iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016001

Ensembl Protein ID

Bo2g038960.1

UniProt Accession

A0A0D3ALY0; A0A0D3ALY0_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo2g038960	Bo2g038960.1	Bo2g038960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.20e-08	35.6	350	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek...slveCekCrewfHpaClkls 35
            C vC++g+ +++   ++ +C++C + +H +Cl ++
   Q: 350  KCSVCKNGEVKTDsdlQFAVCRRCPKSYHRKCLPRE 385
           6******998776789****************9765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAFIDDDEEE DSVPQSATNY YFEDDDKEPV SFACLPIQWS DKEKVDGSAA GLYLRGTSDD 60
GLLPLHKLVK AWRFDLSNYR PEISVLTKDN VWIKLEKPRK SYAELIRAVL VTVHALRFLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTTA TTGACGATGA CGAAGAGGAA GACTCTGTTC CTCAGTCAGC CACCAATTAC 60
TATTTCGAAG ATGACGATAA GGAACCTGTG TCATTCGCCT GTCTGCCTAT TCAGTGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR022702--Cytosine_MeTrfase1_RFD
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF12047--DNMT1-RFD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0043565--F:sequence-specific DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0050832--P:defense response to fungus
GO:0070829--P:heterochromatin maintenance
GO:0090436--P:leaf pavement cell development
GO:0031937--P:positive regulation of chromatin silencing
GO:0009911--P:positive regulation of flower development
GO:0061087--P:positive regulation of histone H3-K27 methylation
GO:1900111--P:positive regulation of histone H3-K9 dimethylation
GO:0044030--P:regulation of DNA methylation
GO:2000024--P:regulation of leaf development
GO:1900363--P:regulation of mRNA polyadenylation
GO:0007165--P:signal transduction
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000732	Aegilops tauschii	27.09	2.00e-24	105.00
IUUC-Aml-001795	Ailuropoda melanoleuca	29.51	3.00e-16	82.40
IUUC-Atr-002482	Amborella trichopoda	49.00	0.00e+00	688.00
IUUC-Apl-003953	Anas platyrhynchos	28.57	5.00e-16	81.30
IUUC-Aca-004278	Anolis carolinensis	34.57	4.00e-17	84.00
IUUC-Aly-006105	Arabidopsis lyrata	72.13	0.00e+00	1766.00
IUUC-Ath-007426	Arabidopsis thaliana	71.61	0.00e+00	1714.00
IUUC-Ame-011499	Astyanax mexicanus	28.57	3.00e-12	65.90
IUUC-Bta-012966	Bos taurus	29.51	9.00e-17	84.00
IUUC-Bdi-014781	Brachypodium distachyon	48.66	3.00e-59	223.00
IUUC-Bra-017864	Brassica rapa	94.18	0.00e+00	2400.00
IUUC-Cja-018780	Callithrix jacchus	29.51	1.00e-15	80.50
IUUC-Cfa-020975	Canis familiaris	29.51	3.00e-16	82.40
IUUC-Cpo-021331	Cavia porcellus	29.35	2.00e-15	79.30
IUUC-Csa-024226	Chlorocebus sabaeus	30.05	2.00e-16	82.80
IUUC-Cho-024405	Choloepus hoffmanni	30.08	1.00e-11	64.70
IUUC-Csv-026298	Ciona savignyi	29.07	1.00e-11	63.90
IUUC-Dre-028152	Danio rerio	30.72	5.00e-16	80.90
IUUC-Dno-030020	Dasypus novemcinctus	31.25	9.00e-14	72.80
IUUC-Ete-032488	Echinops telfairi	31.68	1.00e-12	69.30
IUUC-Eca-033591	Equus caballus	28.42	2.00e-15	79.00
IUUC-Fca-035791	Felis catus	29.69	2.00e-16	82.80
IUUC-Fal-037378	Ficedula albicollis	28.57	3.00e-16	82.40
IUUC-Gmo-038901	Gadus morhua	32.70	5.00e-15	77.00
IUUC-Gga-040881	Gallus gallus	28.57	5.00e-17	85.10
IUUC-Gma-044054	Glycine max	47.45	0.00e+00	783.00
IUUC-Hsa-046436	Homo sapiens	29.51	7.00e-16	80.90
IUUC-Itr-048194	Ictidomys tridecemlineatus	30.05	1.00e-16	83.60
IUUC-Lch-049684	Latimeria chalumnae	30.43	2.00e-16	82.40
IUUC-Lpe-051201	Leersia perrieri	42.48	2.00e-51	196.00
IUUC-Loc-052581	Lepisosteus oculatus	32.08	4.00e-18	84.70
IUUC-Laf-054046	Loxodonta africana	32.70	4.00e-16	81.60
IUUC-Mcc-055593	Macaca mulatta	30.05	2.00e-16	82.80
IUUC-Meu-056051	Macropus eugenii	32.09	2.00e-11	65.10
IUUC-Mga-059756	Meleagris gallopavo	28.57	1.00e-16	83.20
IUUC-Mmr-061182	Microcebus murinus	29.51	4.00e-16	81.60
IUUC-Mdo-062576	Monodelphis domestica	33.96	1.00e-15	79.00
IUUC-Mmu-063605	Mus musculus	29.51	1.00e-16	84.00
IUUC-Mpu-066446	Mustela putorius furo	29.51	3.00e-16	82.40
IUUC-Mlu-067261	Myotis lucifugus	28.96	4.00e-16	81.60
IUUC-Nle-069818	Nomascus leucogenys	29.51	6.00e-16	80.90
IUUC-Opr-070842	Ochotona princeps	31.37	2.00e-14	76.30
IUUC-Ont-072448	Oreochromis niloticus	31.45	2.00e-15	78.20
IUUC-Oan-073496	Ornithorhynchus anatinus	28.96	4.00e-15	77.80
IUUC-Ocu-074918	Oryctolagus cuniculus	29.51	5.00e-16	81.30
IUUC-Oba-075813	Oryza barthii	41.56	0.00e+00	663.00
IUUC-Obr-076122	Oryza brachyantha	45.40	2.00e-37	148.00
IUUC-Ogl-077641	Oryza glaberrima	46.19	2.00e-56	212.00
IUUC-Ogu-078898	Oryza glumaepatula	46.64	2.00e-56	212.00
IUUC-Oin-079557	Oryza indica	46.64	2.00e-56	212.00
IUUC-Olo-080581	Oryza longistaminata	33.22	3.00e-38	152.00
IUUC-Ome-081770	Oryza meridionalis	46.64	2.00e-56	212.00
IUUC-Oni-082657	Oryza nivara	46.64	1.00e-56	213.00
IUUC-Opu-083479	Oryza punctata	35.14	2.00e-42	166.00
IUUC-Oru-084464	Oryza rufipogon	46.64	3.00e-56	212.00
IUUC-Osa-085353	Oryza sativa	46.64	1.00e-56	213.00
IUUC-Ola-087085	Oryzias latipes	31.45	1.00e-13	72.40
IUUC-Oga-088743	Otolemur garnettii	30.05	2.00e-16	82.80
IUUC-Oar-090265	Ovis aries	29.69	6.00e-17	84.70
IUUC-Ptr-090521	Pan troglodytes	29.51	7.00e-16	80.90
IUUC-Pfo-096416	Poecilia formosa	31.45	5.00e-16	80.90
IUUC-Pab-098644	Pongo abelii	29.51	7.00e-16	80.90
IUUC-Rno-105803	Rattus norvegicus	29.51	6.00e-17	84.30
IUUC-Sha-107494	Sarcophilus harrisii	33.96	1.00e-15	79.00
IUUC-Sly-111281	Solanum lycopersicum	44.77	3.00e-148	518.00
IUUC-Stu-112457	Solanum tuberosum	55.00	1.00e-50	192.00
IUUC-Sar-113402	Sorex araneus	31.37	6.00e-14	74.70
IUUC-Sbi-114581	Sorghum bicolor	39.90	2.00e-35	142.00
IUUC-Ssc-116193	Sus scrofa	29.51	5.00e-16	81.30
IUUC-Tgu-117006	Taeniopygia guttata	34.59	2.00e-15	78.60
IUUC-Tru-118375	Takifugu rubripes	33.33	6.00e-15	77.00
IUUC-Tsy-118830	Tarsius syrichta	29.51	9.00e-16	80.50
IUUC-Tni-120509	Tetraodon nigroviridis	32.70	1.00e-14	76.30
IUUC-Tae-125914	Triticum aestivum	32.00	1.00e-28	119.00
IUUC-Tbe-127291	Tupaia belangeri	31.06	8.00e-13	69.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence