iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050746

Ensembl Protein ID

LPERR11G18400.1

UniProt Accession

A0A0D9XV00; A0A0D9XV00_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR11G18400	LPERR11G18400.1	LPERR11G18400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-37	127.3	244	282
UBD/Beta-Prp	1.10e-51	176.6	28	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtgvllk 37
           gH+++v +++  +d++ +++Gs D t+++WD+ t ++++
   Q: 244  GHASWVLSIDVsPDGMaVATGSSDRTVRLWDINTRTSVQ 282
           8***********99553899***********98877665 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dk 108
           ++ + ll+tg  d+t+++w  ++       +   gh  +v +++ +p g + + +s D  ++v+d+++g  v tl++  ++v+ ++f+p+g   
   Q: 28   HRPTALLLTGALDETVRLWAPDDLAPasaAAPSRGHALGVVSLSAHPAGALAAAVSLDSYVRVFDVDSGASVATLEAPPSEVWGVQFHPKGsAL 121
           566789*************888733355477779*******************************************************99677 PP
   S: 109  lvsGshdrtirvwdletgqclee...........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
            ++G+    +++wd+e+ + + +            ++g  ++v +v+++pdg+ll+ Gs D+t+ ++d  ++k l++l+g h+ +v+s+ f++ 
   Q: 122  AAAGGGSGSVKLWDTEKWKPITSlavprpegarpDKTGSGKFVLSVAWSPDGKLLACGSMDGTIAVYDAVRMKFLHHLEG-HHMPVRSMVFSPV 214
           78899****************99**********98999*****************************************9.************9 PP
   S: 192  gke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav.....lsfgdnv 279
            ++ l ++s+d  + ++d ++++ + ++ gh ++v+s+++sp++  +++gssD+++r+Wd+ +++ ++t+++hn++v++va+      ++    
   Q: 215  DPHvLFTASDDCHIHIYDAKEKSLIGAMSGHASWVLSIDVSPDGMAVATGSSDRTVRLWDINTRTSVQTMSNHNDQVWAVAFrppggTGVRAGR 308
           866156999*************************************************************************777666666888 PP
   S: 280  lvlgsedskvniwkl 294
           l+++s+d+++ ++++
   Q: 309  LASVSDDKSITLYDY 323
           8************98 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MKLAGLKSVD GAHEESIWAA AWVPAAEHRP TALLLTGALD ETVRLWAPDD LAPASAAAPS 60
RGHALGVVSL SAHPAGALAA AVSLDSYVRV FDVDSGASVA TLEAPPSEVW GVQFHPKGSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGGCCTCA ACTCTTACAT CAGTGGACAG TCCCAACTCC CAAGTGCCCA AGCCAACAGA 60
AATTCGGGCC ATTTCAACTA AGCCCATAAG ACCCATAATA GTCCAGGCCC AATAACTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016593--C:Cdc73/Paf1 complex
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0010452--P:histone H3-K36 methylation
GO:0051568--P:histone H3-K4 methylation
GO:0009910--P:negative regulation of flower development
GO:0016441--P:posttranscriptional gene silencing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	79.02	6.00e-144	503.00
IUUC-Aml-002245	Ailuropoda melanoleuca	38.59	4.00e-49	187.00
IUUC-Atr-003142	Amborella trichopoda	68.18	4.00e-80	290.00
IUUC-Apl-003179	Anas platyrhynchos	38.26	3.00e-51	194.00
IUUC-Aca-004880	Anolis carolinensis	38.98	5.00e-56	210.00
IUUC-Aly-005956	Arabidopsis lyrata	69.23	1.00e-123	435.00
IUUC-Ath-007230	Arabidopsis thaliana	69.54	2.00e-121	427.00
IUUC-Acl-008297	Aspergillus clavatus	32.14	9.00e-17	80.50
IUUC-Ame-011511	Astyanax mexicanus	39.62	5.00e-52	197.00
IUUC-Bgr-012189	Blumeria graminis	30.25	2.00e-17	82.00
IUUC-Bta-012936	Bos taurus	38.59	3.00e-49	188.00
IUUC-Bdi-015020	Brachypodium distachyon	91.36	1.00e-145	508.00
IUUC-Bol-016345	Brassica oleracea	69.54	8.00e-124	435.00
IUUC-Bra-017323	Brassica rapa	69.54	7.00e-124	436.00
IUUC-Cja-019961	Callithrix jacchus	38.59	5.00e-49	187.00
IUUC-Cfa-020862	Canis familiaris	38.91	2.00e-49	188.00
IUUC-Cpo-021356	Cavia porcellus	38.59	3.00e-49	187.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	41.85	1.00e-47	182.00
IUUC-Csa-024067	Chlorocebus sabaeus	38.59	7.00e-49	186.00
IUUC-Cho-024421	Choloepus hoffmanni	38.27	1.00e-21	95.10
IUUC-Cin-025261	Ciona intestinalis	38.14	1.00e-53	202.00
IUUC-Cne-026846	Cryptococcus neoformans	31.51	4.00e-24	104.00
IUUC-Dre-027706	Danio rerio	31.83	1.00e-30	126.00
IUUC-Dno-029084	Dasypus novemcinctus	38.66	9.00e-48	182.00
IUUC-Dor-030353	Dipodomys ordii	34.17	6.00e-38	150.00
IUUC-Dme-031836	Drosophila melanogaster	34.91	2.00e-51	195.00
IUUC-Ete-032261	Echinops telfairi	38.26	1.00e-48	186.00
IUUC-Eca-034231	Equus caballus	36.33	5.00e-41	160.00
IUUC-Eeu-034828	Erinaceus europaeus	38.06	3.00e-46	177.00
IUUC-Fca-036569	Felis catus	38.59	5.00e-49	187.00
IUUC-Fal-037469	Ficedula albicollis	38.91	9.00e-52	196.00
IUUC-Fox-038047	Fusarium oxysporum	25.86	3.00e-18	85.50
IUUC-Gmo-039579	Gadus morhua	41.16	4.00e-54	204.00
IUUC-Gga-040808	Gallus gallus	38.26	1.00e-50	192.00
IUUC-Gac-042100	Gasterosteus aculeatus	40.19	8.00e-53	199.00
IUUC-Gma-044408	Glycine max	70.77	8.00e-123	432.00
IUUC-Ggo-045227	Gorilla gorilla	38.59	5.00e-49	187.00
IUUC-Hsa-045839	Homo sapiens	38.59	5.00e-49	187.00
IUUC-Hvu-047591	Hordeum vulgare	87.65	3.00e-148	516.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	38.59	4.00e-49	187.00
IUUC-Lch-049549	Latimeria chalumnae	36.33	4.00e-46	177.00
IUUC-Loc-052540	Lepisosteus oculatus	39.23	4.00e-48	184.00
IUUC-Lma-052992	Leptosphaeria maculans	25.93	3.00e-18	85.10
IUUC-Laf-053907	Loxodonta africana	38.59	4.00e-49	187.00
IUUC-Mcc-055828	Macaca mulatta	36.25	1.00e-45	176.00
IUUC-Meu-056075	Macropus eugenii	41.60	8.00e-47	179.00
IUUC-Mor-056971	Magnaporthe oryzae	35.33	1.00e-19	89.70
IUUC-Mtr-057728	Medicago truncatula	68.00	1.00e-109	388.00
IUUC-Mga-059872	Meleagris gallopavo	38.26	5.00e-51	194.00
IUUC-Mmr-060985	Microcebus murinus	38.26	2.00e-48	185.00
IUUC-Mdo-062758	Monodelphis domestica	39.30	5.00e-51	194.00
IUUC-Mmu-063580	Mus musculus	38.26	1.00e-48	186.00
IUUC-Mac-064880	Musa acuminata	76.85	8.00e-134	468.00
IUUC-Mpu-066577	Mustela putorius furo	38.59	8.00e-49	186.00
IUUC-Nle-069573	Nomascus leucogenys	38.59	5.00e-49	187.00
IUUC-Opr-070216	Ochotona princeps	39.23	6.00e-50	190.00
IUUC-Ont-071981	Oreochromis niloticus	39.23	9.00e-52	196.00
IUUC-Oan-073223	Ornithorhynchus anatinus	42.64	2.00e-36	144.00
IUUC-Ocu-074199	Oryctolagus cuniculus	35.67	9.00e-40	156.00
IUUC-Oba-075255	Oryza barthii	84.57	4.00e-133	466.00
IUUC-Obr-076168	Oryza brachyantha	97.42	1.00e-110	392.00
IUUC-Ogl-077777	Oryza glaberrima	95.68	2.00e-154	537.00
IUUC-Ogu-078780	Oryza glumaepatula	95.68	2.00e-154	537.00
IUUC-Oin-079228	Oryza indica	95.37	1.00e-158	551.00
IUUC-Olo-080617	Oryza longistaminata	99.31	8.00e-82	294.00
IUUC-Ome-081421	Oryza meridionalis	95.06	4.00e-154	536.00
IUUC-Oni-082997	Oryza nivara	95.37	1.00e-158	551.00
IUUC-Opu-083931	Oryza punctata	94.75	1.00e-157	548.00
IUUC-Oru-084645	Oryza rufipogon	95.68	2.00e-154	537.00
IUUC-Osa-085842	Oryza sativa	95.37	1.00e-158	551.00
IUUC-Ola-086696	Oryzias latipes	38.91	2.00e-48	185.00
IUUC-Olu-087643	Ostreococcus lucimarinus	47.11	8.00e-49	186.00
IUUC-Oga-088272	Otolemur garnettii	38.59	4.00e-49	187.00
IUUC-Oar-089416	Ovis aries	38.59	3.00e-49	188.00
IUUC-Ptr-090944	Pan troglodytes	38.59	5.00e-49	187.00
IUUC-Pan-091861	Papio anubis	38.59	5.00e-49	187.00
IUUC-Psi-093750	Pelodiscus sinensis	38.26	4.00e-50	191.00
IUUC-Pma-094608	Petromyzon marinus	38.92	2.00e-45	175.00
IUUC-Ppa-095737	Physcomitrella patens	61.89	5.00e-105	373.00
IUUC-Pfo-096479	Poecilia formosa	39.87	1.00e-51	195.00
IUUC-Pab-098179	Pongo abelii	38.59	5.00e-49	187.00
IUUC-Pop-099532	Populus trichocarpa	69.36	4.00e-110	390.00
IUUC-Pca-100664	Procavia capensis	33.91	2.00e-23	102.00
IUUC-Ppe-102056	Prunus persica	68.92	2.00e-118	418.00
IUUC-Pva-102859	Pteropus vampyrus	38.26	4.00e-48	184.00
IUUC-Rno-105826	Rattus norvegicus	38.26	1.00e-48	185.00
IUUC-Sha-106660	Sarcophilus harrisii	38.59	2.00e-50	191.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	34.29	3.00e-20	91.70
IUUC-Spo-108244	Schizosaccharomyces pombe	25.28	8.00e-20	90.10
IUUC-Smo-109234	Selaginella moellendorffii	57.10	5.00e-88	317.00
IUUC-Sit-110048	Setaria italica	91.98	1.00e-137	481.00
IUUC-Sly-111618	Solanum lycopersicum	61.47	6.00e-104	369.00
IUUC-Stu-112543	Solanum tuberosum	61.47	1.00e-105	375.00
IUUC-Sar-113743	Sorex araneus	39.37	5.00e-33	134.00
IUUC-Sbi-114309	Sorghum bicolor	90.43	9.00e-137	478.00
IUUC-Ssc-115560	Sus scrofa	37.30	1.00e-45	175.00
IUUC-Tgu-117300	Taeniopygia guttata	38.59	3.00e-51	194.00
IUUC-Tru-117933	Takifugu rubripes	39.55	1.00e-52	199.00
IUUC-Tsy-119574	Tarsius syrichta	32.48	4.00e-31	127.00
IUUC-Tni-120191	Tetraodon nigroviridis	39.17	6.00e-40	156.00
IUUC-Tca-120983	Theobroma cacao	69.02	5.00e-113	400.00
IUUC-Tae-124056	Triticum aestivum	88.58	5.00e-147	513.00
IUUC-Tur-126711	Triticum urartu	88.00	4.00e-144	503.00
IUUC-Tbe-127802	Tupaia belangeri	38.59	5.00e-49	187.00
IUUC-Ttr-128861	Tursiops truncatus	44.19	3.00e-18	84.70
IUUC-Vpa-130618	Vicugna pacos	38.37	2.00e-40	158.00
IUUC-Vvi-130981	Vitis vinifera	72.92	9.00e-118	415.00
IUUC-Xtr-132460	Xenopus tropicalis	38.91	8.00e-49	186.00
IUUC-Xma-134154	Xiphophorus maculatus	39.87	8.00e-52	196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence