iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131345

UUCD1 version

UUC-ViV-00005

Ensembl Protein ID

VIT_19s0015g01220.t01

UniProt Accession

A5ADM7; A5ADM7_VITVI

Genbank Protein ID

CAN62349.1; CBI39806.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM423878; FN596747

Gene Name

TEX1; VIT_19s0015g01220; VITISV_004943

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_19s0015g01220	VIT_19s0015g01220.t01	VIT_19s0015g01220.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-31	105.2	63	102
UBD/Beta-Prp	1.50e-43	149.6	113	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++     +l++++s+D+t+++WD r+g++++
   Q: 63   GHTDSVDQLCWdpKHaDLIATASGDKTVRLWDARSGKCTQ 102
           8**********9533799********************98 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvv 145
           ++++pdg  ++ g +D+ + + d++++k++h  k  +++v  ++++ +g+ +  ++   t++v   +    l  tl  h++   c+++
   Q: 113  ITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPALRPLD-TLMAHTAGCYCIAI 198
           799*****************************99.**************99999999******999******9.************** PP
   S: 146  hpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           +p g++++ Gs+D+ v lWd++ + ++rt+t+  + +v+ +sf+++g++++s+s+d  + + +++tg++v++  + ++ ++sv+  p+
   Q: 199  DPIGRYFAVGSADSLVSLWDISEMLCVRTFTK-LEWPVRTISFNHTGEYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPK 284
           *******************************9.**********************************97776665.7899******** PP
   S: 234  derlvsgssDg 244
           +++l+ +++D+
   Q: 285  HNLLAYAGDDK 295
           ********997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEETIPFKNL HSREYQGHKK KVHSVAWNCT GTKLASGSVD QTARIWLIEQ HGHGKVKDIE 60
LKGHTDSVDQ LCWDPKHADL IATASGDKTV RLWDARSGKC TQQAELSGEN INITYKPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTGGAAG CGTAGCAAGC ATGGAGGAGA CAATACCCTT CAAGAATCTC CATAGCAGAG 60
AGTATCAAGG TCACAAGAAG AAGGTCTCTC CCTCTTTCTC CACAAAACCC TAGTTTATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus

KEGG

vvi:100241262

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	77.03	5.00e-143	499.00
IUUC-Aml-001264	Ailuropoda melanoleuca	51.32	2.00e-94	337.00
IUUC-Atr-003050	Amborella trichopoda	89.84	3.00e-173	599.00
IUUC-Apl-003426	Anas platyrhynchos	45.66	2.00e-65	241.00
IUUC-Aca-004931	Anolis carolinensis	49.08	2.00e-64	237.00
IUUC-Aly-006237	Arabidopsis lyrata	88.89	2.00e-171	593.00
IUUC-Ath-007581	Arabidopsis thaliana	88.57	1.00e-170	591.00
IUUC-Acl-008253	Aspergillus clavatus	29.97	2.00e-42	166.00
IUUC-Afl-008519	Aspergillus flavus	34.60	4.00e-44	171.00
IUUC-Afu-008886	Aspergillus fumigatus	28.95	1.00e-37	149.00
IUUC-Ani-009275	Aspergillus nidulans	31.50	2.00e-42	165.00
IUUC-Ang-009862	Aspergillus niger	32.90	3.00e-44	171.00
IUUC-Ate-010247	Aspergillus terreus	30.82	5.00e-41	160.00
IUUC-Ame-010828	Astyanax mexicanus	51.48	5.00e-95	339.00
IUUC-Bgr-012163	Blumeria graminis	31.17	4.00e-35	140.00
IUUC-Bta-013514	Bos taurus	45.03	4.00e-79	287.00
IUUC-Bci-013639	Botrytis cinerea	30.04	6.00e-43	167.00
IUUC-Bdi-015049	Brachypodium distachyon	77.00	4.00e-148	516.00
IUUC-Bol-015401	Brassica oleracea	85.05	5.00e-166	575.00
IUUC-Bra-017867	Brassica rapa	85.36	2.00e-166	577.00
IUUC-Cel-018699	Caenorhabditis elegans	29.64	2.00e-34	139.00
IUUC-Cja-019591	Callithrix jacchus	51.32	2.00e-94	338.00
IUUC-Cfa-020692	Canis familiaris	51.32	2.00e-94	338.00
IUUC-Cpo-022135	Cavia porcellus	44.59	9.00e-74	269.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	34.63	3.00e-47	181.00
IUUC-Csa-023408	Chlorocebus sabaeus	51.32	2.00e-94	337.00
IUUC-Cho-024340	Choloepus hoffmanni	48.77	1.00e-57	214.00
IUUC-Cin-025418	Ciona intestinalis	54.14	4.00e-43	165.00
IUUC-Csv-026130	Ciona savignyi	53.80	2.00e-100	358.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	32.58	6.00e-47	180.00
IUUC-Cne-026775	Cryptococcus neoformans	43.27	4.00e-22	99.00
IUUC-Dre-028634	Danio rerio	51.48	9.00e-95	338.00
IUUC-Dno-029449	Dasypus novemcinctus	51.32	2.00e-94	337.00
IUUC-Dor-030301	Dipodomys ordii	55.48	7.00e-53	199.00
IUUC-Dse-031341	Dothistroma septosporum	29.47	4.00e-35	140.00
IUUC-Dme-031674	Drosophila melanogaster	50.16	2.00e-83	301.00
IUUC-Ete-033136	Echinops telfairi	50.99	3.00e-93	334.00
IUUC-Eca-034432	Equus caballus	46.23	5.00e-83	300.00
IUUC-Fca-035694	Felis catus	51.32	2.00e-94	338.00
IUUC-Fal-037328	Ficedula albicollis	51.48	1.00e-95	342.00
IUUC-Fox-037894	Fusarium oxysporum	32.10	2.00e-49	188.00
IUUC-Fso-038266	Fusarium solani	30.61	4.00e-45	174.00
IUUC-Gmo-039617	Gadus morhua	51.15	2.00e-93	334.00
IUUC-Ggr-039819	Gaeumannomyces graminis	29.58	1.00e-38	152.00
IUUC-Gga-041164	Gallus gallus	51.48	4.00e-95	340.00
IUUC-Gac-042407	Gasterosteus aculeatus	50.80	8.00e-95	339.00
IUUC-Gma-043718	Glycine max	93.61	0.00e+00	624.00
IUUC-Ggo-044989	Gorilla gorilla	51.32	2.00e-94	337.00
IUUC-Hsa-046784	Homo sapiens	51.32	2.00e-94	338.00
IUUC-Hvu-047633	Hordeum vulgare	76.74	3.00e-102	363.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	37.83	3.00e-53	201.00
IUUC-Kpa-049182	Komagataella pastoris	24.58	6.00e-15	73.90
IUUC-Lch-049894	Latimeria chalumnae	50.82	2.00e-94	337.00
IUUC-Lpe-051061	Leersia perrieri	67.95	7.00e-123	432.00
IUUC-Loc-052424	Lepisosteus oculatus	50.80	2.00e-95	340.00
IUUC-Lma-053127	Leptosphaeria maculans	31.13	3.00e-46	179.00
IUUC-Laf-053396	Loxodonta africana	51.66	1.00e-94	338.00
IUUC-Mcc-055517	Macaca mulatta	51.32	2.00e-94	337.00
IUUC-Meu-056034	Macropus eugenii	51.32	4.00e-94	337.00
IUUC-Mor-057011	Magnaporthe oryzae	28.12	2.00e-26	112.00
IUUC-Mpo-057490	Magnaporthe poae	29.49	1.00e-38	152.00
IUUC-Mtr-057927	Medicago truncatula	91.69	3.00e-176	609.00
IUUC-Mla-058945	Melampsora laricipopulina	37.88	5.00e-49	186.00
IUUC-Mga-060155	Meleagris gallopavo	54.20	5.00e-80	289.00
IUUC-Mvi-060344	Microbotryum violaceum	32.05	2.00e-44	172.00
IUUC-Mmr-060834	Microcebus murinus	51.32	3.00e-94	337.00
IUUC-Mdo-062587	Monodelphis domestica	51.32	2.00e-94	337.00
IUUC-Mmu-063395	Mus musculus	51.32	2.00e-94	338.00
IUUC-Mac-064579	Musa acuminata	86.54	3.00e-168	582.00
IUUC-Mpu-066688	Mustela putorius furo	54.55	2.00e-85	308.00
IUUC-Mlu-067299	Myotis lucifugus	51.32	4.00e-94	337.00
IUUC-Nfi-068562	Neosartorya fischeri	30.24	6.00e-40	157.00
IUUC-Ncr-068654	Neurospora crassa	30.49	1.00e-39	155.00
IUUC-Nle-069736	Nomascus leucogenys	50.66	5.00e-92	330.00
IUUC-Ont-071763	Oreochromis niloticus	50.80	2.00e-95	341.00
IUUC-Ocu-074909	Oryctolagus cuniculus	51.32	2.00e-94	338.00
IUUC-Oba-075902	Oryza barthii	68.06	3.00e-123	433.00
IUUC-Obr-076613	Oryza brachyantha	75.81	1.00e-143	501.00
IUUC-Ogl-077009	Oryza glaberrima	75.81	6.00e-144	502.00
IUUC-Ogu-078344	Oryza glumaepatula	68.06	3.00e-123	433.00
IUUC-Oin-079773	Oryza indica	75.81	6.00e-144	502.00
IUUC-Olo-080474	Oryza longistaminata	69.95	4.00e-82	296.00
IUUC-Ome-081837	Oryza meridionalis	65.66	3.00e-58	216.00
IUUC-Oni-082263	Oryza nivara	68.06	3.00e-123	433.00
IUUC-Opu-083813	Oryza punctata	76.13	1.00e-144	504.00
IUUC-Oru-084610	Oryza rufipogon	68.06	4.00e-123	433.00
IUUC-Osa-085415	Oryza sativa	75.48	2.00e-143	500.00
IUUC-Ola-086659	Oryzias latipes	51.12	2.00e-95	341.00
IUUC-Olu-087649	Ostreococcus lucimarinus	41.92	5.00e-64	236.00
IUUC-Oga-087923	Otolemur garnettii	50.99	5.00e-94	336.00
IUUC-Oar-089688	Ovis aries	50.99	8.00e-93	332.00
IUUC-Ptr-091628	Pan troglodytes	51.32	2.00e-94	338.00
IUUC-Pan-092586	Papio anubis	50.82	1.00e-92	332.00
IUUC-Psi-093701	Pelodiscus sinensis	52.33	5.00e-62	229.00
IUUC-Pma-094465	Petromyzon marinus	50.82	3.00e-92	330.00
IUUC-Pno-094767	Phaeosphaeria nodorum	31.73	1.00e-43	170.00
IUUC-Ppa-095195	Physcomitrella patens	85.25	3.00e-162	563.00
IUUC-Pfo-097383	Poecilia formosa	51.15	2.00e-94	338.00
IUUC-Pab-098669	Pongo abelii	51.32	2.00e-94	338.00
IUUC-Pop-099409	Populus trichocarpa	92.65	2.00e-180	623.00
IUUC-Pca-100769	Procavia capensis	45.10	1.00e-73	269.00
IUUC-Ppe-101321	Prunus persica	91.40	6.00e-175	605.00
IUUC-Pva-102759	Pteropus vampyrus	51.32	2.00e-94	338.00
IUUC-Pgr-103535	Puccinia graminis	38.46	7.00e-55	206.00
IUUC-Ptt-103820	Puccinia triticina	38.14	1.00e-54	205.00
IUUC-Pte-104271	Pyrenophora teres	31.39	3.00e-40	157.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	32.10	9.00e-38	150.00
IUUC-Rno-106126	Rattus norvegicus	51.32	1.00e-94	338.00
IUUC-Sce-106455	Saccharomyces cerevisiae	21.27	2.00e-11	62.40
IUUC-Sha-107146	Sarcophilus harrisii	50.33	2.00e-91	328.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	36.24	5.00e-56	210.00
IUUC-Spo-108324	Schizosaccharomyces pombe	34.63	5.00e-55	206.00
IUUC-Smo-108990	Selaginella moellendorffii	79.94	2.00e-156	543.00
IUUC-Sit-110773	Setaria italica	76.22	3.00e-141	493.00
IUUC-Sly-111619	Solanum lycopersicum	90.73	3.00e-176	609.00
IUUC-Stu-112241	Solanum tuberosum	90.42	5.00e-175	605.00
IUUC-Sbi-114842	Sorghum bicolor	75.90	3.00e-140	490.00
IUUC-Sre-115070	Sporisorium reilianum	33.63	2.00e-49	189.00
IUUC-Ssc-115581	Sus scrofa	51.32	2.00e-94	338.00
IUUC-Tgu-117354	Taeniopygia guttata	51.88	5.00e-92	330.00
IUUC-Tru-117745	Takifugu rubripes	49.68	1.00e-92	332.00
IUUC-Tni-120050	Tetraodon nigroviridis	49.36	5.00e-91	326.00
IUUC-Tca-121279	Theobroma cacao	94.57	0.00e+00	628.00
IUUC-Tre-121952	Trichoderma reesei	32.92	4.00e-50	190.00
IUUC-Tvi-122581	Trichoderma virens	32.92	5.00e-51	193.00
IUUC-Tae-125697	Triticum aestivum	76.04	5.00e-147	512.00
IUUC-Tur-126279	Triticum urartu	73.63	2.00e-141	494.00
IUUC-Tme-127000	Tuber melanosporum	30.62	3.00e-40	157.00
IUUC-Ttr-128405	Tursiops truncatus	51.55	7.00e-82	295.00
IUUC-Uma-129547	Ustilago maydis	35.59	3.00e-50	191.00
IUUC-Vda-129689	Verticillium dahliae	31.19	9.00e-40	156.00
IUUC-Xtr-132136	Xenopus tropicalis	49.68	2.00e-91	328.00
IUUC-Xma-133767	Xiphophorus maculatus	50.48	2.00e-94	338.00
IUUC-Yli-134522	Yarrowia lipolytica	27.65	2.00e-30	125.00
IUUC-Zma-135816	Zea mays	73.94	1.00e-137	481.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence