iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074187

Ensembl Protein ID

ENSOCUP00000021063.1

UniProt Accession

G1TVH9; G1TVH9_RABIT

Protein Name

Uncharacterized protein

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000025962.1	ENSOCUT00000024276.1	ENSOCUP00000021063.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-16	57.6	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKNGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAGCCC ATCAGCTGCC ACGCCTGGAA CAAGGACCGC 60
ACCCGTGAGT GGTGGAGTGG GAGCTCCGGG GGCACGCAGC AGCCCTGAGG CCCAGGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.15	9.00e-64	237.00
IUUC-Aml-001709	Ailuropoda melanoleuca	91.76	0.00e+00	695.00
IUUC-Aly-005532	Arabidopsis lyrata	40.38	2.00e-80	292.00
IUUC-Ath-006683	Arabidopsis thaliana	41.46	1.00e-81	296.00
IUUC-Ame-011512	Astyanax mexicanus	77.33	2.00e-180	624.00
IUUC-Bta-012442	Bos taurus	91.11	0.00e+00	689.00
IUUC-Bol-016274	Brassica oleracea	41.40	4.00e-82	298.00
IUUC-Cja-019899	Callithrix jacchus	92.23	0.00e+00	706.00
IUUC-Cfa-020067	Canis familiaris	92.20	0.00e+00	699.00
IUUC-Cpo-022461	Cavia porcellus	92.74	0.00e+00	700.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	34.69	4.00e-35	140.00
IUUC-Csa-023277	Chlorocebus sabaeus	84.68	0.00e+00	655.00
IUUC-Dre-028141	Danio rerio	77.60	4.00e-178	617.00
IUUC-Dor-030559	Dipodomys ordii	91.67	0.00e+00	701.00
IUUC-Ete-032299	Echinops telfairi	90.86	0.00e+00	698.00
IUUC-Eca-033593	Equus caballus	91.42	0.00e+00	697.00
IUUC-Fca-036254	Felis catus	92.74	0.00e+00	702.00
IUUC-Fal-037453	Ficedula albicollis	85.83	0.00e+00	667.00
IUUC-Gmo-038471	Gadus morhua	68.17	3.00e-154	537.00
IUUC-Gga-040898	Gallus gallus	85.75	0.00e+00	669.00
IUUC-Gac-042236	Gasterosteus aculeatus	72.18	7.00e-168	583.00
IUUC-Ggo-045355	Gorilla gorilla	76.68	4.00e-159	553.00
IUUC-Hsa-046623	Homo sapiens	93.28	0.00e+00	705.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	92.74	0.00e+00	707.00
IUUC-Lch-049679	Latimeria chalumnae	77.69	7.00e-177	612.00
IUUC-Lpe-050869	Leersia perrieri	40.95	2.00e-77	282.00
IUUC-Loc-052140	Lepisosteus oculatus	77.60	2.00e-174	605.00
IUUC-Laf-054287	Loxodonta africana	88.83	0.00e+00	671.00
IUUC-Meu-056302	Macropus eugenii	87.10	0.00e+00	682.00
IUUC-Mtr-057659	Medicago truncatula	41.29	1.00e-81	296.00
IUUC-Mga-059279	Meleagris gallopavo	85.75	0.00e+00	671.00
IUUC-Mmr-060752	Microcebus murinus	91.97	0.00e+00	687.00
IUUC-Mdo-062836	Monodelphis domestica	82.53	0.00e+00	637.00
IUUC-Mmu-064099	Mus musculus	91.76	0.00e+00	694.00
IUUC-Mpu-066247	Mustela putorius furo	92.20	0.00e+00	693.00
IUUC-Mlu-067571	Myotis lucifugus	92.47	0.00e+00	706.00
IUUC-Nle-069492	Nomascus leucogenys	79.03	7.00e-162	563.00
IUUC-Opr-070519	Ochotona princeps	98.24	5.00e-134	470.00
IUUC-Ont-071316	Oreochromis niloticus	73.56	7.00e-168	582.00
IUUC-Oan-072692	Ornithorhynchus anatinus	85.75	0.00e+00	674.00
IUUC-Oba-075379	Oryza barthii	41.10	7.00e-78	284.00
IUUC-Obr-076404	Oryza brachyantha	41.48	2.00e-78	286.00
IUUC-Ogl-077409	Oryza glaberrima	38.69	9.00e-72	263.00
IUUC-Ogu-078759	Oryza glumaepatula	41.10	7.00e-78	284.00
IUUC-Oin-079118	Oryza indica	41.14	1.00e-78	286.00
IUUC-Olo-081055	Oryza longistaminata	44.48	4.00e-69	254.00
IUUC-Ome-081281	Oryza meridionalis	41.10	1.00e-77	283.00
IUUC-Oni-083043	Oryza nivara	41.10	7.00e-78	284.00
IUUC-Oru-084839	Oryza rufipogon	41.10	7.00e-78	284.00
IUUC-Osa-085377	Oryza sativa	41.14	1.00e-78	286.00
IUUC-Oga-088610	Otolemur garnettii	93.01	0.00e+00	701.00
IUUC-Oar-089639	Ovis aries	89.76	0.00e+00	671.00
IUUC-Ptr-091023	Pan troglodytes	93.01	0.00e+00	702.00
IUUC-Pan-091727	Papio anubis	93.01	0.00e+00	710.00
IUUC-Pfo-097058	Poecilia formosa	71.92	6.00e-167	579.00
IUUC-Pab-098238	Pongo abelii	93.01	0.00e+00	709.00
IUUC-Pca-100580	Procavia capensis	90.05	0.00e+00	681.00
IUUC-Ppe-101681	Prunus persica	43.06	3.00e-82	298.00
IUUC-Pva-102928	Pteropus vampyrus	89.52	0.00e+00	664.00
IUUC-Rno-104846	Rattus norvegicus	91.94	0.00e+00	696.00
IUUC-Sly-111048	Solanum lycopersicum	42.59	9.00e-78	283.00
IUUC-Sar-113404	Sorex araneus	97.07	2.00e-139	488.00
IUUC-Sbi-114685	Sorghum bicolor	41.71	1.00e-76	280.00
IUUC-Tru-118106	Takifugu rubripes	71.92	6.00e-169	586.00
IUUC-Tni-120079	Tetraodon nigroviridis	73.23	4.00e-171	593.00
IUUC-Tca-121645	Theobroma cacao	43.13	9.00e-80	290.00
IUUC-Tae-123562	Triticum aestivum	40.75	2.00e-70	259.00
IUUC-Tur-126640	Triticum urartu	39.23	4.00e-68	251.00
IUUC-Ttr-128698	Tursiops truncatus	91.94	0.00e+00	697.00
IUUC-Vvi-131647	Vitis vinifera	42.90	2.00e-79	289.00
IUUC-Xtr-131893	Xenopus tropicalis	80.97	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence