iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000020000.2	ENSCJAT00000039300.1	ENSCJAP00000037213.1
ENSCJAG00000020000.2	ENSCJAT00000039304.2	ENSCJAP00000037216.2
ENSCJAG00000020000.2	ENSCJAT00000039302.1	ENSCJAP00000037214.1
ENSCJAG00000020000.2	ENSCJAT00000039306.2	ENSCJAP00000037218.2
ENSCJAG00000020000.2	ENSCJAT00000039309.2	ENSCJAP00000037221.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-10	41.5	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d++l+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpcCDWFLATASVDQTVKIWDLRQ 274
           7888999999975559***************986 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAPKKRPETQ KTSKIVLRPR SKRSRSPREL EPEAKKLCAK GSGPSRRCDS DCLWAGLAGP 60
QILPPCRSIV RTLHQHKLGR ASWPSVQQGL QQSFLHTLDS YRILQKAAPF DRRATSLAWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCGAGACG GGTGGGGCCG GAGCTCCAAG CTGGTTTGAA CAAGCCTTGG GCATGTTTGG 60
CGGGAAGTCG GCTTAGCTCG GCTACCTATG GCCCCAGAGT TTTGTAGTCC CCGCCTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

KEGG

cjc:100390419

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.18	1.00e-30	127.00
IUUC-Aml-002203	Ailuropoda melanoleuca	86.38	0.00e+00	748.00
IUUC-Atr-002957	Amborella trichopoda	29.18	4.00e-34	139.00
IUUC-Apl-003832	Anas platyrhynchos	58.42	2.00e-123	436.00
IUUC-Aca-004358	Anolis carolinensis	51.88	5.00e-127	447.00
IUUC-Aly-006296	Arabidopsis lyrata	29.46	2.00e-33	137.00
IUUC-Ath-007115	Arabidopsis thaliana	29.46	9.00e-35	141.00
IUUC-Ame-010817	Astyanax mexicanus	50.50	2.00e-120	425.00
IUUC-Bta-012914	Bos taurus	84.78	0.00e+00	762.00
IUUC-Bdi-014261	Brachypodium distachyon	29.32	8.00e-31	128.00
IUUC-Bol-015317	Brassica oleracea	29.70	1.00e-34	141.00
IUUC-Bra-016848	Brassica rapa	29.70	1.00e-34	140.00
IUUC-Cfa-021238	Canis familiaris	86.38	0.00e+00	718.00
IUUC-Cpo-022063	Cavia porcellus	79.67	0.00e+00	702.00
IUUC-Csa-023382	Chlorocebus sabaeus	97.66	0.00e+00	877.00
IUUC-Cho-024805	Choloepus hoffmanni	58.52	7.00e-90	323.00
IUUC-Dre-028732	Danio rerio	47.66	2.00e-105	375.00
IUUC-Dor-030461	Dipodomys ordii	79.53	4.00e-124	437.00
IUUC-Ete-033038	Echinops telfairi	72.83	0.00e+00	645.00
IUUC-Eca-033772	Equus caballus	86.65	0.00e+00	719.00
IUUC-Eeu-034662	Erinaceus europaeus	63.32	8.00e-66	244.00
IUUC-Fca-036095	Felis catus	85.51	0.00e+00	723.00
IUUC-Gmo-039683	Gadus morhua	48.33	2.00e-104	372.00
IUUC-Gga-040530	Gallus gallus	59.24	1.00e-124	439.00
IUUC-Gac-041517	Gasterosteus aculeatus	48.49	1.00e-97	350.00
IUUC-Gma-043378	Glycine max	30.42	1.00e-37	150.00
IUUC-Ggo-045364	Gorilla gorilla	98.13	0.00e+00	881.00
IUUC-Hsa-046354	Homo sapiens	97.89	0.00e+00	879.00
IUUC-Hvu-047151	Hordeum vulgare	30.47	6.00e-28	117.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	86.40	0.00e+00	765.00
IUUC-Lpe-051256	Leersia perrieri	29.75	1.00e-30	128.00
IUUC-Loc-052398	Lepisosteus oculatus	52.53	9.00e-125	440.00
IUUC-Laf-053562	Loxodonta africana	83.84	0.00e+00	725.00
IUUC-Mcc-055197	Macaca mulatta	75.93	0.00e+00	634.00
IUUC-Meu-056151	Macropus eugenii	75.27	5.00e-121	426.00
IUUC-Mtr-057940	Medicago truncatula	30.18	3.00e-35	143.00
IUUC-Mga-059923	Meleagris gallopavo	59.24	2.00e-131	462.00
IUUC-Mmr-061465	Microcebus murinus	93.88	2.00e-160	558.00
IUUC-Mdo-063063	Monodelphis domestica	65.68	4.00e-160	557.00
IUUC-Mmu-064294	Mus musculus	77.99	0.00e+00	683.00
IUUC-Mac-065598	Musa acuminata	30.75	4.00e-32	132.00
IUUC-Mpu-066831	Mustela putorius furo	85.92	0.00e+00	747.00
IUUC-Mlu-067222	Myotis lucifugus	82.98	0.00e+00	735.00
IUUC-Nle-069581	Nomascus leucogenys	98.13	0.00e+00	882.00
IUUC-Opr-070644	Ochotona princeps	84.07	0.00e+00	733.00
IUUC-Ont-072605	Oreochromis niloticus	54.62	7.00e-115	407.00
IUUC-Oan-072973	Ornithorhynchus anatinus	70.47	2.00e-150	525.00
IUUC-Ocu-074615	Oryctolagus cuniculus	83.84	0.00e+00	761.00
IUUC-Oba-075283	Oryza barthii	29.32	1.00e-30	127.00
IUUC-Obr-076605	Oryza brachyantha	30.06	3.00e-32	133.00
IUUC-Ogl-077512	Oryza glaberrima	29.32	1.00e-30	128.00
IUUC-Ogu-078329	Oryza glumaepatula	29.32	1.00e-30	128.00
IUUC-Oin-079980	Oryza indica	29.32	1.00e-30	127.00
IUUC-Olo-080516	Oryza longistaminata	29.01	6.00e-31	128.00
IUUC-Ome-081415	Oryza meridionalis	29.32	1.00e-30	127.00
IUUC-Oni-082985	Oryza nivara	29.32	1.00e-30	127.00
IUUC-Opu-084159	Oryza punctata	29.63	6.00e-31	129.00
IUUC-Oru-085137	Oryza rufipogon	29.32	6.00e-31	129.00
IUUC-Osa-085614	Oryza sativa	29.32	5.00e-31	129.00
IUUC-Ola-087044	Oryzias latipes	46.15	7.00e-103	367.00
IUUC-Oga-088274	Otolemur garnettii	89.23	0.00e+00	783.00
IUUC-Oar-089826	Ovis aries	85.01	0.00e+00	770.00
IUUC-Ptr-091631	Pan troglodytes	97.89	0.00e+00	879.00
IUUC-Pan-092535	Papio anubis	98.13	0.00e+00	881.00
IUUC-Psi-093815	Pelodiscus sinensis	54.50	3.00e-124	438.00
IUUC-Pma-094474	Petromyzon marinus	48.05	9.00e-96	343.00
IUUC-Ppa-095414	Physcomitrella patens	26.67	3.00e-26	113.00
IUUC-Pfo-096559	Poecilia formosa	49.45	6.00e-102	364.00
IUUC-Pab-098528	Pongo abelii	98.36	0.00e+00	882.00
IUUC-Pop-100064	Populus trichocarpa	28.23	1.00e-33	138.00
IUUC-Pca-100803	Procavia capensis	81.03	0.00e+00	716.00
IUUC-Ppe-101966	Prunus persica	29.57	3.00e-35	143.00
IUUC-Pva-103213	Pteropus vampyrus	84.54	0.00e+00	717.00
IUUC-Rno-105087	Rattus norvegicus	78.44	0.00e+00	692.00
IUUC-Sha-107466	Sarcophilus harrisii	71.19	6.00e-155	540.00
IUUC-Smo-108958	Selaginella moellendorffii	27.16	3.00e-26	113.00
IUUC-Sit-109968	Setaria italica	28.70	3.00e-29	123.00
IUUC-Sly-111495	Solanum lycopersicum	29.85	2.00e-33	137.00
IUUC-Stu-112182	Solanum tuberosum	26.59	1.00e-13	71.60
IUUC-Sar-113272	Sorex araneus	77.58	1.00e-162	565.00
IUUC-Sbi-114706	Sorghum bicolor	27.19	3.00e-26	113.00
IUUC-Ssc-115437	Sus scrofa	86.65	0.00e+00	764.00
IUUC-Tgu-116602	Taeniopygia guttata	51.66	4.00e-122	431.00
IUUC-Tru-118698	Takifugu rubripes	49.30	1.00e-98	352.00
IUUC-Tsy-119027	Tarsius syrichta	87.89	0.00e+00	716.00
IUUC-Tni-119787	Tetraodon nigroviridis	48.60	8.00e-103	367.00
IUUC-Tca-121447	Theobroma cacao	29.13	4.00e-36	145.00
IUUC-Tae-123253	Triticum aestivum	29.32	5.00e-31	129.00
IUUC-Tur-126724	Triticum urartu	29.48	4.00e-31	129.00
IUUC-Tbe-127680	Tupaia belangeri	83.64	1.00e-138	485.00
IUUC-Ttr-128201	Tursiops truncatus	76.58	0.00e+00	650.00
IUUC-Vpa-130451	Vicugna pacos	69.96	4.00e-109	388.00
IUUC-Vvi-131001	Vitis vinifera	29.79	1.00e-35	144.00
IUUC-Xtr-132266	Xenopus tropicalis	61.56	5.00e-130	457.00
IUUC-Xma-133034	Xiphophorus maculatus	50.12	4.00e-114	404.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence