iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110856

Ensembl Protein ID

Solyc06g008880.2.1

UniProt Accession

K4C3R8; K4C3R8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g008880.2	Solyc06g008880.2.1	Solyc06g008880.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-25	86.6	252	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v++++f   s++l+ sGsdD+ +kvWD r+
   Q: 252  HNSDVNSVCFadeSGHLIYSGSDDNLCKVWDRRC 285
           ***********766699**************665 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGYSLSKLEV DTGLFDGSSS NHGVASSVHH ERPTNYLDHE ISQLTKLRSG PHENLSRILP 60
GKKEVPVSAF KMLAAREANI SGRGRFSKAD CCHVLSKYLP VSGPWIVDQM ETRAYVSQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTTTGGCA TGGTAGGATC TTGATTATGG ATGATATGAT ATTTCAAGGC GGCTCTCAGA 60
CAATCGCCCT GCACTGTCTT ACATGTGAAA ATGTATTTTG ATTTCTTACA CCCAGAGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017399--DCAF11/LEC14B
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000492	Aegilops tauschii	55.38	1.00e-137	482.00
IUUC-Aml-001732	Ailuropoda melanoleuca	43.08	9.00e-92	330.00
IUUC-Atr-002856	Amborella trichopoda	64.57	4.00e-148	516.00
IUUC-Aca-005081	Anolis carolinensis	41.23	4.00e-93	334.00
IUUC-Aly-006571	Arabidopsis lyrata	72.56	0.00e+00	728.00
IUUC-Ath-007313	Arabidopsis thaliana	72.97	0.00e+00	723.00
IUUC-Acl-008126	Aspergillus clavatus	37.87	3.00e-70	259.00
IUUC-Ani-009456	Aspergillus nidulans	37.86	1.00e-74	273.00
IUUC-Ang-009781	Aspergillus niger	37.63	6.00e-68	251.00
IUUC-Ate-010456	Aspergillus terreus	38.25	6.00e-74	271.00
IUUC-Ame-011825	Astyanax mexicanus	42.59	4.00e-84	304.00
IUUC-Bta-013043	Bos taurus	43.08	1.00e-91	330.00
IUUC-Bdi-014379	Brachypodium distachyon	61.71	2.00e-161	560.00
IUUC-Bol-016186	Brassica oleracea	71.40	0.00e+00	692.00
IUUC-Bra-018035	Brassica rapa	71.07	0.00e+00	688.00
IUUC-Cel-018145	Caenorhabditis elegans	39.06	1.00e-66	246.00
IUUC-Cja-018940	Callithrix jacchus	42.82	8.00e-92	330.00
IUUC-Cfa-020064	Canis familiaris	43.08	1.00e-91	329.00
IUUC-Cpo-022220	Cavia porcellus	41.95	4.00e-92	331.00
IUUC-Cre-022728	Chlamydomonas reinhardtii	47.08	8.00e-62	229.00
IUUC-Csa-023158	Chlorocebus sabaeus	43.33	1.00e-91	330.00
IUUC-Dre-028711	Danio rerio	42.97	4.00e-91	327.00
IUUC-Dno-029851	Dasypus novemcinctus	41.71	2.00e-90	325.00
IUUC-Dor-030952	Dipodomys ordii	42.60	9.00e-88	317.00
IUUC-Dse-031288	Dothistroma septosporum	38.74	1.00e-75	277.00
IUUC-Dme-031925	Drosophila melanogaster	35.37	5.00e-58	218.00
IUUC-Ete-032983	Echinops telfairi	39.75	2.00e-84	305.00
IUUC-Eca-033499	Equus caballus	43.08	1.00e-91	330.00
IUUC-Eeu-035179	Erinaceus europaeus	44.04	4.00e-72	264.00
IUUC-Fca-035615	Felis catus	43.08	1.00e-91	329.00
IUUC-Gmo-038731	Gadus morhua	44.22	8.00e-92	330.00
IUUC-Gac-041615	Gasterosteus aculeatus	42.93	5.00e-89	320.00
IUUC-Gma-043167	Glycine max	69.81	0.00e+00	718.00
IUUC-Hsa-046061	Homo sapiens	43.33	3.00e-92	332.00
IUUC-Itr-048985	Ictidomys tridecemlineatus	43.33	3.00e-92	331.00
IUUC-Lch-050257	Latimeria chalumnae	34.17	4.00e-56	211.00
IUUC-Lpe-051521	Leersia perrieri	61.21	2.00e-152	531.00
IUUC-Laf-054259	Loxodonta africana	43.59	1.00e-92	333.00
IUUC-Mcc-054958	Macaca mulatta	43.33	4.00e-92	331.00
IUUC-Meu-056889	Macropus eugenii	42.82	7.00e-91	327.00
IUUC-Mtr-058464	Medicago truncatula	67.43	0.00e+00	696.00
IUUC-Mmr-061329	Microcebus murinus	39.86	4.00e-88	318.00
IUUC-Mdo-062123	Monodelphis domestica	42.82	5.00e-91	327.00
IUUC-Mmu-063616	Mus musculus	42.93	2.00e-91	328.00
IUUC-Mac-064473	Musa acuminata	64.05	1.00e-169	588.00
IUUC-Mpu-066351	Mustela putorius furo	42.41	8.00e-77	280.00
IUUC-Mlu-067043	Myotis lucifugus	43.33	1.00e-91	330.00
IUUC-Ncr-068715	Neurospora crassa	37.50	3.00e-72	265.00
IUUC-Nle-070052	Nomascus leucogenys	43.44	9.00e-92	330.00
IUUC-Opr-070605	Ochotona princeps	41.69	2.00e-93	335.00
IUUC-Ont-072411	Oreochromis niloticus	42.75	4.00e-88	318.00
IUUC-Ocu-074078	Oryctolagus cuniculus	43.33	6.00e-92	330.00
IUUC-Oba-075609	Oryza barthii	66.19	5.00e-164	569.00
IUUC-Obr-076243	Oryza brachyantha	61.96	8.00e-162	562.00
IUUC-Ogl-077467	Oryza glaberrima	66.19	3.00e-164	570.00
IUUC-Ogu-078264	Oryza glumaepatula	58.92	1.00e-156	545.00
IUUC-Oin-079588	Oryza indica	65.95	1.00e-163	568.00
IUUC-Olo-080362	Oryza longistaminata	56.21	2.00e-145	508.00
IUUC-Ome-081874	Oryza meridionalis	66.19	8.00e-164	569.00
IUUC-Oni-082655	Oryza nivara	66.19	5.00e-164	569.00
IUUC-Opu-084069	Oryza punctata	65.95	3.00e-163	566.00
IUUC-Oru-085209	Oryza rufipogon	66.19	5.00e-164	569.00
IUUC-Osa-086287	Oryza sativa	66.19	3.00e-163	566.00
IUUC-Ola-086329	Oryzias latipes	43.85	2.00e-91	328.00
IUUC-Oga-088779	Otolemur garnettii	41.95	2.00e-91	329.00
IUUC-Oar-089262	Ovis aries	43.08	9.00e-92	330.00
IUUC-Ptr-091346	Pan troglodytes	43.33	3.00e-92	331.00
IUUC-Pan-092716	Papio anubis	43.33	5.00e-92	331.00
IUUC-Pma-094148	Petromyzon marinus	50.79	8.00e-72	262.00
IUUC-Ppa-095260	Physcomitrella patens	63.12	7.00e-164	569.00
IUUC-Pfo-096424	Poecilia formosa	42.30	1.00e-90	326.00
IUUC-Pab-098091	Pongo abelii	41.03	2.00e-82	298.00
IUUC-Pop-099095	Populus trichocarpa	73.26	0.00e+00	720.00
IUUC-Pca-100153	Procavia capensis	43.33	8.00e-92	330.00
IUUC-Ppe-102075	Prunus persica	69.01	0.00e+00	677.00
IUUC-Pva-102598	Pteropus vampyrus	42.82	2.00e-90	325.00
IUUC-Ptt-103861	Puccinia triticina	27.91	5.00e-30	124.00
IUUC-Pyt-104745	Pyrenophora triticirepentis	44.03	1.00e-58	220.00
IUUC-Rno-104890	Rattus norvegicus	41.57	5.00e-92	330.00
IUUC-Sha-106540	Sarcophilus harrisii	42.46	2.00e-89	322.00
IUUC-Smo-109019	Selaginella moellendorffii	56.49	2.00e-131	461.00
IUUC-Sit-110726	Setaria italica	60.35	2.00e-161	561.00
IUUC-Sar-113742	Sorex araneus	42.05	3.00e-89	322.00
IUUC-Sbi-113786	Sorghum bicolor	50.33	9.00e-124	436.00
IUUC-Sre-115073	Sporisorium reilianum	37.35	1.00e-64	240.00
IUUC-Ssc-116019	Sus scrofa	43.59	2.00e-92	332.00
IUUC-Tru-118536	Takifugu rubripes	44.50	6.00e-91	327.00
IUUC-Tsy-119518	Tarsius syrichta	41.47	2.00e-91	328.00
IUUC-Tni-120264	Tetraodon nigroviridis	44.87	4.00e-91	327.00
IUUC-Tca-121554	Theobroma cacao	74.48	0.00e+00	756.00
IUUC-Tae-125890	Triticum aestivum	61.71	1.00e-162	565.00
IUUC-Tur-126714	Triticum urartu	58.21	9.00e-148	515.00
IUUC-Tme-127050	Tuber melanosporum	39.57	5.00e-77	281.00
IUUC-Tbe-127495	Tupaia belangeri	42.20	2.00e-92	332.00
IUUC-Ttr-128553	Tursiops truncatus	42.82	3.00e-91	328.00
IUUC-Vvi-131266	Vitis vinifera	76.47	0.00e+00	772.00
IUUC-Xtr-132525	Xenopus tropicalis	43.19	9.00e-91	326.00
IUUC-Xma-133165	Xiphophorus maculatus	43.19	2.00e-90	325.00
IUUC-Yli-134635	Yarrowia lipolytica	26.58	8.00e-20	91.70
IUUC-Zma-135874	Zea mays	60.57	3.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence