LGDVTALCQF PQLEELSLEG NPFLTVNDNL KVSFLLPKLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCCCC TCTCACCGCA GCTGCTGATG GAGCGCGGGC GCCCCAAGAG CAACCGGCTG 60
GGGAAGATCC GGAGCTTGGA GTAAGAACCG GGCCCGGGGC GAGGCTGTGT CCGCGGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	76.60	0.00e+00	1051.00
IUUC-Bta-012858	Bos taurus	75.00	0.00e+00	970.00
IUUC-Cja-019702	Callithrix jacchus	81.16	0.00e+00	1028.00
IUUC-Cfa-020910	Canis familiaris	80.40	0.00e+00	1033.00
IUUC-Cpo-022523	Cavia porcellus	76.19	0.00e+00	1043.00
IUUC-Csa-023359	Chlorocebus sabaeus	81.74	0.00e+00	1070.00
IUUC-Dno-029426	Dasypus novemcinctus	79.94	0.00e+00	1008.00
IUUC-Dor-030654	Dipodomys ordii	82.34	0.00e+00	646.00
IUUC-Eca-034035	Equus caballus	80.58	0.00e+00	1041.00
IUUC-Eeu-034711	Erinaceus europaeus	74.70	2.00e-168	585.00
IUUC-Gmo-039096	Gadus morhua	36.34	2.00e-115	409.00
IUUC-Ggo-044714	Gorilla gorilla	80.87	0.00e+00	1029.00
IUUC-Hsa-046826	Homo sapiens	81.16	0.00e+00	1031.00
IUUC-Laf-054449	Loxodonta africana	80.09	0.00e+00	1036.00
IUUC-Mcc-055193	Macaca mulatta	82.17	0.00e+00	1039.00
IUUC-Mmr-061572	Microcebus murinus	65.87	0.00e+00	833.00
IUUC-Mmu-063240	Mus musculus	71.64	0.00e+00	919.00
IUUC-Mpu-066295	Mustela putorius furo	79.37	0.00e+00	1021.00
IUUC-Mlu-067766	Myotis lucifugus	80.52	0.00e+00	1061.00
IUUC-Nle-069200	Nomascus leucogenys	78.26	0.00e+00	954.00
IUUC-Ola-086965	Oryzias latipes	43.07	2.00e-91	330.00
IUUC-Oar-089415	Ovis aries	75.00	0.00e+00	917.00
IUUC-Ptr-090663	Pan troglodytes	81.01	0.00e+00	1031.00
IUUC-Pan-092467	Papio anubis	81.30	0.00e+00	1025.00
IUUC-Pab-098479	Pongo abelii	81.16	0.00e+00	1032.00
IUUC-Pca-101023	Procavia capensis	68.12	0.00e+00	846.00
IUUC-Pva-102812	Pteropus vampyrus	77.25	0.00e+00	1022.00
IUUC-Rno-105469	Rattus norvegicus	71.92	0.00e+00	944.00
IUUC-Ssc-115884	Sus scrofa	80.64	0.00e+00	1066.00
IUUC-Tbe-127247	Tupaia belangeri	77.11	2.00e-129	455.00
IUUC-Ttr-128723	Tursiops truncatus	80.26	0.00e+00	1041.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence