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Tag Content
iUUCD ID IUUC-Bra-016845
Ensembl Protein ID Bra000397.1-P
UniProt Accession M4C869; M4C869_BRARP
Protein Name Ubiquitin-related modifier 1 homolog
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra000397 Bra000397.1 Bra000397.1-P
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 39.29 3.00e-13 67.80 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Brassica rapa
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MQLTLEFGGG LELLCDSEKI HKVNVDLPNG VEELTMKDLL SWVRTNVIKE RPEMFIKGDT 60
VRPGVLVLVN DCDWELSGQL ETTIEDKDVI VFISTLHGG 99
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Protein Fasta Sequence


>IUUC-Bra-016845|ULD,UBQ_Other|Brassica rapa
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Nucleotide Sequence
(Fasta)
ATGCAACTAA CTCTCGAATT CGGGTGAGAT TCTCTCTCTT TCGAAACCTC TCAACTCCCA 60
CCGAGTTTTG CTTCTTAGAT TAGTCTGAAC GATTGGATAT ACATATGTGT ATAGTTCCTG 120
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Nucleotide Fasta Sequence


>IUUC-Bra-016845|ULD,UBQ_Other|Brassica rapa
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 54.55 3.00e-28 115.00
IUUC-Atr-003089 Amborella trichopoda 69.70 4.00e-37 145.00
IUUC-Apl-003382 Anas platyrhynchos 53.76 8.00e-27 110.00
IUUC-Aca-004981 Anolis carolinensis 55.67 2.00e-28 116.00
IUUC-Aly-005517 Arabidopsis lyrata 86.96 6.00e-43 164.00
IUUC-Ath-006718 Arabidopsis thaliana 86.87 2.00e-39 153.00
IUUC-Ago-007917 Ashbya gossypii 40.59 2.00e-20 90.10
IUUC-Acl-008054 Aspergillus clavatus 56.00 7.00e-13 64.30
IUUC-Afl-008704 Aspergillus flavus 43.96 5.00e-15 71.60
IUUC-Aor-009890 Aspergillus oryzae 45.63 4.00e-19 86.30
IUUC-Bta-012448 Bos taurus 54.55 3.00e-28 115.00
IUUC-Bci-013865 Botrytis cinerea 38.61 9.00e-17 77.80
IUUC-Bdi-014980 Brachypodium distachyon 68.60 9.00e-29 117.00
IUUC-Bol-016055 Brassica oleracea 100.00 2.00e-45 172.00
IUUC-Cel-018485 Caenorhabditis elegans 37.86 2.00e-11 60.10
IUUC-Cja-019587 Callithrix jacchus 53.54 3.00e-28 115.00
IUUC-Cfa-020653 Canis familiaris 55.56 2.00e-28 116.00
IUUC-Cpo-021622 Cavia porcellus 53.54 3.00e-28 115.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 57.58 1.00e-30 123.00
IUUC-Csa-023756 Chlorocebus sabaeus 53.95 7.00e-20 89.40
IUUC-Cgl-026518 Colletotrichum gloeosporioides 37.62 2.00e-15 73.90
IUUC-Cne-026953 Cryptococcus neoformans 51.43 7.00e-25 105.00
IUUC-Cme-027314 Cyanidioschyzon merolae 50.00 2.00e-21 93.20
IUUC-Dre-027884 Danio rerio 60.82 2.00e-30 122.00
IUUC-Dno-029262 Dasypus novemcinctus 53.16 3.00e-19 87.40
IUUC-Dor-030601 Dipodomys ordii 50.00 1.00e-14 70.90
IUUC-Dme-031893 Drosophila melanogaster 48.48 7.00e-25 104.00
IUUC-Ete-032773 Echinops telfairi 51.55 2.00e-26 109.00
IUUC-Eca-034187 Equus caballus 54.55 2.00e-28 116.00
IUUC-Eeu-034808 Erinaceus europaeus 53.54 8.00e-28 114.00
IUUC-Fca-036107 Felis catus 55.56 3.00e-28 115.00
IUUC-Fal-036607 Ficedula albicollis 51.61 3.00e-25 105.00
IUUC-Fox-037698 Fusarium oxysporum 35.64 1.00e-14 70.90
IUUC-Gmo-039492 Gadus morhua 59.79 5.00e-29 118.00
IUUC-Ggr-039965 Gaeumannomyces graminis 39.60 2.00e-15 74.30
IUUC-Gga-041268 Gallus gallus 53.61 3.00e-28 115.00
IUUC-Gac-042111 Gasterosteus aculeatus 54.55 7.00e-29 117.00
IUUC-Gma-043240 Glycine max 80.00 2.00e-37 146.00
IUUC-Ggo-045176 Gorilla gorilla 53.95 2.00e-14 71.20
IUUC-Hsa-046077 Homo sapiens 53.54 9.00e-23 97.80
IUUC-Itr-048111 Ictidomys tridecemlineatus 53.85 3.00e-20 89.40
IUUC-Kpa-049157 Komagataella pastoris 39.60 9.00e-16 74.30
IUUC-Lch-049889 Latimeria chalumnae 56.57 1.00e-27 113.00
IUUC-Lpe-050783 Leersia perrieri 68.29 2.00e-29 119.00
IUUC-Loc-052400 Lepisosteus oculatus 57.58 3.00e-29 119.00
IUUC-Lma-053259 Leptosphaeria maculans 41.58 3.00e-15 72.80
IUUC-Laf-053596 Loxodonta africana 51.49 1.00e-26 110.00
IUUC-Mcc-054845 Macaca mulatta 54.44 2.00e-25 105.00
IUUC-Meu-055968 Macropus eugenii 55.56 4.00e-29 119.00
IUUC-Mor-057126 Magnaporthe oryzae 33.01 2.00e-12 64.30
IUUC-Mpo-057311 Magnaporthe poae 36.89 1.00e-14 71.60
IUUC-Mtr-058266 Medicago truncatula 79.31 5.00e-36 141.00
IUUC-Mla-058847 Melampsora laricipopulina 34.29 1.00e-08 51.60
IUUC-Mga-059468 Meleagris gallopavo 52.69 3.00e-26 108.00
IUUC-Mvi-060235 Microbotryum violaceum 54.55 1.00e-15 75.10
IUUC-Mmr-061172 Microcebus murinus 37.50 8.10e-01 28.10
IUUC-Mdo-061948 Monodelphis domestica 55.56 3.00e-29 119.00
IUUC-Mmu-063946 Mus musculus 55.67 4.00e-28 115.00
IUUC-Mac-064812 Musa acuminata 68.24 9.00e-31 124.00
IUUC-Mpu-066763 Mustela putorius furo 55.56 4.00e-29 118.00
IUUC-Mlu-066970 Myotis lucifugus 53.95 5.00e-20 88.60
IUUC-Ncr-068824 Neurospora crassa 36.63 5.00e-15 72.40
IUUC-Nle-069849 Nomascus leucogenys 53.95 6.00e-20 89.40
IUUC-Opr-070227 Ochotona princeps 53.54 3.00e-28 115.00
IUUC-Ont-072530 Oreochromis niloticus 55.56 7.00e-29 117.00
IUUC-Oan-073191 Ornithorhynchus anatinus 56.04 7.00e-26 107.00
IUUC-Ocu-074460 Oryctolagus cuniculus 55.56 3.00e-28 115.00
IUUC-Oba-075499 Oryza barthii 65.06 9.00e-29 119.00
IUUC-Obr-076896 Oryza brachyantha 67.86 2.00e-28 119.00
IUUC-Ogl-077834 Oryza glaberrima 65.06 5.00e-29 118.00
IUUC-Ogu-078622 Oryza glumaepatula 65.06 5.00e-29 118.00
IUUC-Oin-079358 Oryza indica 65.06 1.00e-28 119.00
IUUC-Olo-081035 Oryza longistaminata 63.64 2.00e-31 127.00
IUUC-Oni-082425 Oryza nivara 65.06 5.00e-29 118.00
IUUC-Opu-083461 Oryza punctata 65.85 2.00e-28 117.00
IUUC-Oru-084875 Oryza rufipogon 67.61 4.00e-24 101.00
IUUC-Oga-089128 Otolemur garnettii 54.55 1.00e-28 117.00
IUUC-Oar-089896 Ovis aries 54.55 3.00e-28 115.00
IUUC-Ptr-091618 Pan troglodytes 53.95 2.00e-14 71.20
IUUC-Pan-092238 Papio anubis 53.95 7.00e-20 89.00
IUUC-Psi-093879 Pelodiscus sinensis 56.57 4.00e-29 118.00
IUUC-Pma-094484 Petromyzon marinus 55.56 3.00e-22 95.90
IUUC-Ppa-095801 Physcomitrella patens 64.65 1.00e-27 113.00
IUUC-Pfo-097192 Poecilia formosa 61.05 5.00e-29 118.00
IUUC-Pab-098203 Pongo abelii 53.54 9.00e-23 97.40
IUUC-Pop-099614 Populus trichocarpa 75.29 6.00e-34 134.00
IUUC-Pca-100507 Procavia capensis 55.26 3.00e-20 89.00
IUUC-Ppe-101174 Prunus persica 81.82 2.00e-45 172.00
IUUC-Pva-102735 Pteropus vampyrus 52.53 2.00e-25 106.00
IUUC-Pgr-103510 Puccinia graminis 35.92 4.00e-10 56.20
IUUC-Ptt-103918 Puccinia triticina 34.95 1.00e-09 55.10
IUUC-Pte-104173 Pyrenophora teres 41.75 8.00e-18 81.30
IUUC-Pyt-104806 Pyrenophora triticirepentis 42.72 3.00e-18 82.80
IUUC-Rno-105820 Rattus norvegicus 57.89 1.00e-28 117.00
IUUC-Sce-106366 Saccharomyces cerevisiae 37.62 1.00e-16 77.40
IUUC-Sja-107727 Schizosaccharomyces japonicus 37.76 1.00e-13 67.80
IUUC-Spo-108074 Schizosaccharomyces pombe 40.20 3.00e-10 55.80
IUUC-Smo-108944 Selaginella moellendorffii 61.54 1.00e-26 110.00
IUUC-Sit-110277 Setaria italica 66.67 2.00e-30 122.00
IUUC-Sly-111505 Solanum lycopersicum 77.65 4.00e-35 138.00
IUUC-Stu-112076 Solanum tuberosum 78.82 1.00e-35 140.00
IUUC-Sbi-114274 Sorghum bicolor 60.00 4.00e-28 115.00
IUUC-Sre-114953 Sporisorium reilianum 46.08 4.00e-21 92.40
IUUC-Ssc-115418 Sus scrofa 54.55 3.00e-28 115.00
IUUC-Tgu-117311 Taeniopygia guttata 51.61 3.00e-25 105.00
IUUC-Tru-118598 Takifugu rubripes 54.95 1.00e-25 106.00
IUUC-Tni-120109 Tetraodon nigroviridis 55.21 4.00e-25 105.00
IUUC-Tca-120942 Theobroma cacao 75.90 2.00e-35 139.00
IUUC-Tre-122099 Trichoderma reesei 41.05 4.00e-11 58.50
IUUC-Tvi-122285 Trichoderma virens 41.75 1.00e-13 67.40
IUUC-Tae-125193 Triticum aestivum 68.67 2.00e-30 122.00
IUUC-Tur-126677 Triticum urartu 61.05 6.00e-28 115.00
IUUC-Tme-127120 Tuber melanosporum 39.60 2.00e-17 80.50
IUUC-Tbe-128050 Tupaia belangeri 39.39 2.00e-14 70.10
IUUC-Ttr-129019 Tursiops truncatus 55.56 3.00e-28 115.00
IUUC-Uma-129483 Ustilago maydis 44.12 2.00e-20 89.70
IUUC-Vda-129690 Verticillium dahliae 31.58 2.00e-09 53.50
IUUC-Vvi-131174 Vitis vinifera 83.13 6.00e-36 141.00
IUUC-Xma-133862 Xiphophorus maculatus 61.05 5.00e-29 118.00
IUUC-Yli-134398 Yarrowia lipolytica 42.42 7.00e-18 81.30
IUUC-Zma-134964 Zea mays 67.06 5.00e-29 118.00
Created Date 25-Jun-2017

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