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Tag Content
iUUCD ID IUUC-Dre-028006
Ensembl Protein ID ENSDARP00000131772.1
UniProt Accession A0A0R4IFU9; A0A0R4IFU9_DANRE
Genbank Protein ID ENSDARP00000131772
Protein Name Apoptotic protease-activating factor 1
Genbank Nucleotide ID BX890574
Gene Name apaf1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000021239.9 ENSDART00000019165.7 ENSDARP00000008347.6
ENSDARG00000021239.9 ENSDART00000157894.1 ENSDARP00000131772.1
ENSDARG00000021239.9 ENSDART00000113507.2 ENSDARP00000097917.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-53 177.4 658 695
UBD/Beta-Prp 8.50e-87 292.0 1015 1271
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H+++v c+af +d +++++++ D+++k+W++ +gvl++
   Q: 658 HEEDVLCCAFsPDdRHIATCASDKKVKLWNVERGVLIR 695
    99*********777*******************99876 PP
   


   UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.. 104
    + + ++a g ++gt++v +v + k+ +lsgh+++v ++f +d +il+t+seD ti+vw +tg+c+ +l+gh + v+ ++
   Q: 1015 QRDFVMALGLETGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVWKWRTGECM-VLQGHMEPVRKFHLLSss 1100
    66678999***********************************************************5.79*********9998875 PP
   S: 105 sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
    s+ +l s s d t++vwdl gq l+ l h+g+v + v++dg+l+++ s++rt ++W++++ k++ l+g h+d v+s f+ +
   Q: 1101 SSPRLFSWSFDGTVKVWDLTRGQMLQ-DLVCHEGAVLSCDVSSDGRLFATTSANRTAKVWSSASWKMIFLLEG-HKDCVRSCRFSWD 1185
    66************************.99*******************************************9.************* PP
   S: 192 gkelvsgsldgtvklwdlqtgecvrtlnght.........dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvis 269
    k+l++g+++g ++lw++ g ++++ t +v++++fsp++ lvs++ g i+ W ++sg+ l+t+ ++ +
   Q: 1186 NKRLATGDDNGEIRLWSMLDGALLKICSRDTkdsmdsyhgGWVTDLHFSPDNRVLVSTG--GYIKWWSVESGEALQTFYTMGGNLKK 1270
    *******************777777776666667777777*******************..****************9766555555 PP
   S: 270 v 270
    +
   Q: 1271 I 1271
    5 PP
   

Organism Danio rerio
Protein Sequence
(Fasta)
MEERARSRLL RSKATLEQDI KASYLMDHMI SDGVLTNDEE AKVLSKATRK EQAVALLETL 60
LRKDNRAYIS FYNALIRESY GDLASLLHSD LPLLSPEGEK SFADGVSPSV QAILSVGGVP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Dre-028006|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTGTTTGTGT CGAAAAAGCA GGAAGCGCAA ATTTTAAAGG GCGGACAATT GGCTTTTTAA 60
TAACTATTTT CCTTTACAAT ATATCGCGAA AAGTAACTGG TCTCAGTACA GCAGACAATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Dre-028006|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001315--CARD
IPR011029--DEATH-like_dom
IPR020472--G-protein_beta_WD-40_rep
IPR002182--NB-ARC
IPR027417--P-loop_NTPase
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50209--CARD
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00619--CARD
PF00931--NB-ARC
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0043531--F:ADP binding
GO:0042981--P:regulation of apoptotic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001432 Ailuropoda melanoleuca 53.38 0.00e+00 1395.00
IUUC-Apl-004201 Anas platyrhynchos 53.66 0.00e+00 1424.00
IUUC-Aca-004638 Anolis carolinensis 52.69 0.00e+00 1424.00
IUUC-Ame-011062 Astyanax mexicanus 75.42 0.00e+00 1981.00
IUUC-Bta-012865 Bos taurus 53.66 0.00e+00 1434.00
IUUC-Cja-018815 Callithrix jacchus 56.00 0.00e+00 1034.00
IUUC-Cfa-020222 Canis familiaris 51.37 0.00e+00 1318.00
IUUC-Cpo-021524 Cavia porcellus 53.66 0.00e+00 1417.00
IUUC-Cre-022958 Chlamydomonas reinhardtii 21.43 1.00e-23 106.00
IUUC-Csa-023861 Chlorocebus sabaeus 53.50 0.00e+00 1414.00
IUUC-Cho-024484 Choloepus hoffmanni 44.21 0.00e+00 667.00
IUUC-Dno-029591 Dasypus novemcinctus 53.89 0.00e+00 1435.00
IUUC-Dor-030237 Dipodomys ordii 43.44 6.00e-172 598.00
IUUC-Ete-032620 Echinops telfairi 51.69 0.00e+00 651.00
IUUC-Eca-033569 Equus caballus 53.96 0.00e+00 1409.00
IUUC-Eeu-035354 Erinaceus europaeus 51.56 1.00e-89 325.00
IUUC-Fca-036337 Felis catus 53.69 0.00e+00 1424.00
IUUC-Fal-037077 Ficedula albicollis 52.85 0.00e+00 1410.00
IUUC-Gmo-039687 Gadus morhua 61.49 0.00e+00 1182.00
IUUC-Gga-040299 Gallus gallus 52.47 0.00e+00 1415.00
IUUC-Gac-041762 Gasterosteus aculeatus 63.26 0.00e+00 1648.00
IUUC-Ggo-045563 Gorilla gorilla 53.66 0.00e+00 1422.00
IUUC-Hsa-046771 Homo sapiens 53.43 0.00e+00 1417.00
IUUC-Lch-050200 Latimeria chalumnae 56.75 0.00e+00 1461.00
IUUC-Loc-052090 Lepisosteus oculatus 64.95 0.00e+00 1697.00
IUUC-Laf-053861 Loxodonta africana 54.31 0.00e+00 1421.00
IUUC-Mcc-055543 Macaca mulatta 53.66 0.00e+00 1421.00
IUUC-Meu-056688 Macropus eugenii 54.43 0.00e+00 1409.00
IUUC-Mga-059243 Meleagris gallopavo 52.46 0.00e+00 1415.00
IUUC-Mmr-061134 Microcebus murinus 49.66 0.00e+00 1162.00
IUUC-Mdo-062913 Monodelphis domestica 54.50 0.00e+00 1417.00
IUUC-Mmu-063811 Mus musculus 53.66 0.00e+00 1427.00
IUUC-Mpu-066780 Mustela putorius furo 53.38 0.00e+00 1388.00
IUUC-Mlu-067276 Myotis lucifugus 54.08 0.00e+00 1427.00
IUUC-Nle-069129 Nomascus leucogenys 53.35 0.00e+00 1410.00
IUUC-Opr-071007 Ochotona princeps 40.20 1.00e-180 627.00
IUUC-Ont-071348 Oreochromis niloticus 66.98 0.00e+00 1787.00
IUUC-Oan-072717 Ornithorhynchus anatinus 55.20 0.00e+00 1477.00
IUUC-Ocu-074286 Oryctolagus cuniculus 53.31 0.00e+00 1196.00
IUUC-Ola-086895 Oryzias latipes 59.28 0.00e+00 1499.00
IUUC-Oga-088678 Otolemur garnettii 53.96 0.00e+00 1423.00
IUUC-Oar-089359 Ovis aries 54.04 0.00e+00 1435.00
IUUC-Ptr-091062 Pan troglodytes 53.58 0.00e+00 1420.00
IUUC-Pan-092528 Papio anubis 58.18 0.00e+00 881.00
IUUC-Psi-093430 Pelodiscus sinensis 54.50 0.00e+00 1440.00
IUUC-Pma-094690 Petromyzon marinus 40.07 5.00e-154 538.00
IUUC-Pfo-097204 Poecilia formosa 65.38 0.00e+00 1736.00
IUUC-Pab-097690 Pongo abelii 53.66 0.00e+00 1420.00
IUUC-Pca-100778 Procavia capensis 41.69 0.00e+00 672.00
IUUC-Pva-102870 Pteropus vampyrus 52.65 0.00e+00 1280.00
IUUC-Rno-104889 Rattus norvegicus 53.66 0.00e+00 1402.00
IUUC-Sha-107465 Sarcophilus harrisii 53.69 0.00e+00 1422.00
IUUC-Sar-113268 Sorex araneus 52.97 2.00e-107 384.00
IUUC-Ssc-115654 Sus scrofa 53.43 0.00e+00 1431.00
IUUC-Tgu-117302 Taeniopygia guttata 53.24 0.00e+00 1416.00
IUUC-Tru-118363 Takifugu rubripes 67.62 0.00e+00 1792.00
IUUC-Tsy-119007 Tarsius syrichta 51.35 0.00e+00 1343.00
IUUC-Tni-120910 Tetraodon nigroviridis 66.46 0.00e+00 1723.00
IUUC-Tbe-127413 Tupaia belangeri 44.44 0.00e+00 813.00
IUUC-Ttr-129213 Tursiops truncatus 49.73 0.00e+00 1264.00
IUUC-Vpa-130146 Vicugna pacos 49.69 0.00e+00 949.00
IUUC-Xtr-132559 Xenopus tropicalis 48.50 0.00e+00 1295.00
Created Date 25-Jun-2017

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