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Tag Content
UUCD2 ID IUUC-Tsy-119578
UUCD1 version UUC-TaS-00632
Ensembl Protein ID ENSTSYP00000006550.1
UniProt Accession Q6X882; Q6X882_TARSY
Genbank Protein ID AAQ57540.1
Protein Name Recombination activating protein 1
Genbank Nucleotide ID AY249877
Gene Name RAG1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTSYG00000007158.1 ENSTSYT00000007158.1 ENSTSYP00000006550.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 88.78 0.00e+00 1905.00 IUUC-Hsa-045964
E3 activity/RING/RING 85.71 0.00e+00 1841.00 IUUC-Mmu-064297
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Tarsius syrichta
Protein Sequence
(Fasta)
MAVSFPPTLR FSSATEEIQH SHIKFSDWKF KLFRVRSLEK TPEVSPKEKT DSSEGKLSLE 60
QSPAAPDKAG DQEAAPNHRV LKASPKFSKK SHDDRKARGK AVHQAHLRQL CRICGRSLKT 120
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Protein Fasta Sequence


>IUUC-Tsy-119578|E3,RING|Tarsius syrichta
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Nucleotide Sequence
(Fasta)
ATGGCTGTCT CATTCCCACC CACCCTGAGA TTCAGTTCTG CCACAGAGGA AATTCAACAC 60
TCACATATTA AATTTTCAGA TTGGAAATTT AAGCTCTTCA GGGTGAGATC CTTAGAAAAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Tsy-119578|E3,RING|Tarsius syrichta
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF12940--RAG1
PF00097--zf-C3HC4
PF10426--zf-RAG1
SMART

SM00184--RING
Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001206 Ailuropoda melanoleuca 86.77 0.00e+00 1844.00
IUUC-Apl-003271 Anas platyrhynchos 73.96 0.00e+00 1610.00
IUUC-Aca-004400 Anolis carolinensis 71.80 0.00e+00 1576.00
IUUC-Ame-011295 Astyanax mexicanus 59.07 0.00e+00 1211.00
IUUC-Bta-012421 Bos taurus 86.67 0.00e+00 1841.00
IUUC-Cja-019891 Callithrix jacchus 88.40 0.00e+00 1852.00
IUUC-Cfa-020740 Canis familiaris 81.59 0.00e+00 1764.00
IUUC-Cpo-021800 Cavia porcellus 85.71 0.00e+00 1755.00
IUUC-Csa-024203 Chlorocebus sabaeus 87.30 0.00e+00 1648.00
IUUC-Dre-028416 Danio rerio 58.04 0.00e+00 1191.00
IUUC-Dno-029101 Dasypus novemcinctus 86.00 0.00e+00 1811.00
IUUC-Eca-033385 Equus caballus 87.63 0.00e+00 1848.00
IUUC-Fca-036545 Felis catus 86.48 0.00e+00 1842.00
IUUC-Fal-037208 Ficedula albicollis 73.48 0.00e+00 1611.00
IUUC-Gmo-039622 Gadus morhua 54.55 0.00e+00 1162.00
IUUC-Ggr-040084 Gaeumannomyces graminis 35.16 8.00e-08 51.60
IUUC-Gga-041182 Gallus gallus 73.65 0.00e+00 1574.00
IUUC-Gac-041682 Gasterosteus aculeatus 57.83 0.00e+00 1203.00
IUUC-Ggo-044510 Gorilla gorilla 88.69 0.00e+00 1877.00
IUUC-Hsa-045964 Homo sapiens 88.78 0.00e+00 1880.00
IUUC-Itr-048862 Ictidomys tridecemlineatus 87.34 0.00e+00 1838.00
IUUC-Lch-050041 Latimeria chalumnae 68.34 0.00e+00 1437.00
IUUC-Loc-052464 Lepisosteus oculatus 62.64 0.00e+00 1357.00
IUUC-Laf-053544 Loxodonta africana 86.77 0.00e+00 1839.00
IUUC-Mcc-054867 Macaca mulatta 88.49 0.00e+00 1873.00
IUUC-Meu-055986 Macropus eugenii 76.89 0.00e+00 1513.00
IUUC-Mga-059262 Meleagris gallopavo 73.65 0.00e+00 1578.00
IUUC-Mdo-062686 Monodelphis domestica 77.75 0.00e+00 1712.00
IUUC-Mmu-064297 Mus musculus 85.71 0.00e+00 1864.00
IUUC-Mpu-066027 Mustela putorius furo 87.06 0.00e+00 1828.00
IUUC-Mlu-067885 Myotis lucifugus 87.44 0.00e+00 1859.00
IUUC-Nle-070073 Nomascus leucogenys 88.59 0.00e+00 1877.00
IUUC-Ont-071400 Oreochromis niloticus 59.47 0.00e+00 1252.00
IUUC-Oan-072920 Ornithorhynchus anatinus 92.39 0.00e+00 771.00
IUUC-Ocu-074616 Oryctolagus cuniculus 87.44 0.00e+00 1830.00
IUUC-Ola-086828 Oryzias latipes 60.31 0.00e+00 1231.00
IUUC-Oga-088675 Otolemur garnettii 91.51 1.00e-150 524.00
IUUC-Oar-090380 Ovis aries 85.62 0.00e+00 1840.00
IUUC-Ptr-090648 Pan troglodytes 88.78 0.00e+00 1880.00
IUUC-Pan-092036 Papio anubis 88.40 0.00e+00 1870.00
IUUC-Psi-093130 Pelodiscus sinensis 77.22 0.00e+00 1680.00
IUUC-Pfo-097273 Poecilia formosa 59.81 0.00e+00 1203.00
IUUC-Pca-100134 Procavia capensis 81.42 0.00e+00 1708.00
IUUC-Rno-105632 Rattus norvegicus 85.33 0.00e+00 1857.00
IUUC-Sha-107238 Sarcophilus harrisii 77.65 0.00e+00 1708.00
IUUC-Sar-113591 Sorex araneus 76.53 0.00e+00 1590.00
IUUC-Ssc-115720 Sus scrofa 86.58 0.00e+00 1825.00
IUUC-Tgu-117030 Taeniopygia guttata 73.24 0.00e+00 1604.00
IUUC-Tru-117669 Takifugu rubripes 57.37 0.00e+00 1142.00
IUUC-Tni-120073 Tetraodon nigroviridis 58.06 0.00e+00 1194.00
IUUC-Tbe-128029 Tupaia belangeri 79.86 0.00e+00 907.00
IUUC-Ttr-128677 Tursiops truncatus 91.57 0.00e+00 793.00
IUUC-Vpa-130346 Vicugna pacos 92.78 0.00e+00 865.00
IUUC-Xtr-132442 Xenopus tropicalis 83.51 3.00e-98 349.00
IUUC-Xma-133595 Xiphophorus maculatus 60.84 0.00e+00 1222.00
Created Date 25-Jun-2017

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