iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036679

Ensembl Protein ID

ENSFALP00000005672.1

UniProt Accession

U3JSB8; U3JSB8_FICAL

Genbank Protein ID

ENSFALP00000005672

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01011137

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000005453.1	ENSFALT00000005699.1	ENSFALP00000005672.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.50e-09	35.9	33	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 33   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 89
           *************************744445557779999888889**********8 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MPQEKLGMST SLSYKSFSKE QQTMDNLEKQ LICPICLEMF TKPVVILPCQ HNLCRKCASD 60
IFQASNPYLP TRGGTTVASG GRFRCPSCRH EVVLDRHGVY GLQRNLLVEN IIDIYKQEST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATATTTCAC ACCTTGGAAA GGCAGGATCC TGGATTCTGC CAAAATACAT GGGCAAGAGG 60
ATATCCTGCC TTTCGTGGCC ACGGCTGCTG GCTCACAACA GAATGCCTGT TAGGCTGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	71.60	0.00e+00	674.00
IUUC-Apl-003341	Anas platyrhynchos	82.34	0.00e+00	742.00
IUUC-Aca-005384	Anolis carolinensis	72.04	0.00e+00	687.00
IUUC-Ame-010720	Astyanax mexicanus	73.42	5.00e-141	493.00
IUUC-Bta-013040	Bos taurus	89.12	0.00e+00	632.00
IUUC-Cja-019932	Callithrix jacchus	72.78	0.00e+00	680.00
IUUC-Cfa-020450	Canis familiaris	71.10	0.00e+00	699.00
IUUC-Cpo-021767	Cavia porcellus	70.12	0.00e+00	680.00
IUUC-Csa-023600	Chlorocebus sabaeus	69.87	0.00e+00	677.00
IUUC-Cho-024753	Choloepus hoffmanni	85.37	5.00e-170	590.00
IUUC-Dre-028701	Danio rerio	71.52	4.00e-139	487.00
IUUC-Dno-030008	Dasypus novemcinctus	88.82	0.00e+00	631.00
IUUC-Ete-032274	Echinops telfairi	80.18	8.00e-162	563.00
IUUC-Eca-034326	Equus caballus	70.66	0.00e+00	652.00
IUUC-Fca-035385	Felis catus	69.33	1.00e-179	622.00
IUUC-Gmo-039021	Gadus morhua	65.51	4.00e-122	430.00
IUUC-Gga-040576	Gallus gallus	97.52	0.00e+00	657.00
IUUC-Gac-042165	Gasterosteus aculeatus	68.45	4.00e-133	467.00
IUUC-Ggo-044496	Gorilla gorilla	89.88	0.00e+00	634.00
IUUC-Hsa-046337	Homo sapiens	89.33	0.00e+00	634.00
IUUC-Lch-050504	Latimeria chalumnae	66.17	0.00e+00	661.00
IUUC-Loc-052717	Lepisosteus oculatus	62.75	8.00e-157	546.00
IUUC-Laf-053838	Loxodonta africana	68.47	0.00e+00	700.00
IUUC-Mcc-054690	Macaca mulatta	88.41	0.00e+00	629.00
IUUC-Meu-056782	Macropus eugenii	63.99	6.00e-170	590.00
IUUC-Mga-060112	Meleagris gallopavo	83.17	0.00e+00	702.00
IUUC-Mmr-061229	Microcebus murinus	71.29	0.00e+00	676.00
IUUC-Mdo-062397	Monodelphis domestica	73.32	0.00e+00	647.00
IUUC-Mmu-063764	Mus musculus	71.40	0.00e+00	681.00
IUUC-Mpu-066503	Mustela putorius furo	72.20	0.00e+00	681.00
IUUC-Nle-069170	Nomascus leucogenys	89.33	0.00e+00	634.00
IUUC-Ont-072082	Oreochromis niloticus	67.52	4.00e-132	464.00
IUUC-Oan-072715	Ornithorhynchus anatinus	71.91	0.00e+00	638.00
IUUC-Ocu-074747	Oryctolagus cuniculus	89.94	0.00e+00	639.00
IUUC-Ola-086646	Oryzias latipes	63.11	1.00e-126	445.00
IUUC-Oga-087995	Otolemur garnettii	70.98	0.00e+00	674.00
IUUC-Oar-089844	Ovis aries	69.90	0.00e+00	661.00
IUUC-Ptr-091556	Pan troglodytes	89.88	0.00e+00	635.00
IUUC-Pan-092224	Papio anubis	89.26	0.00e+00	631.00
IUUC-Psi-093856	Pelodiscus sinensis	78.82	0.00e+00	716.00
IUUC-Pma-094534	Petromyzon marinus	53.85	1.00e-101	362.00
IUUC-Pfo-096596	Poecilia formosa	62.72	5.00e-130	457.00
IUUC-Pca-100510	Procavia capensis	70.63	0.00e+00	660.00
IUUC-Pva-102962	Pteropus vampyrus	88.41	2.00e-168	585.00
IUUC-Ptt-103920	Puccinia triticina	30.12	1.00e-05	43.50
IUUC-Rno-105696	Rattus norvegicus	71.79	0.00e+00	669.00
IUUC-Sha-106825	Sarcophilus harrisii	73.11	0.00e+00	653.00
IUUC-Ssc-116332	Sus scrofa	89.94	0.00e+00	637.00
IUUC-Tgu-117208	Taeniopygia guttata	94.50	0.00e+00	813.00
IUUC-Tru-118744	Takifugu rubripes	68.75	2.00e-133	468.00
IUUC-Tsy-119352	Tarsius syrichta	69.87	0.00e+00	682.00
IUUC-Tni-120413	Tetraodon nigroviridis	69.01	5.00e-131	460.00
IUUC-Tbe-127821	Tupaia belangeri	92.54	3.00e-116	411.00
IUUC-Ttr-128545	Tursiops truncatus	73.52	0.00e+00	634.00
IUUC-Vpa-130699	Vicugna pacos	89.33	0.00e+00	637.00
IUUC-Xtr-132207	Xenopus tropicalis	63.48	0.00e+00	629.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence