iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000005972.2	ENSCJAT00000011627.2	ENSCJAP00000011013.2
ENSCJAG00000005972.2	ENSCJAT00000011610.2	ENSCJAP00000010997.2
ENSCJAG00000005972.2	ENSCJAT00000011633.2	ENSCJAP00000011018.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-57	187.4	178	216
UBD/Beta-Prp	2.40e-80	270.9	50	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 178  HINWVRCAKFsPDgRLIVSASDDKTVKLWDKSSRECVHS 216
           999********999****************999888875 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           kg h + +tcv+fs ++++la+gs+d+++ vw +++++   ++ gh+++vt+v+fsp+g++l++gs+D+t+++w ++      ++++h+
   Q: 50   KG-HRDAVTCVDFSIKTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGQLLASGSRDKTVRLWVPNVKGESTSFRAHT 137
           44.45567779999999999999999999999999999999999999999999999999999999999999999777666667889999 PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++v+s++f+ +g+++v++s+d+t++vw ++ ++ l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd ++ ++++   + h + v
   Q: 138  ATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF-SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGSFV 224
           999999999999999999999999999999999998.9999999999999999999999999999999999999999999998.99999 PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvr 216
           + ++f+++g++++++++d+tvk+wd++t + ++
   Q: 225  TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 257
           999999999999999999999999999988776 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RFSLRCRQPR HGCALRGRVL APGNPLPHPG FAHLTLALPQ EDPSLERHFK GHRDAVTCVD 60
FSIKTKQLAS GSMDSCLMVW HMKPQSRAYR FTGHKDAVTC VNFSPSGQLL ASGSRDKTVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGGTGGG GTGAACCCCT CATCCTGGTT CTCTTAATTT CTCAGGCGGA ATGAGTGGCG 60
GCGGACAGAG GCTTTTGGCG GCGCTGTCTG TGGGTTGCCT GGGTTTACGG ATCTGGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	92.27	0.00e+00	758.00
IUUC-Apl-003466	Anas platyrhynchos	75.68	0.00e+00	629.00
IUUC-Aca-004323	Anolis carolinensis	69.61	2.00e-175	608.00
IUUC-Bta-012484	Bos taurus	91.58	0.00e+00	765.00
IUUC-Cfa-020439	Canis familiaris	91.83	0.00e+00	764.00
IUUC-Cpo-021403	Cavia porcellus	88.24	0.00e+00	789.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	50.00	5.00e-108	384.00
IUUC-Csa-023479	Chlorocebus sabaeus	94.35	0.00e+00	694.00
IUUC-Cho-024354	Choloepus hoffmanni	86.82	9.00e-113	399.00
IUUC-Cin-025258	Ciona intestinalis	71.43	8.00e-140	490.00
IUUC-Csv-025955	Ciona savignyi	63.54	4.00e-142	497.00
IUUC-Dno-029467	Dasypus novemcinctus	77.00	1.00e-122	432.00
IUUC-Dor-030399	Dipodomys ordii	88.29	0.00e+00	748.00
IUUC-Dme-032182	Drosophila melanogaster	46.15	9.00e-80	290.00
IUUC-Eca-034425	Equus caballus	92.11	0.00e+00	791.00
IUUC-Eeu-034607	Erinaceus europaeus	79.02	1.00e-179	622.00
IUUC-Fca-035627	Felis catus	88.28	0.00e+00	758.00
IUUC-Fal-037381	Ficedula albicollis	72.55	1.00e-177	615.00
IUUC-Gmo-038489	Gadus morhua	65.62	2.00e-157	548.00
IUUC-Gga-040559	Gallus gallus	72.82	1.00e-173	602.00
IUUC-Gac-041453	Gasterosteus aculeatus	67.80	5.00e-167	580.00
IUUC-Ggo-044773	Gorilla gorilla	95.05	0.00e+00	757.00
IUUC-Hsa-045823	Homo sapiens	95.30	0.00e+00	760.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	91.60	0.00e+00	780.00
IUUC-Lch-050558	Latimeria chalumnae	67.44	9.00e-171	592.00
IUUC-Loc-052836	Lepisosteus oculatus	66.51	4.00e-170	590.00
IUUC-Laf-053974	Loxodonta africana	82.52	0.00e+00	671.00
IUUC-Mcc-055494	Macaca mulatta	92.16	0.00e+00	759.00
IUUC-Meu-056646	Macropus eugenii	73.47	5.00e-126	444.00
IUUC-Mga-059295	Meleagris gallopavo	66.59	9.00e-168	583.00
IUUC-Mmr-061040	Microcebus murinus	92.82	0.00e+00	776.00
IUUC-Mdo-062519	Monodelphis domestica	76.84	8.00e-173	599.00
IUUC-Mmu-063759	Mus musculus	92.67	2.00e-169	588.00
IUUC-Mpu-066442	Mustela putorius furo	92.33	0.00e+00	746.00
IUUC-Mlu-068163	Myotis lucifugus	89.23	0.00e+00	761.00
IUUC-Nle-070160	Nomascus leucogenys	95.30	0.00e+00	764.00
IUUC-Opr-070192	Ochotona princeps	89.60	0.00e+00	665.00
IUUC-Ont-072539	Oreochromis niloticus	70.82	5.00e-146	510.00
IUUC-Oan-072834	Ornithorhynchus anatinus	60.93	3.00e-111	394.00
IUUC-Ocu-074624	Oryctolagus cuniculus	91.13	0.00e+00	704.00
IUUC-Ola-087268	Oryzias latipes	61.97	5.00e-155	540.00
IUUC-Oga-088964	Otolemur garnettii	85.33	0.00e+00	733.00
IUUC-Oar-090202	Ovis aries	91.36	0.00e+00	772.00
IUUC-Ptr-091164	Pan troglodytes	95.06	0.00e+00	761.00
IUUC-Pan-092805	Papio anubis	93.82	0.00e+00	690.00
IUUC-Psi-093359	Pelodiscus sinensis	76.49	3.00e-161	560.00
IUUC-Pma-094425	Petromyzon marinus	62.45	6.00e-160	556.00
IUUC-Ppa-095677	Physcomitrella patens	44.95	1.00e-79	289.00
IUUC-Pfo-096741	Poecilia formosa	72.97	8.00e-138	483.00
IUUC-Pab-098376	Pongo abelii	95.54	0.00e+00	803.00
IUUC-Pca-101122	Procavia capensis	87.80	0.00e+00	738.00
IUUC-Pva-103104	Pteropus vampyrus	71.78	4.00e-162	563.00
IUUC-Rno-105282	Rattus norvegicus	85.79	0.00e+00	649.00
IUUC-Sha-106840	Sarcophilus harrisii	80.43	4.00e-115	407.00
IUUC-Smo-109423	Selaginella moellendorffii	44.13	4.00e-77	281.00
IUUC-Sar-113262	Sorex araneus	63.37	9.00e-140	489.00
IUUC-Ssc-115392	Sus scrofa	90.61	0.00e+00	692.00
IUUC-Tgu-117340	Taeniopygia guttata	71.96	2.00e-172	598.00
IUUC-Tru-117577	Takifugu rubripes	72.19	1.00e-135	476.00
IUUC-Tsy-119404	Tarsius syrichta	84.90	0.00e+00	704.00
IUUC-Tni-120713	Tetraodon nigroviridis	72.73	2.00e-134	472.00
IUUC-Tbe-127788	Tupaia belangeri	72.53	2.00e-154	538.00
IUUC-Ttr-128608	Tursiops truncatus	88.86	0.00e+00	700.00
IUUC-Xtr-132720	Xenopus tropicalis	61.56	4.00e-154	537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence