iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019420

UUCD1 version

UUC-CaJ-00230

Ensembl Protein ID

ENSCJAP00000028811.1

UniProt Accession

F6XZS0; F6XZS0_CALJA

Genbank Protein ID

JAB21138.1; JAB24924.1

Protein Name

E3 ubiquitin-protein ligase RNF180 isoform 1

Genbank Nucleotide ID

ACFV01017368; GAMR01009008

Gene Name

RNF180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000015644.3	ENSCJAT00000030443.1	ENSCJAP00000028811.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	94.29	0.00e+00	1088.00	IUUC-Hsa-045752

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MKRSEELITK NHSQEETSIL RCWKCRKCIA SSGCFMEYLE NQVIEDIHDS VDAQNICHVW 60
HMNTEALPEW INCLIQKAQW TVGKLNCPFC GARLGGFNFV STPKCSCGQL AAVHLSKSRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCGGCATC GCAGCCGCCG GAGCCGTGGC GGGTCTTCAG AGCCTGGCTG CTAGCGGCCG 60
GGAGCGCCGG GACGGGGCGC GAAGCCTGCG GCTCCAGGAC GCGGACACAG GTAAAGGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR033263--RNF180
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0031227--C:intrinsic component of endoplasmic reticulum membrane
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030534--P:adult behavior
GO:0042415--P:norepinephrine metabolic process
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0000209--P:protein polyubiquitination
GO:0050790--P:regulation of catalytic activity
GO:0042428--P:serotonin metabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002250	Ailuropoda melanoleuca	85.47	0.00e+00	1005.00
IUUC-Apl-003598	Anas platyrhynchos	52.10	2.00e-147	516.00
IUUC-Aca-004364	Anolis carolinensis	47.85	4.00e-140	491.00
IUUC-Ame-011498	Astyanax mexicanus	66.07	1.00e-68	252.00
IUUC-Bta-012990	Bos taurus	84.95	0.00e+00	1010.00
IUUC-Bci-013759	Botrytis cinerea	26.92	1.00e-03	38.10
IUUC-Cfa-020028	Canis familiaris	86.33	0.00e+00	1025.00
IUUC-Cpo-021698	Cavia porcellus	80.62	0.00e+00	786.00
IUUC-Csa-023637	Chlorocebus sabaeus	93.08	0.00e+00	1073.00
IUUC-Cho-025073	Choloepus hoffmanni	73.09	0.00e+00	832.00
IUUC-Dre-027523	Danio rerio	71.71	2.00e-69	256.00
IUUC-Dno-030040	Dasypus novemcinctus	79.96	0.00e+00	756.00
IUUC-Dor-030405	Dipodomys ordii	84.97	0.00e+00	971.00
IUUC-Eca-033366	Equus caballus	88.75	0.00e+00	1072.00
IUUC-Fca-035526	Felis catus	87.50	0.00e+00	796.00
IUUC-Fal-037590	Ficedula albicollis	48.25	6.00e-140	490.00
IUUC-Gmo-039484	Gadus morhua	52.63	6.00e-44	171.00
IUUC-Gga-040136	Gallus gallus	49.91	4.00e-148	518.00
IUUC-Gac-041811	Gasterosteus aculeatus	50.31	2.00e-42	166.00
IUUC-Ggo-044673	Gorilla gorilla	93.94	0.00e+00	1086.00
IUUC-Hsa-045752	Homo sapiens	94.29	0.00e+00	1088.00
IUUC-Itr-047971	Ictidomys tridecemlineatus	88.06	0.00e+00	1048.00
IUUC-Lch-050309	Latimeria chalumnae	47.84	2.00e-129	456.00
IUUC-Loc-052203	Lepisosteus oculatus	44.50	1.00e-118	420.00
IUUC-Laf-053398	Loxodonta africana	84.95	0.00e+00	1006.00
IUUC-Mcc-054745	Macaca mulatta	96.02	0.00e+00	1109.00
IUUC-Mmr-060583	Microcebus murinus	90.83	0.00e+00	1082.00
IUUC-Mdo-062873	Monodelphis domestica	69.36	0.00e+00	759.00
IUUC-Mmu-063393	Mus musculus	79.55	0.00e+00	782.00
IUUC-Mpu-066186	Mustela putorius furo	84.28	0.00e+00	994.00
IUUC-Mlu-068079	Myotis lucifugus	82.93	0.00e+00	978.00
IUUC-Nle-069164	Nomascus leucogenys	94.98	0.00e+00	1095.00
IUUC-Opr-070362	Ochotona princeps	77.70	0.00e+00	881.00
IUUC-Oan-073509	Ornithorhynchus anatinus	48.44	8.00e-54	203.00
IUUC-Ocu-073894	Oryctolagus cuniculus	78.01	0.00e+00	723.00
IUUC-Oga-088485	Otolemur garnettii	89.62	0.00e+00	1025.00
IUUC-Oar-089831	Ovis aries	84.95	0.00e+00	1011.00
IUUC-Ptr-091570	Pan troglodytes	94.46	0.00e+00	1092.00
IUUC-Psi-093962	Pelodiscus sinensis	55.86	8.00e-178	616.00
IUUC-Pfo-096369	Poecilia formosa	67.92	1.00e-63	236.00
IUUC-Pab-098224	Pongo abelii	77.85	0.00e+00	831.00
IUUC-Pca-100186	Procavia capensis	77.85	0.00e+00	857.00
IUUC-Pva-102511	Pteropus vampyrus	89.10	0.00e+00	1064.00
IUUC-Rno-105170	Rattus norvegicus	79.27	0.00e+00	898.00
IUUC-Sha-107501	Sarcophilus harrisii	70.67	0.00e+00	708.00
IUUC-Ssc-115668	Sus scrofa	85.71	0.00e+00	919.00
IUUC-Tgu-117098	Taeniopygia guttata	50.00	3.00e-137	481.00
IUUC-Tru-118625	Takifugu rubripes	69.39	2.00e-62	231.00
IUUC-Tsy-118959	Tarsius syrichta	89.62	0.00e+00	1024.00
IUUC-Tni-120324	Tetraodon nigroviridis	33.02	2.00e-59	223.00
IUUC-Tbe-127448	Tupaia belangeri	85.74	0.00e+00	879.00
IUUC-Ttr-128470	Tursiops truncatus	85.12	0.00e+00	975.00
IUUC-Vpa-130097	Vicugna pacos	85.93	0.00e+00	941.00
IUUC-Xtr-132848	Xenopus tropicalis	41.37	1.00e-113	403.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence