iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098897

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000343

Gene Name

POPTRDRAFT_819789; POPTR_0007s04960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s04960	POPTR_0007s04960.1	POPTR_0007s04960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-07	30.3	147	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f   + +++lp C H+fh  C+  w       + + +CPlCr
   Q: 147  CSVCLSEFqeNESLRLLPkCSHAFHIPCIDTW------LRSHKNCPLCR 189
           ********6544499999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEFDQRKLPR SRMNLYANYK IQLAKGVKHD LDPPIPPSLP VPNNRNPNNG SSTSLIIMAC 60
VFGGAVLLGI LCLVSRLCYN RHQNSRRSRS LPVFFGTQED FLDEDQGTEI NHHIWYINFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTTCCTTG TTCCTTATTT TCCACACACC TAAGATGCAT CTCTATCCCC GGTTTCCTCT 60
GTTTTTGTGA GAGAAAAAAA TGGAGTTTGA TCAAAGAAAA CTACCAAGAT CAAGAATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0007s04960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005829	Arabidopsis lyrata	61.06	3.00e-36	144.00
IUUC-Ath-006749	Arabidopsis thaliana	52.48	2.00e-36	145.00
IUUC-Bol-015095	Brassica oleracea	75.00	4.00e-36	144.00
IUUC-Bra-017929	Brassica rapa	59.83	6.00e-37	147.00
IUUC-Gma-043544	Glycine max	50.00	6.00e-43	167.00
IUUC-Mtr-057999	Medicago truncatula	61.48	2.00e-42	165.00
IUUC-Mga-059307	Meleagris gallopavo	37.84	9.00e-15	75.10
IUUC-Mdo-062162	Monodelphis domestica	38.18	1.00e-14	74.70
IUUC-Ont-072086	Oreochromis niloticus	42.50	5.00e-14	72.80
IUUC-Ppe-101478	Prunus persica	48.86	7.00e-69	253.00
IUUC-Pva-103151	Pteropus vampyrus	44.59	2.00e-13	70.90
IUUC-Sha-106681	Sarcophilus harrisii	38.18	1.00e-14	74.70
IUUC-Sly-111280	Solanum lycopersicum	44.15	6.00e-57	214.00
IUUC-Stu-112147	Solanum tuberosum	44.31	3.00e-56	211.00
IUUC-Sar-113682	Sorex araneus	32.71	3.00e-13	68.20
IUUC-Tru-118302	Takifugu rubripes	36.94	8.00e-15	75.10
IUUC-Tca-120978	Theobroma cacao	49.13	9.00e-74	270.00
IUUC-Uma-129481	Ustilago maydis	52.08	2.00e-10	62.80
IUUC-Vvi-131676	Vitis vinifera	45.17	3.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence