iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Cel-018344

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

EARP-interacting protein 1; Endosome-associated recycling protein-interacting protein

Genbank Nucleotide ID

BX284601

Gene Name

Y87G2A.11; eipr-1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00013599	Y87G2A.11	Y87G2A.11

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-15	56.1	213	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf.sd..tllvsGsdDgtikvWDlrt 32
           +++f ++  + +++++dDg +++WD+r+
   Q: 213  SMDFnPNlqHVIATCGDDGYVRIWDTRS 240
           567776664569*************986 PP

Organism

Caenorhabditis elegans

Functional Description
(View)

Plays a role in the trafficking of cargo to dense-core vesicles, probably through association with the endosome-associated recycling protein (EARP) complex. Important for neuronal function.

Protein Sequence
(Fasta)

MSECLMFGMD CEARCMTSMT ADEENICFLV GTNNIKNDKN QVNKLFMDPE ASRLMSKTFR 60
HPAGEVRAIA AHPTKSTILA TCTADFSSLG GTHSITIWNI EEDKRTLETV SRLPTEQVMS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAATGAGTG AATGTTTAAT GTTCGGTATG GATTGTGAGG CGAGATGTAT GACGTCAATG 60
ACGGCTGACG AGGAGAATAT TTGCTTTTTA GTCGGAACGA ATAATATTAA AAACGACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:1904811--P:positive regulation of dense core granule transport
GO:0090326--P:positive regulation of locomotion involved in locomotory behavior
GO:1901046--P:positive regulation of oviposition

KEGG

cel:CELE_Y87G2A.11

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	26.15	4.00e-21	94.00
IUUC-Aml-002348	Ailuropoda melanoleuca	43.94	2.00e-42	164.00
IUUC-Atr-003028	Amborella trichopoda	31.28	2.00e-38	151.00
IUUC-Apl-004211	Anas platyrhynchos	32.01	4.00e-49	187.00
IUUC-Aca-004893	Anolis carolinensis	34.91	1.00e-55	208.00
IUUC-Aly-005975	Arabidopsis lyrata	29.20	9.00e-36	142.00
IUUC-Ath-007527	Arabidopsis thaliana	30.17	2.00e-37	148.00
IUUC-Ame-010619	Astyanax mexicanus	33.60	1.00e-50	192.00
IUUC-Bta-013035	Bos taurus	33.25	2.00e-52	198.00
IUUC-Bdi-014619	Brachypodium distachyon	27.32	3.00e-33	134.00
IUUC-Bol-016581	Brassica oleracea	29.05	1.00e-37	149.00
IUUC-Bra-017467	Brassica rapa	29.89	1.00e-37	148.00
IUUC-Cja-018975	Callithrix jacchus	32.84	8.00e-53	199.00
IUUC-Cfa-020214	Canis familiaris	33.07	2.00e-51	195.00
IUUC-Cpo-021363	Cavia porcellus	34.38	1.00e-52	198.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	26.56	1.00e-22	99.00
IUUC-Csa-023240	Chlorocebus sabaeus	33.60	1.00e-52	198.00
IUUC-Cho-024713	Choloepus hoffmanni	43.94	8.00e-41	159.00
IUUC-Cin-025678	Ciona intestinalis	31.75	2.00e-53	201.00
IUUC-Csv-026022	Ciona savignyi	29.82	3.00e-49	187.00
IUUC-Dre-027817	Danio rerio	34.12	1.00e-54	205.00
IUUC-Dno-030097	Dasypus novemcinctus	33.86	4.00e-53	200.00
IUUC-Dme-031866	Drosophila melanogaster	33.51	6.00e-52	196.00
IUUC-Ete-032575	Echinops telfairi	50.00	5.00e-22	97.10
IUUC-Eca-034323	Equus caballus	26.49	3.00e-25	107.00
IUUC-Eeu-035217	Erinaceus europaeus	45.29	1.00e-37	149.00
IUUC-Fca-035709	Felis catus	32.34	2.00e-37	147.00
IUUC-Fal-036989	Ficedula albicollis	32.55	5.00e-53	200.00
IUUC-Gmo-038623	Gadus morhua	34.38	2.00e-52	198.00
IUUC-Gga-040157	Gallus gallus	34.91	4.00e-56	210.00
IUUC-Gac-041368	Gasterosteus aculeatus	23.63	2.00e-11	62.00
IUUC-Gma-044196	Glycine max	26.59	2.00e-35	141.00
IUUC-Ggo-044513	Gorilla gorilla	32.92	2.00e-50	191.00
IUUC-Hsa-046844	Homo sapiens	31.62	1.00e-49	189.00
IUUC-Hvu-047435	Hordeum vulgare	27.70	3.00e-33	134.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	45.18	5.00e-42	162.00
IUUC-Lch-049696	Latimeria chalumnae	34.65	2.00e-55	207.00
IUUC-Lpe-050988	Leersia perrieri	26.39	1.00e-21	95.90
IUUC-Loc-052440	Lepisosteus oculatus	33.86	2.00e-54	204.00
IUUC-Laf-054088	Loxodonta africana	34.21	2.00e-52	198.00
IUUC-Mcc-055575	Macaca mulatta	32.27	2.00e-49	188.00
IUUC-Meu-056807	Macropus eugenii	43.59	1.00e-40	159.00
IUUC-Mtr-058599	Medicago truncatula	26.80	6.00e-34	136.00
IUUC-Mga-059336	Meleagris gallopavo	33.59	4.00e-54	203.00
IUUC-Mmr-061706	Microcebus murinus	34.38	1.00e-53	202.00
IUUC-Mdo-062736	Monodelphis domestica	34.12	8.00e-52	196.00
IUUC-Mmu-064265	Mus musculus	34.21	1.00e-53	202.00
IUUC-Mac-065342	Musa acuminata	26.84	2.00e-34	138.00
IUUC-Mpu-066514	Mustela putorius furo	33.33	5.00e-54	203.00
IUUC-Mlu-067072	Myotis lucifugus	44.92	6.00e-40	155.00
IUUC-Nle-069307	Nomascus leucogenys	43.43	3.00e-42	164.00
IUUC-Opr-070283	Ochotona princeps	46.34	1.00e-36	145.00
IUUC-Ont-072532	Oreochromis niloticus	34.38	7.00e-52	196.00
IUUC-Oan-073222	Ornithorhynchus anatinus	32.74	2.00e-46	178.00
IUUC-Oba-075849	Oryza barthii	26.07	7.00e-25	107.00
IUUC-Obr-076488	Oryza brachyantha	25.94	2.00e-25	108.00
IUUC-Ogl-077928	Oryza glaberrima	25.98	3.00e-26	110.00
IUUC-Ogu-077997	Oryza glumaepatula	26.07	8.00e-25	106.00
IUUC-Oin-079848	Oryza indica	26.48	7.00e-25	106.00
IUUC-Oni-082492	Oryza nivara	26.07	7.00e-25	107.00
IUUC-Oru-085119	Oryza rufipogon	26.07	7.00e-25	107.00
IUUC-Osa-086152	Oryza sativa	26.83	2.00e-25	108.00
IUUC-Ola-086694	Oryzias latipes	32.20	3.00e-52	197.00
IUUC-Olu-087749	Ostreococcus lucimarinus	30.30	5.00e-22	95.90
IUUC-Oga-088180	Otolemur garnettii	43.94	6.00e-42	162.00
IUUC-Oar-089621	Ovis aries	29.31	9.00e-32	129.00
IUUC-Ptr-091053	Pan troglodytes	33.33	4.00e-50	190.00
IUUC-Pan-091918	Papio anubis	33.60	2.00e-52	198.00
IUUC-Psi-093545	Pelodiscus sinensis	32.37	1.00e-50	192.00
IUUC-Pma-094439	Petromyzon marinus	33.85	6.00e-45	173.00
IUUC-Pfo-096127	Poecilia formosa	34.38	2.00e-53	201.00
IUUC-Pab-097916	Pongo abelii	31.70	1.00e-47	182.00
IUUC-Pop-098864	Populus trichocarpa	26.89	2.00e-33	135.00
IUUC-Pca-100797	Procavia capensis	43.27	6.00e-42	163.00
IUUC-Ppe-101796	Prunus persica	28.57	3.00e-39	154.00
IUUC-Pva-103228	Pteropus vampyrus	44.95	6.00e-42	163.00
IUUC-Rno-104877	Rattus norvegicus	34.56	9.00e-53	199.00
IUUC-Sha-106940	Sarcophilus harrisii	33.77	2.00e-54	204.00
IUUC-Smo-109355	Selaginella moellendorffii	28.65	5.00e-38	150.00
IUUC-Sit-109958	Setaria italica	27.65	8.00e-33	133.00
IUUC-Sly-111871	Solanum lycopersicum	28.25	3.00e-34	137.00
IUUC-Stu-112128	Solanum tuberosum	28.21	1.00e-32	132.00
IUUC-Sbi-114122	Sorghum bicolor	26.32	1.00e-30	125.00
IUUC-Ssc-115385	Sus scrofa	33.68	9.00e-50	189.00
IUUC-Tgu-117090	Taeniopygia guttata	34.58	1.00e-50	192.00
IUUC-Tru-118548	Takifugu rubripes	31.48	2.00e-48	185.00
IUUC-Tsy-119435	Tarsius syrichta	31.86	2.00e-47	181.00
IUUC-Tni-120311	Tetraodon nigroviridis	30.03	4.00e-35	140.00
IUUC-Tca-121141	Theobroma cacao	26.89	3.00e-32	131.00
IUUC-Tae-122717	Triticum aestivum	27.42	4.00e-33	134.00
IUUC-Tbe-127623	Tupaia belangeri	50.89	1.00e-22	99.40
IUUC-Ttr-128706	Tursiops truncatus	26.12	2.00e-21	95.50
IUUC-Vvi-130871	Vitis vinifera	27.07	2.00e-29	122.00
IUUC-Xtr-131950	Xenopus tropicalis	33.33	4.00e-53	200.00
IUUC-Xma-133364	Xiphophorus maculatus	33.86	5.00e-52	197.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence