iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099738

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 26 family protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_818535; POPTR_0005s20170g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s20170	POPTR_0005s20170.1	POPTR_0005s20170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.70e-70	237.3	108	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl+Nlg+tCY NSvLQcL++  ++re +++ ++  lne       +++l +l +lf++l  sk   ++p  ++++l+  +       qqD 
   Q: 108  GLTNLGATCYANSVLQCLYMNASFREGVFSVEPDVLNE-------QPVLYQLVRLFAQLHASKLAFIDPAPFITTLELDN-----AVQQDG 186
           9*****************************88888876.......48*****************************9666.....56**** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgke 180
           +Efl+ ll+ le+ l                       + +k +k +++++dlF+g++++ ++c +c++ s   s++e+f++l+++v+g +
   Q: 187  HEFLTLLLSLLERCL-----------------------SHSKVSKARTIVQDLFRGSVSQVTTCSNCGRDSeasSKTEDFYELQMNVKGLK 254
           ***************.......................46789999*********************988766699*************** PP
   S: 181  etkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeek 271
                sl+++L+++ + e+l+gen+y+ce ck++++a+ +++l++lP+vL ++LkR++f  ++  r+ki++ + fp eLd+ + +++p++ 
   Q: 255  -----SLDESLDQYLSVEQLHGENQYNCELCKSRVDATHRIRLRTLPDVLNFQLKRYEFLPKTTTRKKITSAFGFPGELDMGRRLSEPSQL 340
           .....9********************************************************************************98865 PP
   S: 272  qkekkkYeLiavvvHsG.slssGHYvayvknekgk.WllfdDskVtev 317
              + +Y+L+av++H+G  ++sGHY+a++k+e+ + W++fdD++V+ +
   Q: 341  ---EWIYDLSAVLIHKGtAVNSGHYIAHIKDENTGqWWEFDDEHVSNL 385
           ...79**************************65555*********976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTPPATRGKN KRNRPGDIAN ITSEILRKIH ANGKVTDGDV NQLYMIWKPV CQGCRVNTKD 60
NPNCFCGLIP PPNGSRKSGL WQKMSDILQA LGSDPFNDLR STDETPSGLT NLGATCYANS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATAAATCCG AGTCTTCTTG TTGATGTCGC CGTCGTCGTC GCCGTCGTCG TGATAATTGA 60
AAAGTGTGTG TTGTCTCTCT CTCTTTCCAC TCTAGCTTCT CAGCTTCTCC TTTTGGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s20170g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	56.78	0.00e+00	1126.00
IUUC-Aml-001357	Ailuropoda melanoleuca	26.41	1.00e-78	287.00
IUUC-Aly-006249	Arabidopsis lyrata	58.96	0.00e+00	1229.00
IUUC-Ath-006700	Arabidopsis thaliana	60.56	0.00e+00	1275.00
IUUC-Afl-008381	Aspergillus flavus	34.30	8.00e-37	150.00
IUUC-Ang-009759	Aspergillus niger	30.52	3.00e-37	151.00
IUUC-Aor-009931	Aspergillus oryzae	34.30	7.00e-37	150.00
IUUC-Bgr-012195	Blumeria graminis	34.78	3.00e-37	151.00
IUUC-Bta-012573	Bos taurus	31.81	1.00e-80	294.00
IUUC-Bci-013798	Botrytis cinerea	35.79	3.00e-40	161.00
IUUC-Bdi-014149	Brachypodium distachyon	58.22	0.00e+00	1171.00
IUUC-Bol-016289	Brassica oleracea	60.09	0.00e+00	1244.00
IUUC-Bra-017494	Brassica rapa	57.96	0.00e+00	1195.00
IUUC-Cja-019991	Callithrix jacchus	31.72	1.00e-81	297.00
IUUC-Cfa-020294	Canis familiaris	26.97	2.00e-81	296.00
IUUC-Cpo-021706	Cavia porcellus	26.69	3.00e-79	290.00
IUUC-Cre-022636	Chlamydomonas reinhardtii	43.44	3.00e-67	251.00
IUUC-Csa-023931	Chlorocebus sabaeus	26.81	2.00e-83	303.00
IUUC-Dno-029633	Dasypus novemcinctus	32.82	3.00e-69	256.00
IUUC-Dor-030809	Dipodomys ordii	38.02	6.00e-47	182.00
IUUC-Ete-032818	Echinops telfairi	31.85	7.00e-65	241.00
IUUC-Eca-033692	Equus caballus	27.17	2.00e-82	300.00
IUUC-Eeu-035185	Erinaceus europaeus	31.94	2.00e-34	140.00
IUUC-Fca-035676	Felis catus	32.12	2.00e-81	296.00
IUUC-Gmo-038532	Gadus morhua	31.85	2.00e-79	290.00
IUUC-Ggr-040075	Gaeumannomyces graminis	35.15	3.00e-35	144.00
IUUC-Gma-043910	Glycine max	64.25	0.00e+00	1331.00
IUUC-Ggo-045367	Gorilla gorilla	26.58	2.00e-77	283.00
IUUC-Hsa-046019	Homo sapiens	26.55	1.00e-81	297.00
IUUC-Hvu-047303	Hordeum vulgare	58.86	1.00e-171	595.00
IUUC-Itr-048319	Ictidomys tridecemlineatus	29.91	4.00e-81	296.00
IUUC-Lch-049989	Latimeria chalumnae	31.72	7.00e-83	301.00
IUUC-Lpe-051612	Leersia perrieri	57.90	0.00e+00	1158.00
IUUC-Laf-054043	Loxodonta africana	26.71	1.00e-84	307.00
IUUC-Mcc-054986	Macaca mulatta	26.54	2.00e-82	300.00
IUUC-Meu-056228	Macropus eugenii	38.48	5.00e-58	219.00
IUUC-Mtr-058762	Medicago truncatula	63.64	0.00e+00	1320.00
IUUC-Mvi-060269	Microbotryum violaceum	36.74	1.00e-47	185.00
IUUC-Mmr-060887	Microcebus murinus	27.12	3.00e-83	302.00
IUUC-Mdo-062506	Monodelphis domestica	31.88	2.00e-81	297.00
IUUC-Mmu-063642	Mus musculus	26.32	1.00e-86	313.00
IUUC-Mac-064896	Musa acuminata	58.78	0.00e+00	1218.00
IUUC-Mpu-066194	Mustela putorius furo	26.61	1.00e-81	297.00
IUUC-Mlu-067233	Myotis lucifugus	27.10	9.00e-82	298.00
IUUC-Nle-069052	Nomascus leucogenys	31.77	6.00e-82	298.00
IUUC-Opr-070890	Ochotona princeps	31.52	1.00e-75	277.00
IUUC-Ocu-073796	Oryctolagus cuniculus	33.08	2.00e-69	256.00
IUUC-Oba-075563	Oryza barthii	58.47	0.00e+00	1183.00
IUUC-Obr-076394	Oryza brachyantha	57.68	0.00e+00	1178.00
IUUC-Ogl-077339	Oryza glaberrima	68.91	1.00e-118	418.00
IUUC-Ogu-079007	Oryza glumaepatula	57.65	0.00e+00	1153.00
IUUC-Oin-079997	Oryza indica	58.47	0.00e+00	1184.00
IUUC-Olo-080364	Oryza longistaminata	57.33	0.00e+00	1174.00
IUUC-Ome-081165	Oryza meridionalis	57.57	0.00e+00	1154.00
IUUC-Oni-083026	Oryza nivara	58.47	0.00e+00	1184.00
IUUC-Opu-083284	Oryza punctata	58.10	0.00e+00	1163.00
IUUC-Oru-084797	Oryza rufipogon	58.56	0.00e+00	1186.00
IUUC-Osa-086221	Oryza sativa	68.91	1.00e-118	418.00
IUUC-Oga-088687	Otolemur garnettii	31.96	2.00e-82	300.00
IUUC-Oar-090345	Ovis aries	32.07	5.00e-78	285.00
IUUC-Ptr-090734	Pan troglodytes	26.97	8.00e-83	301.00
IUUC-Ppa-095808	Physcomitrella patens	46.59	0.00e+00	873.00
IUUC-Pab-098129	Pongo abelii	26.55	1.00e-81	297.00
IUUC-Pca-100647	Procavia capensis	37.14	4.00e-47	182.00
IUUC-Ppe-102091	Prunus persica	68.47	0.00e+00	1432.00
IUUC-Pva-102719	Pteropus vampyrus	26.58	3.00e-81	296.00
IUUC-Sha-107620	Sarcophilus harrisii	31.86	6.00e-80	291.00
IUUC-Smo-109487	Selaginella moellendorffii	45.26	0.00e+00	796.00
IUUC-Sit-110683	Setaria italica	57.22	0.00e+00	1127.00
IUUC-Sly-111377	Solanum lycopersicum	62.22	0.00e+00	1273.00
IUUC-Sar-113099	Sorex araneus	32.89	2.00e-70	259.00
IUUC-Sbi-113833	Sorghum bicolor	69.28	2.00e-107	381.00
IUUC-Tsy-119201	Tarsius syrichta	30.31	1.00e-65	244.00
IUUC-Tae-125814	Triticum aestivum	57.75	0.00e+00	1139.00
IUUC-Tur-126599	Triticum urartu	56.42	0.00e+00	1125.00
IUUC-Ttr-128312	Tursiops truncatus	26.26	3.00e-77	283.00
IUUC-Vpa-130348	Vicugna pacos	26.64	2.00e-78	286.00
IUUC-Vvi-131353	Vitis vinifera	67.30	0.00e+00	1442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence