iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131718

UUCD1 version

UUC-ViV-00368

Ensembl Protein ID

VIT_18s0001g13660.t01

UniProt Accession

E0CPJ0; E0CPJ0_VITVI

Genbank Protein ID

CBI19806.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

EMB2757; VIT_18s0001g13660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g13660	VIT_18s0001g13660.t01	VIT_18s0001g13660.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-22	77.6	15	52

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH +svt+++f ++  +l +Gs Dg +++WD+ +++ +
   Q: 15   GHRASVTDVCFhPSnSILFTGSSDGELRIWDTVQHRTV 52
           8***********55499**************9888765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSKRPPPDPV AVLRGHRASV TDVCFHPSNS ILFTGSSDGE LRIWDTVQHR TVSSAWVHSA 60
AHGVVCVAAS PLIGDNKLVS QGRDGTVKYW DIEEGGLSRS PSLTIKTNAY HFCKLSLMKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGGGTTAGG GTTTTAAGGG GGTTGAGACG GAGGAGGAAC AAGAGGGCAG AATGGGGATT 60
TTACATGCGT GTTTTAATTA ATCAATTAAA AAGGGCAGAA GGAAAGAGAG GGTGGGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0048700--P:acquisition of desiccation tolerance in seed
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031570--P:DNA integrity checkpoint
GO:0009793--P:embryo development ending in seed dormancy
GO:0048481--P:plant ovule development
GO:0009663--P:plasmodesma organization
GO:0010497--P:plasmodesmata-mediated intercellular transport
GO:0009555--P:pollen development
GO:0071158--P:positive regulation of cell cycle arrest
GO:0006282--P:regulation of DNA repair
GO:2000280--P:regulation of root development
GO:0010044--P:response to aluminum ion
GO:0072718--P:response to cisplatin

KEGG

vvi:100252237

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000703	Aegilops tauschii	48.31	9.00e-105	372.00
IUUC-Aml-001556	Ailuropoda melanoleuca	27.41	3.00e-34	137.00
IUUC-Atr-002691	Amborella trichopoda	58.21	3.00e-133	467.00
IUUC-Apl-003227	Anas platyrhynchos	30.08	6.00e-38	150.00
IUUC-Aly-006168	Arabidopsis lyrata	66.15	9.00e-154	535.00
IUUC-Ath-007145	Arabidopsis thaliana	65.80	4.00e-152	530.00
IUUC-Acl-008132	Aspergillus clavatus	22.87	2.00e-16	79.00
IUUC-Afl-008655	Aspergillus flavus	25.12	1.00e-21	96.70
IUUC-Afu-008778	Aspergillus fumigatus	24.82	5.00e-23	101.00
IUUC-Ang-009760	Aspergillus niger	24.43	1.00e-17	83.20
IUUC-Bgr-012119	Blumeria graminis	27.15	6.00e-24	104.00
IUUC-Bta-012556	Bos taurus	29.72	3.00e-35	141.00
IUUC-Bdi-014151	Brachypodium distachyon	55.38	2.00e-118	417.00
IUUC-Bol-016319	Brassica oleracea	65.54	2.00e-151	527.00
IUUC-Bra-016675	Brassica rapa	65.54	7.00e-152	528.00
IUUC-Cja-019523	Callithrix jacchus	27.97	5.00e-33	134.00
IUUC-Cfa-021217	Canis familiaris	26.04	3.00e-29	121.00
IUUC-Cpo-021506	Cavia porcellus	27.56	2.00e-30	125.00
IUUC-Csa-023674	Chlorocebus sabaeus	27.63	7.00e-33	133.00
IUUC-Cgl-026723	Colletotrichum gloeosporioides	22.85	2.00e-17	82.80
IUUC-Cne-026836	Cryptococcus neoformans	23.79	2.00e-15	76.30
IUUC-Cme-027295	Cyanidioschyzon merolae	23.13	3.00e-11	62.40
IUUC-Dre-027592	Danio rerio	27.65	1.00e-34	139.00
IUUC-Dno-029880	Dasypus novemcinctus	36.53	6.00e-27	114.00
IUUC-Dor-030266	Dipodomys ordii	36.73	4.00e-25	107.00
IUUC-Dse-031212	Dothistroma septosporum	28.17	6.00e-27	114.00
IUUC-Dme-032209	Drosophila melanogaster	25.07	2.00e-22	99.00
IUUC-Eca-033371	Equus caballus	26.14	1.00e-33	135.00
IUUC-Fca-035558	Felis catus	26.37	2.00e-34	138.00
IUUC-Fal-036794	Ficedula albicollis	31.87	4.00e-41	160.00
IUUC-Gmo-038742	Gadus morhua	27.84	2.00e-35	142.00
IUUC-Ggr-039849	Gaeumannomyces graminis	49.02	1.00e-10	60.50
IUUC-Gga-040868	Gallus gallus	30.49	1.00e-39	156.00
IUUC-Gac-041646	Gasterosteus aculeatus	30.41	1.00e-40	159.00
IUUC-Gma-044269	Glycine max	65.80	2.00e-153	534.00
IUUC-Ggo-044553	Gorilla gorilla	28.19	1.00e-33	135.00
IUUC-Hsa-046217	Homo sapiens	28.46	4.00e-33	134.00
IUUC-Hvu-047647	Hordeum vulgare	54.81	8.00e-122	429.00
IUUC-Itr-048649	Ictidomys tridecemlineatus	28.53	3.00e-32	131.00
IUUC-Lch-050134	Latimeria chalumnae	27.01	1.00e-36	145.00
IUUC-Lpe-051524	Leersia perrieri	47.95	1.00e-97	348.00
IUUC-Loc-051757	Lepisosteus oculatus	33.51	2.00e-24	105.00
IUUC-Laf-053733	Loxodonta africana	26.35	3.00e-29	121.00
IUUC-Mcc-055477	Macaca mulatta	25.86	6.00e-25	107.00
IUUC-Mor-057289	Magnaporthe oryzae	40.85	8.00e-11	60.80
IUUC-Mtr-058616	Medicago truncatula	64.40	1.00e-137	481.00
IUUC-Mga-059637	Meleagris gallopavo	25.59	1.00e-16	79.00
IUUC-Mvi-060385	Microbotryum violaceum	22.51	9.00e-22	97.10
IUUC-Mmr-061675	Microcebus murinus	27.34	1.00e-31	129.00
IUUC-Mdo-062782	Monodelphis domestica	26.90	2.00e-35	141.00
IUUC-Mmu-064058	Mus musculus	29.50	7.00e-40	156.00
IUUC-Mac-065262	Musa acuminata	60.61	7.00e-137	479.00
IUUC-Mpu-066633	Mustela putorius furo	27.19	4.00e-25	108.00
IUUC-Mlu-067333	Myotis lucifugus	30.84	3.00e-28	118.00
IUUC-Nfi-068581	Neosartorya fischeri	25.31	4.00e-25	108.00
IUUC-Ncr-068680	Neurospora crassa	22.72	7.00e-18	84.30
IUUC-Nle-069485	Nomascus leucogenys	29.43	4.00e-32	130.00
IUUC-Oan-073361	Ornithorhynchus anatinus	34.01	4.00e-24	103.00
IUUC-Ocu-073923	Oryctolagus cuniculus	25.99	7.00e-27	114.00
IUUC-Oba-075743	Oryza barthii	48.88	3.00e-105	374.00
IUUC-Obr-076879	Oryza brachyantha	56.76	2.00e-115	407.00
IUUC-Ogl-077813	Oryza glaberrima	55.28	4.00e-119	420.00
IUUC-Ogu-078196	Oryza glumaepatula	48.88	3.00e-105	374.00
IUUC-Oin-080131	Oryza indica	55.01	3.00e-118	417.00
IUUC-Olo-080613	Oryza longistaminata	45.82	5.00e-65	239.00
IUUC-Ome-081912	Oryza meridionalis	50.52	7.00e-108	382.00
IUUC-Oni-082813	Oryza nivara	49.75	4.00e-106	377.00
IUUC-Opu-083663	Oryza punctata	54.86	8.00e-125	439.00
IUUC-Oru-085102	Oryza rufipogon	49.74	5.00e-106	377.00
IUUC-Osa-086204	Oryza sativa	55.01	3.00e-118	417.00
IUUC-Ola-086541	Oryzias latipes	28.17	1.00e-31	129.00
IUUC-Olu-087776	Ostreococcus lucimarinus	34.94	8.00e-19	85.50
IUUC-Oga-088039	Otolemur garnettii	28.08	1.00e-33	135.00
IUUC-Oar-089515	Ovis aries	36.84	8.00e-17	80.10
IUUC-Ptr-091291	Pan troglodytes	28.19	1.00e-33	135.00
IUUC-Pan-092644	Papio anubis	27.56	3.00e-33	134.00
IUUC-Psi-093646	Pelodiscus sinensis	31.19	5.00e-41	160.00
IUUC-Ppa-095698	Physcomitrella patens	41.73	7.00e-83	299.00
IUUC-Pfo-096601	Poecilia formosa	28.97	1.00e-36	145.00
IUUC-Pab-098407	Pongo abelii	28.19	2.00e-33	135.00
IUUC-Pop-099193	Populus trichocarpa	73.25	6.00e-173	598.00
IUUC-Pca-100366	Procavia capensis	26.05	1.00e-28	119.00
IUUC-Ppe-101608	Prunus persica	69.41	3.00e-165	573.00
IUUC-Pva-102775	Pteropus vampyrus	27.70	1.00e-28	119.00
IUUC-Pte-104132	Pyrenophora teres	25.90	9.00e-13	67.40
IUUC-Rno-105626	Rattus norvegicus	27.93	2.00e-35	141.00
IUUC-Sha-106539	Sarcophilus harrisii	29.02	2.00e-33	135.00
IUUC-Sja-107694	Schizosaccharomyces japonicus	24.11	8.00e-21	93.60
IUUC-Spo-108326	Schizosaccharomyces pombe	23.43	5.00e-19	87.80
IUUC-Smo-108756	Selaginella moellendorffii	45.17	3.00e-88	317.00
IUUC-Sit-109771	Setaria italica	54.92	1.00e-128	451.00
IUUC-Sly-111138	Solanum lycopersicum	66.75	1.00e-155	541.00
IUUC-Stu-112425	Solanum tuberosum	67.28	1.00e-156	544.00
IUUC-Sbi-114356	Sorghum bicolor	55.70	9.00e-124	435.00
IUUC-Ssc-115256	Sus scrofa	35.81	9.00e-27	113.00
IUUC-Tgu-116774	Taeniopygia guttata	31.11	6.00e-31	126.00
IUUC-Tru-117900	Takifugu rubripes	35.38	9.00e-30	123.00
IUUC-Tsy-119540	Tarsius syrichta	42.68	2.00e-16	78.60
IUUC-Tni-120252	Tetraodon nigroviridis	28.76	3.00e-39	154.00
IUUC-Tca-121717	Theobroma cacao	72.75	4.00e-170	589.00
IUUC-Tre-122069	Trichoderma reesei	27.25	1.00e-19	90.10
IUUC-Tvi-122673	Trichoderma virens	26.52	1.00e-20	93.20
IUUC-Tae-124163	Triticum aestivum	54.81	2.00e-122	431.00
IUUC-Tme-127222	Tuber melanosporum	25.20	2.00e-20	92.80
IUUC-Ttr-129240	Tursiops truncatus	35.45	1.00e-26	113.00
IUUC-Vda-129913	Verticillium dahliae	22.45	3.00e-14	71.60
IUUC-Xtr-132109	Xenopus tropicalis	28.68	3.00e-38	151.00
IUUC-Xma-133366	Xiphophorus maculatus	28.68	2.00e-36	145.00
IUUC-Zma-135563	Zea mays	49.50	5.00e-106	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence