iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC ++f   ++ p+ l+CgHvf+++Cl ++ +       +  CP Cr
   Q: 63   CLICVSPFdgiFKLPKRLDCGHVFCLECLARLSLATAGGGDAVACPMCR 111
           ******9944422255566**********999777777888889****8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPCPRLPWLR RHRTSQGSSP GSPSTLSAPN FPSRGEDEDA EEEEGDGTPG SGPILPPASP 60
MECLICVSPF DGIFKLPKRL DCGHVFCLEC LARLSLATAG GGDAVACPMC RAPTRLAPRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAACTGAA GAGACGCTGT GATCCTACAC GAGGAGGTCT ACAGGTGGGT GTCTTGAAAG 60
TGGCCAGAGC CGGTCATTTC TGTTTGGGGA ATTCGTTCTA ACAGCTTGAG TTTACTACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

rno:502300

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003890	Anas platyrhynchos	50.00	3.00e-12	65.10
IUUC-Aca-005120	Anolis carolinensis	36.78	6.00e-07	47.40
IUUC-Ame-011796	Astyanax mexicanus	48.68	1.00e-13	70.10
IUUC-Bta-013148	Bos taurus	58.90	6.00e-16	77.40
IUUC-Cel-018624	Caenorhabditis elegans	36.05	4.00e-09	55.80
IUUC-Cja-019712	Callithrix jacchus	82.26	2.00e-54	205.00
IUUC-Cfa-020515	Canis familiaris	76.06	3.00e-67	248.00
IUUC-Cpo-022176	Cavia porcellus	57.53	1.00e-15	77.00
IUUC-Csa-023296	Chlorocebus sabaeus	72.73	8.00e-59	220.00
IUUC-Dre-028812	Danio rerio	41.00	3.00e-16	79.00
IUUC-Dno-029116	Dasypus novemcinctus	42.25	2.00e-08	52.00
IUUC-Dor-031130	Dipodomys ordii	59.46	3.00e-08	51.60
IUUC-Eca-034096	Equus caballus	56.96	5.00e-15	74.30
IUUC-Fca-036424	Felis catus	59.65	5.00e-14	68.60
IUUC-Gmo-038633	Gadus morhua	41.84	5.00e-17	79.00
IUUC-Gga-040232	Gallus gallus	52.56	2.00e-14	73.20
IUUC-Gac-042137	Gasterosteus aculeatus	46.00	7.00e-17	80.90
IUUC-Ggo-044823	Gorilla gorilla	92.59	1.00e-24	106.00
IUUC-Hsa-046242	Homo sapiens	76.65	7.00e-51	194.00
IUUC-Itr-048513	Ictidomys tridecemlineatus	42.25	1.00e-08	52.80
IUUC-Lch-050304	Latimeria chalumnae	43.14	5.00e-20	90.50
IUUC-Loc-052136	Lepisosteus oculatus	49.38	1.00e-13	69.70
IUUC-Laf-054336	Loxodonta africana	56.41	1.00e-15	77.00
IUUC-Mcc-055051	Macaca mulatta	61.64	2.00e-16	79.30
IUUC-Meu-056717	Macropus eugenii	43.66	4.00e-10	57.40
IUUC-Mga-060186	Meleagris gallopavo	52.56	2.00e-14	72.00
IUUC-Mmr-061708	Microcebus murinus	69.26	9.00e-62	230.00
IUUC-Mdo-062101	Monodelphis domestica	42.25	7.00e-10	57.00
IUUC-Mmu-063087	Mus musculus	89.49	7.00e-101	360.00
IUUC-Mpu-066249	Mustela putorius furo	57.83	4.00e-17	81.60
IUUC-Nle-069438	Nomascus leucogenys	72.30	8.00e-60	223.00
IUUC-Ont-071891	Oreochromis niloticus	44.00	3.00e-12	65.10
IUUC-Ocu-074595	Oryctolagus cuniculus	59.46	3.00e-08	51.60
IUUC-Ola-086363	Oryzias latipes	46.48	3.00e-13	67.80
IUUC-Oga-088916	Otolemur garnettii	63.06	1.00e-66	246.00
IUUC-Pan-091816	Papio anubis	60.27	3.00e-16	78.60
IUUC-Psi-093845	Pelodiscus sinensis	50.00	7.00e-13	67.40
IUUC-Pfo-097287	Poecilia formosa	45.00	4.00e-16	78.20
IUUC-Pab-098138	Pongo abelii	77.09	2.00e-49	189.00
IUUC-Sar-113158	Sorex araneus	46.48	1.00e-11	62.80
IUUC-Sre-115193	Sporisorium reilianum	43.06	3.00e-08	53.90
IUUC-Ssc-115834	Sus scrofa	42.25	4.00e-08	51.20
IUUC-Tgu-117099	Taeniopygia guttata	59.21	9.00e-19	86.30
IUUC-Tru-118029	Takifugu rubripes	40.82	2.00e-15	76.60
IUUC-Tni-119763	Tetraodon nigroviridis	45.45	2.00e-14	70.10
IUUC-Tvi-122382	Trichoderma virens	50.00	4.00e-04	38.90
IUUC-Tbe-128022	Tupaia belangeri	46.48	8.00e-09	51.60
IUUC-Ttr-128432	Tursiops truncatus	42.25	3.00e-08	51.60
IUUC-Uma-129518	Ustilago maydis	41.67	3.00e-07	50.80
IUUC-Vpa-130551	Vicugna pacos	42.25	1.00e-08	52.80
IUUC-Xtr-132792	Xenopus tropicalis	43.90	6.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence