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Tag Content
iUUCD ID IUUC-Dre-028823
Ensembl Protein ID ENSDARP00000101029.3
UniProt Accession F1RA29; F1RA29_DANRE
Genbank Protein ID ENSDARP00000101029
Protein Name WD repeat domain 90
Genbank Nucleotide ID CU571252
Gene Name wdr90
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000079241.4 ENSDART00000109221.4 ENSDARP00000101029.3
ENSDARG00000079241.4 ENSDART00000165125.1 ENSDARP00000131758.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.80e-33 113.4 1528 1564
UBD/Beta-Prp 1.10e-75 255.5 1387 1703
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+++v+++   +d  ++v+++ Dg+++vW l ++ l
   Q: 1528 GHKSKVNGVVCsPDeQHFVTCGQDGSVRVWTLQSHEL 1564
           8*******9889999***************9987765 PP
   

   UBD/Beta-Prp
   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...... 131
            +aevt+v+++ +  il tg + ++++vwd +t  c++t+++   ++  l  +   + lv+Gs+ + +r+w + + q l++      
   Q: 1387 GQAEVTSVCYNTRN-ILYTGTNSGHVCVWDCNTQRCFVTWEADRGEIGVLVCCG--NMLVTGSNTKKLRLWSVASVQSLSNsdskrs 1470
           4677******9996.********************************9999999..9**********************999***** PP
   S: 132  ......................................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
                                                                 + sgh++ vn+vv +pd++ +v+++ D+ vr+W
   Q: 1471 raqddgtqvqleqellldgtivsaafdkvmdmgivgttagtlwyinwtdstsirLISGHKSKVNGVVCSPDEQHFVTCGQDGSVRVW 1557
           *****************************************************9********************************* PP
   S: 165  dlktgkllrtltgghtdsvyslsfdsng........kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssD 243
            l++ +ll +++   ++s +++ +++ +         ++++g  dgtv++++l + e+  +l+ + d v+ ++fs  ++ l+sg+ D
   Q: 1558 TLQSHELLVQFQV-LNQSCECVCWSPPRgvcgsrgrMCVAAGYSDGTVRIFSLDSAEMELKLQPQPDSVCALQFSHYGDVLLSGARD 1643
           ***********98.*********99988999999989999*********************************************** PP
   S: 244  gsiriWdlrsgdllktlqlhn.ssvisvav.......lsfgdnvl.vlgsedskvniwkl 294
           g+i +    +g  ++t++ h+  s+   ++       +++++n+l +++s+d +v iw+ 
   Q: 1644 GVITVCSPVTGVSIRTITDHRgASINTLQCtskqfkeFGLDGNELwLAVSADRRVSIWAA 1703
           ******9************99766666666565666666667766355566*******85 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MSSKALWQQP YVNIFKHMKI EEWKKVSKEG DVSLYMDKNL KCSVFSIRGS IQASNYILLP 60
KTSSQTLGLT GRYLYLLFKP SPNKHFIVHL DIAAEEGQVI RVSFSNLFKE FKSTATWLQF 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028823|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCGATTATT ACAAACACAA CGAGCTCACA GACCTGCAAA ACTCACAAAA CAACGACAAA 60
AATTGAACAT TATACTCTGT TTGACAATAA ACTAAAGCGT TGTGCTGAAT AAAATATCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028823|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF05018--DUF667
PF00400--WD40
SMART

SM00320--WD40
KEGG dre:100038787
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001801 Ailuropoda melanoleuca 48.77 0.00e+00 943.00
IUUC-Apl-003387 Anas platyrhynchos 51.19 0.00e+00 1689.00
IUUC-Aca-005235 Anolis carolinensis 52.86 0.00e+00 1689.00
IUUC-Ame-011595 Astyanax mexicanus 68.16 0.00e+00 2494.00
IUUC-Bta-012328 Bos taurus 46.17 0.00e+00 1554.00
IUUC-Cja-019058 Callithrix jacchus 49.11 0.00e+00 854.00
IUUC-Cfa-020934 Canis familiaris 45.61 0.00e+00 1499.00
IUUC-Cpo-022025 Cavia porcellus 45.56 0.00e+00 1540.00
IUUC-Cre-022928 Chlamydomonas reinhardtii 28.89 4.00e-71 264.00
IUUC-Csa-023022 Chlorocebus sabaeus 45.73 0.00e+00 1555.00
IUUC-Cin-025133 Ciona intestinalis 36.70 0.00e+00 1209.00
IUUC-Csv-025816 Ciona savignyi 35.36 0.00e+00 1101.00
IUUC-Dno-029211 Dasypus novemcinctus 49.84 0.00e+00 638.00
IUUC-Dor-030211 Dipodomys ordii 47.67 0.00e+00 1410.00
IUUC-Ete-032363 Echinops telfairi 40.23 9.00e-172 597.00
IUUC-Eca-034296 Equus caballus 46.57 0.00e+00 1506.00
IUUC-Eeu-035226 Erinaceus europaeus 42.21 1.00e-179 623.00
IUUC-Fca-035384 Felis catus 48.05 0.00e+00 922.00
IUUC-Fal-037660 Ficedula albicollis 50.48 0.00e+00 1704.00
IUUC-Gga-040666 Gallus gallus 50.41 0.00e+00 1217.00
IUUC-Gac-041358 Gasterosteus aculeatus 56.88 0.00e+00 2010.00
IUUC-Ggo-045121 Gorilla gorilla 46.50 0.00e+00 1584.00
IUUC-Hsa-046289 Homo sapiens 46.35 0.00e+00 1544.00
IUUC-Itr-048485 Ictidomys tridecemlineatus 46.86 0.00e+00 860.00
IUUC-Lch-050009 Latimeria chalumnae 53.83 0.00e+00 1916.00
IUUC-Loc-052629 Lepisosteus oculatus 58.37 0.00e+00 1169.00
IUUC-Mcc-055834 Macaca mulatta 45.16 0.00e+00 882.00
IUUC-Meu-056162 Macropus eugenii 45.99 6.00e-169 588.00
IUUC-Mga-060167 Meleagris gallopavo 49.82 0.00e+00 1579.00
IUUC-Mmr-060761 Microcebus murinus 49.84 2.00e-87 315.00
IUUC-Mdo-061886 Monodelphis domestica 50.43 0.00e+00 1832.00
IUUC-Mmu-063652 Mus musculus 46.80 0.00e+00 1650.00
IUUC-Mlu-068141 Myotis lucifugus 47.11 0.00e+00 1619.00
IUUC-Nle-069133 Nomascus leucogenys 49.09 0.00e+00 934.00
IUUC-Ont-072496 Oreochromis niloticus 59.48 0.00e+00 2193.00
IUUC-Oan-072833 Ornithorhynchus anatinus 45.84 0.00e+00 1515.00
IUUC-Ola-086564 Oryzias latipes 54.24 0.00e+00 1940.00
IUUC-Oga-088919 Otolemur garnettii 45.38 0.00e+00 1547.00
IUUC-Oar-089946 Ovis aries 49.47 0.00e+00 637.00
IUUC-Ptr-090755 Pan troglodytes 47.46 0.00e+00 1291.00
IUUC-Pan-092054 Papio anubis 45.77 0.00e+00 1552.00
IUUC-Psi-093467 Pelodiscus sinensis 54.38 0.00e+00 1934.00
IUUC-Pma-094573 Petromyzon marinus 43.29 0.00e+00 1499.00
IUUC-Pfo-096849 Poecilia formosa 55.18 0.00e+00 1894.00
IUUC-Pab-098320 Pongo abelii 45.64 0.00e+00 1415.00
IUUC-Pca-100172 Procavia capensis 45.05 0.00e+00 1442.00
IUUC-Pva-102772 Pteropus vampyrus 49.14 0.00e+00 939.00
IUUC-Rno-105046 Rattus norvegicus 46.96 0.00e+00 1639.00
IUUC-Sha-107094 Sarcophilus harrisii 50.88 0.00e+00 1878.00
IUUC-Ssc-116257 Sus scrofa 48.43 0.00e+00 907.00
IUUC-Tgu-117323 Taeniopygia guttata 49.73 0.00e+00 1398.00
IUUC-Tru-118717 Takifugu rubripes 54.99 0.00e+00 1944.00
IUUC-Tni-120108 Tetraodon nigroviridis 53.38 0.00e+00 1839.00
IUUC-Ttr-128378 Tursiops truncatus 49.62 0.00e+00 638.00
IUUC-Xtr-131760 Xenopus tropicalis 51.49 0.00e+00 1815.00
Created Date 25-Jun-2017

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