iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Uma-129556

Ensembl Protein ID

KIS66931

UniProt Accession

Q4P2E9; A0A0D1DSR7; ERB1_USTMA

Genbank Protein ID

KIS66931.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

CM003155

Gene Name

ERB1; UMAG_05714

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
UMAG_05714	KIS66931	KIS66931

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-11	41.6	558	593

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++v+cl+  ++ + lv+G+dDg  ++WD+  g+++ 
   Q: 558  GRVRCLSVdPTgNWLVTGGDDGRARLWDVAIGRCTA 593
           579*****9777*****************9999875 PP

Organism

Ustilago maydis

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MVRPSSSSSA SASAARSGAA KRKRNLPTAT NPTTRASVAA NVKGKGKTKA LELDLVVSDD 60
GEEDGELDLE SDSGDDDAND DDDNDNEQDD FPEIDLEDSD DDQDVEDEDE PGAQEEVDSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGCGAC CGTCCTCTTC CAGCTCAGCG TCAGCCTCTG CTGCGCGCAG CGGCGCTGCA 60
AAGAGGAAGC GCAACCTGCC CACAGCCACG AACCCCACCA CAAGAGCGTC AGTCGCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

uma:UMAG_05714

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	42.11	2.00e-68	251.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.87	1.00e-131	462.00
IUUC-Atr-003141	Amborella trichopoda	36.54	4.00e-72	263.00
IUUC-Apl-003545	Anas platyrhynchos	40.87	2.00e-124	437.00
IUUC-Aly-005649	Arabidopsis lyrata	42.90	4.00e-79	287.00
IUUC-Ath-007625	Arabidopsis thaliana	38.55	3.00e-119	421.00
IUUC-Ago-007958	Ashbya gossypii	43.93	4.00e-166	577.00
IUUC-Acl-008344	Aspergillus clavatus	45.86	4.00e-156	543.00
IUUC-Afl-008616	Aspergillus flavus	45.99	2.00e-156	545.00
IUUC-Afu-009083	Aspergillus fumigatus	46.13	8.00e-152	529.00
IUUC-Ani-009365	Aspergillus nidulans	46.28	1.00e-155	541.00
IUUC-Ang-009796	Aspergillus niger	43.84	1.00e-155	541.00
IUUC-Aor-010015	Aspergillus oryzae	45.99	2.00e-156	544.00
IUUC-Ate-010537	Aspergillus terreus	46.34	1.00e-158	551.00
IUUC-Ame-011767	Astyanax mexicanus	47.33	2.00e-65	240.00
IUUC-Bgr-012286	Blumeria graminis	45.91	5.00e-160	556.00
IUUC-Bta-013569	Bos taurus	42.51	2.00e-143	501.00
IUUC-Bci-013820	Botrytis cinerea	45.15	3.00e-151	526.00
IUUC-Bdi-014477	Brachypodium distachyon	39.34	3.00e-123	434.00
IUUC-Bol-016099	Brassica oleracea	38.50	1.00e-126	445.00
IUUC-Bra-017174	Brassica rapa	38.65	2.00e-127	448.00
IUUC-Cel-018201	Caenorhabditis elegans	39.64	2.00e-120	424.00
IUUC-Cja-019009	Callithrix jacchus	46.87	9.00e-92	329.00
IUUC-Cfa-020173	Canis familiaris	42.45	5.00e-79	287.00
IUUC-Cpo-021796	Cavia porcellus	43.61	5.00e-146	509.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	45.22	7.00e-84	303.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.75	4.00e-151	526.00
IUUC-Cin-025782	Ciona intestinalis	42.05	1.00e-145	508.00
IUUC-Csv-026352	Ciona savignyi	44.83	1.00e-89	322.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	40.29	3.00e-121	427.00
IUUC-Cne-027004	Cryptococcus neoformans	48.99	0.00e+00	701.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.87	5.00e-109	386.00
IUUC-Dre-028658	Danio rerio	42.71	1.00e-150	525.00
IUUC-Dno-028883	Dasypus novemcinctus	42.96	5.00e-150	523.00
IUUC-Dor-031031	Dipodomys ordii	42.30	2.00e-149	521.00
IUUC-Dse-031443	Dothistroma septosporum	45.06	2.00e-164	570.00
IUUC-Dme-031786	Drosophila melanogaster	40.62	6.00e-146	509.00
IUUC-Eca-033677	Equus caballus	43.42	1.00e-148	518.00
IUUC-Eeu-035310	Erinaceus europaeus	40.59	6.00e-114	402.00
IUUC-Fca-035888	Felis catus	42.66	3.00e-150	523.00
IUUC-Fal-037438	Ficedula albicollis	54.03	4.00e-57	213.00
IUUC-Fox-037973	Fusarium oxysporum	43.42	4.00e-160	556.00
IUUC-Fso-038187	Fusarium solani	43.57	5.00e-161	559.00
IUUC-Gmo-039114	Gadus morhua	39.13	6.00e-131	459.00
IUUC-Ggr-039746	Gaeumannomyces graminis	43.93	7.00e-161	559.00
IUUC-Gga-040631	Gallus gallus	41.44	4.00e-79	286.00
IUUC-Gac-042582	Gasterosteus aculeatus	39.41	5.00e-137	479.00
IUUC-Gma-044307	Glycine max	39.73	2.00e-124	437.00
IUUC-Ggo-045587	Gorilla gorilla	42.94	4.00e-152	529.00
IUUC-Hsa-046319	Homo sapiens	43.05	2.00e-152	530.00
IUUC-Hvu-047526	Hordeum vulgare	40.51	2.00e-119	421.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	42.90	8.00e-148	515.00
IUUC-Kpa-049221	Komagataella pastoris	41.23	2.00e-159	554.00
IUUC-Lch-049640	Latimeria chalumnae	43.18	7.00e-158	549.00
IUUC-Lpe-051135	Leersia perrieri	42.61	4.00e-69	254.00
IUUC-Loc-051930	Lepisosteus oculatus	43.52	1.00e-156	544.00
IUUC-Lma-053290	Leptosphaeria maculans	43.64	2.00e-157	547.00
IUUC-Laf-053903	Loxodonta africana	40.85	4.00e-127	446.00
IUUC-Mcc-055471	Macaca mulatta	42.75	3.00e-151	527.00
IUUC-Meu-056190	Macropus eugenii	43.33	3.00e-148	517.00
IUUC-Mor-057135	Magnaporthe oryzae	43.50	8.00e-154	535.00
IUUC-Mpo-057475	Magnaporthe poae	43.06	8.00e-149	519.00
IUUC-Mtr-058689	Medicago truncatula	37.71	5.00e-112	396.00
IUUC-Mla-059149	Melampsora laricipopulina	50.65	0.00e+00	699.00
IUUC-Mga-059645	Meleagris gallopavo	37.05	2.00e-47	180.00
IUUC-Mvi-060485	Microbotryum violaceum	47.41	0.00e+00	636.00
IUUC-Mmr-061674	Microcebus murinus	42.81	2.00e-147	514.00
IUUC-Mdo-062973	Monodelphis domestica	43.81	3.00e-154	536.00
IUUC-Mmu-064180	Mus musculus	42.41	3.00e-146	510.00
IUUC-Mac-064535	Musa acuminata	36.67	4.00e-76	277.00
IUUC-Mpu-066406	Mustela putorius furo	43.27	3.00e-151	526.00
IUUC-Mlu-067795	Myotis lucifugus	42.99	2.00e-140	491.00
IUUC-Nfi-068516	Neosartorya fischeri	45.85	3.00e-143	500.00
IUUC-Ncr-068767	Neurospora crassa	44.49	1.00e-147	515.00
IUUC-Opr-071084	Ochotona princeps	43.39	5.00e-51	193.00
IUUC-Ont-071614	Oreochromis niloticus	41.52	6.00e-149	519.00
IUUC-Oba-075980	Oryza barthii	43.23	6.00e-70	256.00
IUUC-Obr-076799	Oryza brachyantha	42.94	5.00e-75	273.00
IUUC-Ogl-077134	Oryza glaberrima	44.13	8.00e-70	256.00
IUUC-Ogu-078655	Oryza glumaepatula	44.13	1.00e-69	256.00
IUUC-Oin-079654	Oryza indica	44.13	1.00e-69	256.00
IUUC-Olo-080706	Oryza longistaminata	43.52	1.00e-69	255.00
IUUC-Ome-081716	Oryza meridionalis	44.41	4.00e-70	257.00
IUUC-Oni-082508	Oryza nivara	44.13	2.00e-69	255.00
IUUC-Opu-083707	Oryza punctata	44.13	2.00e-69	254.00
IUUC-Oru-084453	Oryza rufipogon	43.52	1.00e-69	255.00
IUUC-Osa-085811	Oryza sativa	43.84	2.00e-69	254.00
IUUC-Ola-087361	Oryzias latipes	43.54	3.00e-155	540.00
IUUC-Oga-088015	Otolemur garnettii	42.08	1.00e-151	528.00
IUUC-Oar-090058	Ovis aries	48.48	2.00e-46	178.00
IUUC-Ptr-090631	Pan troglodytes	48.85	6.00e-69	252.00
IUUC-Pan-092306	Papio anubis	42.84	1.00e-150	525.00
IUUC-Pma-094622	Petromyzon marinus	43.98	2.00e-158	550.00
IUUC-Pno-094794	Phaeosphaeria nodorum	41.24	7.00e-146	509.00
IUUC-Ppa-095528	Physcomitrella patens	38.78	1.00e-80	292.00
IUUC-Pfo-096682	Poecilia formosa	41.37	3.00e-153	533.00
IUUC-Pab-097939	Pongo abelii	40.98	1.00e-130	458.00
IUUC-Pop-099043	Populus trichocarpa	39.83	2.00e-115	407.00
IUUC-Pca-100333	Procavia capensis	41.77	6.00e-144	503.00
IUUC-Ppe-102078	Prunus persica	38.02	7.00e-118	416.00
IUUC-Pgr-103525	Puccinia graminis	49.00	0.00e+00	679.00
IUUC-Ptt-103929	Puccinia triticina	49.64	0.00e+00	653.00
IUUC-Pte-104029	Pyrenophora teres	44.65	8.00e-167	578.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	44.36	2.00e-165	574.00
IUUC-Rno-105248	Rattus norvegicus	43.22	4.00e-149	520.00
IUUC-Sce-106381	Saccharomyces cerevisiae	43.29	5.00e-164	569.00
IUUC-Sha-106519	Sarcophilus harrisii	44.14	2.00e-153	534.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.09	6.00e-146	509.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.32	9.00e-143	498.00
IUUC-Smo-109604	Selaginella moellendorffii	39.18	1.00e-119	422.00
IUUC-Sit-109742	Setaria italica	40.36	5.00e-126	443.00
IUUC-Sly-110970	Solanum lycopersicum	41.06	1.00e-69	255.00
IUUC-Stu-112593	Solanum tuberosum	39.05	1.00e-124	438.00
IUUC-Sar-113123	Sorex araneus	43.92	2.00e-57	214.00
IUUC-Sbi-113945	Sorghum bicolor	39.73	2.00e-121	428.00
IUUC-Sre-115188	Sporisorium reilianum	91.92	0.00e+00	1425.00
IUUC-Ssc-115352	Sus scrofa	45.55	5.00e-91	326.00
IUUC-Tru-117685	Takifugu rubripes	42.28	2.00e-153	535.00
IUUC-Tni-119982	Tetraodon nigroviridis	41.97	1.00e-147	514.00
IUUC-Tca-121664	Theobroma cacao	42.06	2.00e-76	278.00
IUUC-Tre-122229	Trichoderma reesei	41.68	3.00e-138	484.00
IUUC-Tvi-122576	Trichoderma virens	43.90	4.00e-138	483.00
IUUC-Tae-124110	Triticum aestivum	40.27	2.00e-112	398.00
IUUC-Tur-126781	Triticum urartu	42.11	6.00e-64	237.00
IUUC-Tme-127080	Tuber melanosporum	49.71	0.00e+00	632.00
IUUC-Ttr-128514	Tursiops truncatus	40.62	7.00e-95	339.00
IUUC-Vda-129715	Verticillium dahliae	44.65	3.00e-155	540.00
IUUC-Vvi-131211	Vitis vinifera	38.10	1.00e-120	425.00
IUUC-Xma-133883	Xiphophorus maculatus	41.67	3.00e-150	523.00
IUUC-Yli-134438	Yarrowia lipolytica	42.03	8.00e-149	519.00
IUUC-Zma-135341	Zea mays	36.23	6.00e-114	403.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence