iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-087274

Ensembl Protein ID

ENSORLP00000011411.1

UniProt Accession

H2LZ39; H2LZ39_ORYLA

Genbank Protein ID

ENSORLP00000011411

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04043496

Gene Name

arpc1a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000009096.1	ENSORLT00000011412.1	ENSORLP00000011411.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-14	52.5	51	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++ +t++++ +  +++v+++ D + +vW+ ++
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKE 83
           9999*******6669**************9655 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIAISPNNH EVHIYKKSGN QWVKTHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKEGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTTCCGT GCGGGCAGCA GTTGATGACA CATTAACGTG AACCAGAAAC TGGCTGAACT 60
GGTTTATTCA CTTGAATGTC ATGATGCTAA GCTAGTTGAT AGCCAGGTAT CCACAGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.48	3.00e-62	232.00
IUUC-Aml-002044	Ailuropoda melanoleuca	87.33	0.00e+00	658.00
IUUC-Apl-003325	Anas platyrhynchos	89.22	0.00e+00	681.00
IUUC-Aca-004736	Anolis carolinensis	88.95	0.00e+00	678.00
IUUC-Aly-005532	Arabidopsis lyrata	41.58	3.00e-79	288.00
IUUC-Ath-006683	Arabidopsis thaliana	41.85	6.00e-79	287.00
IUUC-Acl-008334	Aspergillus clavatus	48.89	1.00e-95	342.00
IUUC-Afl-008485	Aspergillus flavus	48.61	4.00e-91	328.00
IUUC-Afu-008780	Aspergillus fumigatus	48.61	4.00e-96	344.00
IUUC-Ani-009417	Aspergillus nidulans	48.75	7.00e-95	340.00
IUUC-Ang-009543	Aspergillus niger	49.72	6.00e-97	347.00
IUUC-Aor-010234	Aspergillus oryzae	48.89	4.00e-93	334.00
IUUC-Ate-010386	Aspergillus terreus	50.00	6.00e-98	350.00
IUUC-Ame-011852	Astyanax mexicanus	89.49	0.00e+00	679.00
IUUC-Bta-012530	Bos taurus	87.33	0.00e+00	657.00
IUUC-Bci-013616	Botrytis cinerea	46.81	1.00e-90	325.00
IUUC-Bdi-014632	Brachypodium distachyon	41.58	4.00e-78	284.00
IUUC-Bol-016274	Brassica oleracea	42.28	8.00e-81	293.00
IUUC-Bra-016790	Brassica rapa	41.19	9.00e-80	290.00
IUUC-Cel-018122	Caenorhabditis elegans	55.62	3.00e-109	387.00
IUUC-Cja-019362	Callithrix jacchus	87.06	0.00e+00	657.00
IUUC-Cfa-020167	Canis familiaris	87.33	0.00e+00	658.00
IUUC-Cpo-021933	Cavia porcellus	87.33	0.00e+00	659.00
IUUC-Csa-023277	Chlorocebus sabaeus	74.38	4.00e-164	570.00
IUUC-Cho-024449	Choloepus hoffmanni	64.73	1.00e-81	296.00
IUUC-Cin-025186	Ciona intestinalis	54.69	1.00e-113	402.00
IUUC-Csv-026275	Ciona savignyi	55.09	1.00e-110	392.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	46.52	5.00e-91	327.00
IUUC-Cne-026926	Cryptococcus neoformans	47.70	2.00e-97	349.00
IUUC-Dre-028057	Danio rerio	88.95	0.00e+00	675.00
IUUC-Dno-029092	Dasypus novemcinctus	88.37	0.00e+00	648.00
IUUC-Dor-030391	Dipodomys ordii	88.30	0.00e+00	647.00
IUUC-Dme-031907	Drosophila melanogaster	55.99	6.00e-120	423.00
IUUC-Ete-032299	Echinops telfairi	67.22	5.00e-151	526.00
IUUC-Eca-034074	Equus caballus	87.33	0.00e+00	657.00
IUUC-Eeu-035041	Erinaceus europaeus	70.83	3.00e-78	285.00
IUUC-Fca-036154	Felis catus	87.33	0.00e+00	658.00
IUUC-Fal-037279	Ficedula albicollis	89.76	0.00e+00	682.00
IUUC-Fox-037842	Fusarium oxysporum	47.35	2.00e-90	325.00
IUUC-Fso-038276	Fusarium solani	46.80	9.00e-90	323.00
IUUC-Gmo-039673	Gadus morhua	92.45	0.00e+00	659.00
IUUC-Ggr-039762	Gaeumannomyces graminis	45.56	2.00e-88	318.00
IUUC-Gga-040189	Gallus gallus	88.95	0.00e+00	677.00
IUUC-Gac-042531	Gasterosteus aculeatus	94.61	0.00e+00	669.00
IUUC-Gma-042803	Glycine max	42.05	6.00e-79	287.00
IUUC-Ggo-045355	Gorilla gorilla	53.57	3.00e-110	391.00
IUUC-Hsa-046309	Homo sapiens	87.33	0.00e+00	658.00
IUUC-Itr-047864	Ictidomys tridecemlineatus	87.33	0.00e+00	658.00
IUUC-Kpa-049288	Komagataella pastoris	41.82	1.00e-75	276.00
IUUC-Lch-050427	Latimeria chalumnae	86.02	0.00e+00	658.00
IUUC-Lpe-050869	Leersia perrieri	40.66	7.00e-78	283.00
IUUC-Loc-052532	Lepisosteus oculatus	89.01	0.00e+00	669.00
IUUC-Laf-054271	Loxodonta africana	87.33	0.00e+00	658.00
IUUC-Mcc-054857	Macaca mulatta	88.86	0.00e+00	648.00
IUUC-Meu-056540	Macropus eugenii	84.24	2.00e-164	571.00
IUUC-Mor-057167	Magnaporthe oryzae	45.15	3.00e-87	315.00
IUUC-Mtr-057659	Medicago truncatula	42.97	3.00e-80	291.00
IUUC-Mla-058886	Melampsora laricipopulina	44.58	3.00e-91	328.00
IUUC-Mga-059327	Meleagris gallopavo	88.95	0.00e+00	677.00
IUUC-Mvi-060302	Microbotryum violaceum	46.95	1.00e-94	339.00
IUUC-Mmr-060765	Microcebus murinus	88.61	0.00e+00	652.00
IUUC-Mdo-062326	Monodelphis domestica	87.60	0.00e+00	661.00
IUUC-Mmu-063819	Mus musculus	86.79	0.00e+00	656.00
IUUC-Mac-064632	Musa acuminata	40.76	5.00e-79	287.00
IUUC-Mpu-066247	Mustela putorius furo	66.39	2.00e-144	505.00
IUUC-Mlu-067184	Myotis lucifugus	87.33	0.00e+00	659.00
IUUC-Nfi-068383	Neosartorya fischeri	48.89	5.00e-96	344.00
IUUC-Ncr-068777	Neurospora crassa	45.18	1.00e-88	320.00
IUUC-Nle-069900	Nomascus leucogenys	87.33	0.00e+00	657.00
IUUC-Opr-070386	Ochotona princeps	78.71	3.00e-165	574.00
IUUC-Ont-071283	Oreochromis niloticus	94.88	0.00e+00	669.00
IUUC-Oan-073139	Ornithorhynchus anatinus	87.60	0.00e+00	662.00
IUUC-Ocu-074340	Oryctolagus cuniculus	87.33	0.00e+00	658.00
IUUC-Oba-075379	Oryza barthii	41.21	1.00e-77	283.00
IUUC-Obr-076404	Oryza brachyantha	40.82	3.00e-79	288.00
IUUC-Ogl-077409	Oryza glaberrima	38.36	7.00e-71	260.00
IUUC-Ogu-078759	Oryza glumaepatula	41.21	1.00e-77	283.00
IUUC-Oin-079118	Oryza indica	41.10	3.00e-78	285.00
IUUC-Ome-081281	Oryza meridionalis	41.21	1.00e-77	283.00
IUUC-Oni-083043	Oryza nivara	41.21	1.00e-77	283.00
IUUC-Opu-083392	Oryza punctata	32.97	3.00e-55	208.00
IUUC-Oru-084839	Oryza rufipogon	41.21	1.00e-77	283.00
IUUC-Osa-085377	Oryza sativa	41.10	4.00e-78	284.00
IUUC-Oga-088016	Otolemur garnettii	86.79	0.00e+00	655.00
IUUC-Oar-090122	Ovis aries	87.06	0.00e+00	656.00
IUUC-Ptr-091548	Pan troglodytes	87.33	0.00e+00	658.00
IUUC-Pan-091727	Papio anubis	66.67	1.00e-148	519.00
IUUC-Psi-093767	Pelodiscus sinensis	88.95	0.00e+00	681.00
IUUC-Pma-094124	Petromyzon marinus	77.30	3.00e-173	600.00
IUUC-Ppa-095858	Physcomitrella patens	46.76	8.00e-85	307.00
IUUC-Pfo-097107	Poecilia formosa	94.07	0.00e+00	663.00
IUUC-Pab-098238	Pongo abelii	66.39	9.00e-148	516.00
IUUC-Pop-098954	Populus trichocarpa	36.02	1.00e-42	166.00
IUUC-Pva-102908	Pteropus vampyrus	84.81	5.00e-165	573.00
IUUC-Pgr-103309	Puccinia graminis	44.64	3.00e-92	332.00
IUUC-Ptt-103959	Puccinia triticina	45.71	4.00e-95	341.00
IUUC-Pte-104384	Pyrenophora teres	46.80	2.00e-88	318.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	47.35	2.00e-88	319.00
IUUC-Rno-105008	Rattus norvegicus	87.50	1.00e-168	585.00
IUUC-Sce-106411	Saccharomyces cerevisiae	36.48	1.00e-62	233.00
IUUC-Sha-106691	Sarcophilus harrisii	87.50	0.00e+00	656.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	47.09	1.00e-90	326.00
IUUC-Smo-108836	Selaginella moellendorffii	46.45	5.00e-83	301.00
IUUC-Sit-110150	Setaria italica	41.85	2.00e-80	292.00
IUUC-Sly-111048	Solanum lycopersicum	41.37	3.00e-77	281.00
IUUC-Sar-113599	Sorex araneus	78.27	1.00e-159	555.00
IUUC-Sbi-114685	Sorghum bicolor	42.51	2.00e-77	282.00
IUUC-Sre-115090	Sporisorium reilianum	46.08	3.00e-95	342.00
IUUC-Ssc-115851	Sus scrofa	87.60	0.00e+00	659.00
IUUC-Tgu-116701	Taeniopygia guttata	89.76	0.00e+00	682.00
IUUC-Tru-117603	Takifugu rubripes	92.82	0.00e+00	682.00
IUUC-Tsy-119515	Tarsius syrichta	86.11	3.00e-72	265.00
IUUC-Tni-119844	Tetraodon nigroviridis	94.34	0.00e+00	662.00
IUUC-Tca-121645	Theobroma cacao	42.12	4.00e-80	291.00
IUUC-Tre-122045	Trichoderma reesei	46.80	2.00e-89	322.00
IUUC-Tvi-122523	Trichoderma virens	46.67	5.00e-89	320.00
IUUC-Tae-123562	Triticum aestivum	40.92	4.00e-70	258.00
IUUC-Tur-126640	Triticum urartu	39.34	6.00e-68	251.00
IUUC-Tme-127018	Tuber melanosporum	46.15	4.00e-86	310.00
IUUC-Tbe-127321	Tupaia belangeri	88.11	2.00e-169	588.00
IUUC-Ttr-128178	Tursiops truncatus	86.82	4.00e-177	613.00
IUUC-Uma-129423	Ustilago maydis	45.81	1.00e-96	346.00
IUUC-Vvi-131647	Vitis vinifera	42.43	1.00e-79	289.00
IUUC-Xtr-132735	Xenopus tropicalis	80.65	1.00e-171	595.00
IUUC-Xma-133435	Xiphophorus maculatus	94.07	0.00e+00	663.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence